RNA–Protein interactions for RNA: ENST00000463599.5

U2AF1-205, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-205ENST00000463599 CHIC1Q5VXU3 224 aa24.18■■□□□ 1.46
U2AF1-205ENST00000463599 AEBP2Q6ZN18 517 aaPredicted RBP23.97■■□□□ 1.43
U2AF1-205ENST00000463599 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
U2AF1-205ENST00000463599 SENP3Q9H4L4 574 aaPredicted RBP20.3■□□□□ 0.84
U2AF1-205ENST00000463599 PLPPR3Q6T4P5 718 aa19.99■□□□□ 0.79
U2AF1-205ENST00000463599 FOXD1Q16676 465 aa18.71■□□□□ 0.59
U2AF1-205ENST00000463599 ADRA2BP18089 450 aa18.63■□□□□ 0.57
U2AF1-205ENST00000463599 PPP6R1Q9UPN7 881 aa18.57■□□□□ 0.56
U2AF1-205ENST00000463599 KCNA4P22459 653 aa18.07■□□□□ 0.48
U2AF1-205ENST00000463599 PIAS4Q8N2W9 510 aaPredicted RBP17.84■□□□□ 0.45
U2AF1-205ENST00000463599 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
U2AF1-205ENST00000463599 EHMT2Q96KQ7 1210 aa17.68■□□□□ 0.42
U2AF1-205ENST00000463599 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
U2AF1-205ENST00000463599 SLC4A1APQ9BWU0 796 aaKnown RBP17.38■□□□□ 0.37
U2AF1-205ENST00000463599 NPM3O75607 178 aaKnown RBP17.17■□□□□ 0.34
U2AF1-205ENST00000463599 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
U2AF1-205ENST00000463599 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
U2AF1-205ENST00000463599 CNKSR2Q8WXI2 1034 aa17.06■□□□□ 0.32
U2AF1-205ENST00000463599 MSH5O43196 834 aa17.02■□□□□ 0.32
U2AF1-205ENST00000463599 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
U2AF1-205ENST00000463599 ZBTB22O15209 634 aa16.61■□□□□ 0.25
U2AF1-205ENST00000463599 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
U2AF1-205ENST00000463599 RNF216Q9NWF9 866 aaPredicted RBP16.54■□□□□ 0.24
U2AF1-205ENST00000463599 FOXD4L1Q9NU39 408 aa16.45■□□□□ 0.22
U2AF1-205ENST00000463599 POTEDQ86YR6 584 aa16.35■□□□□ 0.21
U2AF1-205ENST00000463599 DMRT2Q9Y5R5 561 aa16.31■□□□□ 0.2
U2AF1-205ENST00000463599 HOXD11P31277 338 aaPredicted RBP16.26■□□□□ 0.19
U2AF1-205ENST00000463599 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
U2AF1-205ENST00000463599 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
U2AF1-205ENST00000463599 ATXN8OSP0DMR3 200 aa15.87■□□□□ 0.13
U2AF1-205ENST00000463599 DCAF8L1A6NGE4 600 aa15.57■□□□□ 0.08
U2AF1-205ENST00000463599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.52■□□□□ 0.08
U2AF1-205ENST00000463599 FKBP8Q14318 412 aa15.47■□□□□ 0.07
U2AF1-205ENST00000463599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.45■□□□□ 0.06
U2AF1-205ENST00000463599 HNRNPUL2Q1KMD3 747 aaKnown RBP15.45■□□□□ 0.06
U2AF1-205ENST00000463599 AMER1Q5JTC6 1135 aaPredicted RBP15.42■□□□□ 0.06
U2AF1-205ENST00000463599 SAMD1Q6SPF0 538 aaPredicted RBP15.4■□□□□ 0.06
U2AF1-205ENST00000463599 RTN4Q9NQC3 1192 aaKnown RBP15.34■□□□□ 0.05
U2AF1-205ENST00000463599 ATF5Q9Y2D1 282 aaPredicted RBP15.34■□□□□ 0.05
U2AF1-205ENST00000463599 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
U2AF1-205ENST00000463599 APLP2Q06481 763 aa15.13■□□□□ 0.01
U2AF1-205ENST00000463599 SLC24A1O60721 1099 aa15.08■□□□□ 0
U2AF1-205ENST00000463599 ZNF219Q9P2Y4 722 aaPredicted RBP15.07■□□□□ 0
U2AF1-205ENST00000463599 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
U2AF1-205ENST00000463599 SPDYE4A6NLX3 237 aa14.79□□□□□ -0.04
U2AF1-205ENST00000463599 FBLN2P98095 1184 aa14.73□□□□□ -0.05
U2AF1-205ENST00000463599 MKRN4PQ13434 485 aaPredicted RBP14.71□□□□□ -0.05
U2AF1-205ENST00000463599 TRHP20396 242 aaPredicted RBP14.7□□□□□ -0.06
U2AF1-205ENST00000463599 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
U2AF1-205ENST00000463599 POLA2Q14181 598 aa14.64□□□□□ -0.07
U2AF1-205ENST00000463599 PROM2Q8N271 834 aa14.62□□□□□ -0.07
U2AF1-205ENST00000463599 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
U2AF1-205ENST00000463599 CAPN15O75808 1086 aa14.6□□□□□ -0.07
U2AF1-205ENST00000463599 C1QBPQ07021 282 aaKnown RBP14.53□□□□□ -0.08
U2AF1-205ENST00000463599 VASPP50552 380 aaPredicted RBP14.51□□□□□ -0.09
U2AF1-205ENST00000463599 ZBTB12Q9Y330 459 aaPredicted RBP14.49□□□□□ -0.09
U2AF1-205ENST00000463599 IFNLR1Q8IU57 520 aaPredicted RBP14.36□□□□□ -0.11
U2AF1-205ENST00000463599 ABCB7O75027 752 aa14.34□□□□□ -0.11
U2AF1-205ENST00000463599 CACNB1Q02641 598 aaPredicted RBP14.28□□□□□ -0.12
U2AF1-205ENST00000463599 PLCB2Q00722 1185 aa14.2□□□□□ -0.14
U2AF1-205ENST00000463599 ZNF692Q9BU19 519 aaPredicted RBP14.2□□□□□ -0.14
U2AF1-205ENST00000463599 DSG3P32926 999 aa14.17□□□□□ -0.14
U2AF1-205ENST00000463599 DCAF8L2P0C7V8 631 aa14.16□□□□□ -0.14
U2AF1-205ENST00000463599 PKD2Q13563 968 aa14.16□□□□□ -0.14
U2AF1-205ENST00000463599 STAG3Q9UJ98 1225 aa14.16□□□□□ -0.14
U2AF1-205ENST00000463599 KLHL34Q8N239 644 aa14.14□□□□□ -0.15
U2AF1-205ENST00000463599 SPDYE2BA6NHP3 402 aa14.13□□□□□ -0.15
U2AF1-205ENST00000463599 SPDYE6P0CI01 402 aa14.13□□□□□ -0.15
U2AF1-205ENST00000463599 SPDYE2Q495Y8 402 aa14.13□□□□□ -0.15
U2AF1-205ENST00000463599 SPOCK2Q92563 424 aa14.11□□□□□ -0.15
U2AF1-205ENST00000463599 SSUH2Q9Y2M2 353 aa14.07□□□□□ -0.16
U2AF1-205ENST00000463599 OSCARQ8IYS5 282 aa14.05□□□□□ -0.16
U2AF1-205ENST00000463599 PLCD3Q8N3E9 789 aa14.02□□□□□ -0.17
U2AF1-205ENST00000463599 PABPN1Q86U42 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
U2AF1-205ENST00000463599 HAP1P54257 671 aaPredicted RBP14□□□□□ -0.17
U2AF1-205ENST00000463599 MIER1Q8N108 512 aa13.98□□□□□ -0.17
U2AF1-205ENST00000463599 ECM2O94769 699 aaPredicted RBP13.97□□□□□ -0.17
U2AF1-205ENST00000463599 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.9□□□□□ -0.18
U2AF1-205ENST00000463599 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
U2AF1-205ENST00000463599 BBXQ8WY36 941 aaPredicted RBP13.89□□□□□ -0.19
U2AF1-205ENST00000463599 ZBTB47Q9UFB7 747 aaPredicted RBP13.86□□□□□ -0.19
U2AF1-205ENST00000463599 VSIG10Q8N0Z9 540 aa13.85□□□□□ -0.19
U2AF1-205ENST00000463599 RGL2O15211 777 aa13.77□□□□□ -0.21
U2AF1-205ENST00000463599 NPM1P06748 294 aaKnown RBP eCLIP13.77□□□□□ -0.21
U2AF1-205ENST00000463599 CIZ1Q9ULV3 898 aaPredicted RBP13.76□□□□□ -0.21
U2AF1-205ENST00000463599 BCANQ96GW7 911 aa13.74□□□□□ -0.21
U2AF1-205ENST00000463599 PAXIP1Q6ZW49 1069 aaPredicted RBP13.73□□□□□ -0.21
U2AF1-205ENST00000463599 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
U2AF1-205ENST00000463599 CFAP44Q96MT7 982 aa13.7□□□□□ -0.22
U2AF1-205ENST00000463599 SPRYD3Q8NCJ5 442 aa13.67□□□□□ -0.22
U2AF1-205ENST00000463599 CHGAP10645 457 aaKnown RBP13.62□□□□□ -0.23
U2AF1-205ENST00000463599 GSE1Q14687 1217 aa13.6□□□□□ -0.23
U2AF1-205ENST00000463599 KDM2AQ9Y2K7 1162 aa13.59□□□□□ -0.23
U2AF1-205ENST00000463599 SPDYE1Q8NFV5 336 aaPredicted RBP13.55□□□□□ -0.24
U2AF1-205ENST00000463599 RBM42Q9BTD8 480 aaKnown RBP13.52□□□□□ -0.25
U2AF1-205ENST00000463599 AKT1S1Q96B36 256 aa13.51□□□□□ -0.25
U2AF1-205ENST00000463599 NUBP1P53384 320 aa13.5□□□□□ -0.25
U2AF1-205ENST00000463599 HS6ST3Q8IZP7 471 aa13.49□□□□□ -0.25
U2AF1-205ENST00000463599 TSHZ2Q9NRE2 1034 aa13.49□□□□□ -0.25
U2AF1-205ENST00000463599 TAOK2Q9UL54 1235 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms