RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 FCGBPQ9Y6R7 5405 aaPredicted RBP8.18□□□□□ -1.1
VPS52-214ENST00000463486 H3BPC8 53 aa8.12□□□□□ -1.11
VPS52-214ENST00000463486 KRTAP19-1Q8IUB9 90 aa8.1□□□□□ -1.11
VPS52-214ENST00000463486 A8MUN3 132 aa8.09□□□□□ -1.11
VPS52-214ENST00000463486 FAM236AA0A1B0GUQ0 79 aa8.04□□□□□ -1.12
VPS52-214ENST00000463486 FAM236BA0A1B0GV22 79 aa8.04□□□□□ -1.12
VPS52-214ENST00000463486 TRAV7A0A075B6U4 112 aa8.01□□□□□ -1.13
VPS52-214ENST00000463486 KRTAP19-6Q3LI70 58 aa8.01□□□□□ -1.13
VPS52-214ENST00000463486 SMIM20Q8N5G0 67 aa8.01□□□□□ -1.13
VPS52-214ENST00000463486 NDUFC1O43677 76 aa7.99□□□□□ -1.13
VPS52-214ENST00000463486 SPRR2GQ9BYE4 73 aa7.99□□□□□ -1.13
VPS52-214ENST00000463486 DMAC1Q96GE9 116 aa7.97□□□□□ -1.13
VPS52-214ENST00000463486 H0YAA0 97 aa7.95□□□□□ -1.14
VPS52-214ENST00000463486 KRTAP19-8Q3LI54 63 aa7.92□□□□□ -1.14
VPS52-214ENST00000463486 MT1BP07438 61 aa7.9□□□□□ -1.14
VPS52-214ENST00000463486 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.89□□□□□ -1.15
VPS52-214ENST00000463486 CRIPTQ9P021 101 aa7.86□□□□□ -1.15
VPS52-214ENST00000463486 ADM2Q7Z4H4 148 aa7.82□□□□□ -1.16
VPS52-214ENST00000463486 SNURFQ9Y675 71 aa7.82□□□□□ -1.16
VPS52-214ENST00000463486 MACF1Q9UPN3 7388 aaKnown RBP7.82□□□□□ -1.16
VPS52-214ENST00000463486 SERP2Q8N6R1 65 aa7.81□□□□□ -1.16
VPS52-214ENST00000463486 Q5VV11 94 aa7.8□□□□□ -1.16
VPS52-214ENST00000463486 SYNE2Q8WXH0 6885 aaKnown RBP7.78□□□□□ -1.16
VPS52-214ENST00000463486 ACYP2P14621 99 aa7.76□□□□□ -1.17
VPS52-214ENST00000463486 C20orf197Q8N268 126 aa7.76□□□□□ -1.17
VPS52-214ENST00000463486 KRTAP3-2Q9BYR7 98 aa7.75□□□□□ -1.17
VPS52-214ENST00000463486 P0C880 135 aa7.73□□□□□ -1.17
VPS52-214ENST00000463486 KRTAP9-7A8MTY7 169 aa7.7□□□□□ -1.18
VPS52-214ENST00000463486 SPANXA2-OT1Q8N9U9 137 aa7.7□□□□□ -1.18
VPS52-214ENST00000463486 KRTAP10-5P60370 271 aa7.65□□□□□ -1.18
VPS52-214ENST00000463486 SPTSSBQ8NFR3 76 aa7.65□□□□□ -1.18
VPS52-214ENST00000463486 CHKB-CPT1BH3BT56 60 aa7.64□□□□□ -1.19
VPS52-214ENST00000463486 A6NN06 94 aa7.63□□□□□ -1.19
VPS52-214ENST00000463486 COX7CP15954 63 aa7.63□□□□□ -1.19
VPS52-214ENST00000463486 R4GN34 69 aa7.57□□□□□ -1.2
VPS52-214ENST00000463486 CYSTM1Q9H1C7 97 aa7.56□□□□□ -1.2
VPS52-214ENST00000463486 M0QZ58 72 aa7.54□□□□□ -1.2
VPS52-214ENST00000463486 H7BZZ5 65 aa7.51□□□□□ -1.21
VPS52-214ENST00000463486 MT1XP80297 61 aa7.46□□□□□ -1.22
VPS52-214ENST00000463486 KRTAP6-3Q3LI67 103 aa7.46□□□□□ -1.22
VPS52-214ENST00000463486 COA5Q86WW8 74 aa7.46□□□□□ -1.22
VPS52-214ENST00000463486 ANAPC13Q9BS18 74 aa7.45□□□□□ -1.22
VPS52-214ENST00000463486 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
VPS52-214ENST00000463486 LINC01554Q52M75 96 aa7.39□□□□□ -1.23
VPS52-214ENST00000463486 KMT2DO14686 5537 aa7.37□□□□□ -1.23
VPS52-214ENST00000463486 MUC12Q9UKN1 5478 aa7.35□□□□□ -1.23
VPS52-214ENST00000463486 CCDC179H3BU77 68 aa7.34□□□□□ -1.23
VPS52-214ENST00000463486 KRTAP13-4Q3LI77 160 aa7.34□□□□□ -1.23
VPS52-214ENST00000463486 PRO2289Q9P1D8 64 aa7.34□□□□□ -1.23
VPS52-214ENST00000463486 NEBP20929 6669 aa7.3□□□□□ -1.24
VPS52-214ENST00000463486 SEC61GP60059 68 aa7.27□□□□□ -1.25
VPS52-214ENST00000463486 SERP1Q9Y6X1 66 aa7.24□□□□□ -1.25
VPS52-214ENST00000463486 KRTAP5-9P26371 169 aa7.23□□□□□ -1.25
VPS52-214ENST00000463486 MDN1Q9NU22 5596 aa7.22□□□□□ -1.25
VPS52-214ENST00000463486 KRTAP12-2P59991 146 aa7.21□□□□□ -1.26
VPS52-214ENST00000463486 ATP5EP56381 51 aaPredicted RBP7.14□□□□□ -1.27
VPS52-214ENST00000463486 A0A1B0GU33 70 aa7.11□□□□□ -1.27
VPS52-214ENST00000463486 KRTAP10-7P60409 375 aaPredicted RBP7.11□□□□□ -1.27
VPS52-214ENST00000463486 SPATA8Q6RVD6 105 aa7.09□□□□□ -1.27
VPS52-214ENST00000463486 KRTAP10-12P60413 245 aa7.08□□□□□ -1.28
VPS52-214ENST00000463486 KRTAP4-8A0A0G2JLE6 195 aa7.07□□□□□ -1.28
VPS52-214ENST00000463486 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
VPS52-214ENST00000463486 A0A1B0GU69 56 aa7.06□□□□□ -1.28
VPS52-214ENST00000463486 TMEM258P61165 79 aa7.03□□□□□ -1.28
VPS52-214ENST00000463486 A0A0D9SG42 100 aa7.02□□□□□ -1.29
VPS52-214ENST00000463486 KRTAP8-1Q8IUC2 63 aa7.02□□□□□ -1.29
VPS52-214ENST00000463486 CAMK2N1Q7Z7J9 78 aa7.01□□□□□ -1.29
VPS52-214ENST00000463486 SPRR2FQ96RM1 72 aa6.99□□□□□ -1.29
VPS52-214ENST00000463486 KRTAP12-1P59990 96 aa6.96□□□□□ -1.3
VPS52-214ENST00000463486 PRR15LQ9BU68 103 aa6.95□□□□□ -1.3
VPS52-214ENST00000463486 SPINT4Q6UDR6 99 aa6.92□□□□□ -1.3
VPS52-214ENST00000463486 LINC01558Q9Y6Z2 57 aa6.92□□□□□ -1.3
VPS52-214ENST00000463486 SMIM26A0A096LP01 95 aa6.9□□□□□ -1.3
VPS52-214ENST00000463486 A8MU10 97 aa6.89□□□□□ -1.31
VPS52-214ENST00000463486 LCE1AQ5T7P2 110 aa6.84□□□□□ -1.31
VPS52-214ENST00000463486 SPRR2EP22531 72 aa6.82□□□□□ -1.32
VPS52-214ENST00000463486 SPRR2BP35325 72 aa6.82□□□□□ -1.32
VPS52-214ENST00000463486 SPRR2AP35326 72 aa6.82□□□□□ -1.32
VPS52-214ENST00000463486 KRTAP20-1Q3LI63 56 aa6.75□□□□□ -1.33
VPS52-214ENST00000463486 UQCR11O14957 56 aa6.7□□□□□ -1.34
VPS52-214ENST00000463486 KRTAP19-7Q3SYF9 63 aa6.68□□□□□ -1.34
VPS52-214ENST00000463486 C10orf95Q9H7T3 257 aa6.67□□□□□ -1.34
VPS52-214ENST00000463486 KRTAP2-3P0C7H8 128 aa6.66□□□□□ -1.34
VPS52-214ENST00000463486 KRTAP2-4Q9BYR9 128 aa6.66□□□□□ -1.34
VPS52-214ENST00000463486 V9GYY9 64 aa6.65□□□□□ -1.34
VPS52-214ENST00000463486 Q1T7F1 81 aa6.61□□□□□ -1.35
VPS52-214ENST00000463486 MT1EP04732 61 aa6.59□□□□□ -1.35
VPS52-214ENST00000463486 SPRR2DP22532 72 aa6.59□□□□□ -1.35
VPS52-214ENST00000463486 PCP4P48539 62 aa6.56□□□□□ -1.36
VPS52-214ENST00000463486 MIR22HGQ0VDD5 57 aa6.56□□□□□ -1.36
VPS52-214ENST00000463486 PSPHP1O15172 72 aa6.55□□□□□ -1.36
VPS52-214ENST00000463486 KRTAP19-5Q3LI72 72 aa6.52□□□□□ -1.37
VPS52-214ENST00000463486 TNP1P09430 55 aa6.5□□□□□ -1.37
VPS52-214ENST00000463486 LCE5AQ5TCM9 118 aa6.49□□□□□ -1.37
VPS52-214ENST00000463486 LCE3AQ5TA76 89 aa6.47□□□□□ -1.37
VPS52-214ENST00000463486 KRTAP19-3Q7Z4W3 81 aa6.46□□□□□ -1.38
VPS52-214ENST00000463486 KRTAP2-2Q9BYT5 123 aa6.46□□□□□ -1.38
VPS52-214ENST00000463486 KRTAP2-1Q9BYU5 128 aa6.46□□□□□ -1.38
VPS52-214ENST00000463486 K7ERS5 55 aa6.45□□□□□ -1.38
VPS52-214ENST00000463486 RPS28P62857 69 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms