RNA–Protein interactions for RNA: ENST00000463094.5

MSH5-210, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-210ENST00000463094 KRTAP3-3Q9BYR6 98 aa8.95□□□□□ -0.98
MSH5-210ENST00000463094 A0A087WVE0 104 aa8.94□□□□□ -0.98
MSH5-210ENST00000463094 IMUPQ9GZP8 106 aa8.94□□□□□ -0.98
MSH5-210ENST00000463094 A6NN06 94 aa8.93□□□□□ -0.98
MSH5-210ENST00000463094 MP68P56378 58 aa8.91□□□□□ -0.98
MSH5-210ENST00000463094 CRIPTQ9P021 101 aa8.91□□□□□ -0.98
MSH5-210ENST00000463094 A8MUN3 132 aa8.89□□□□□ -0.99
MSH5-210ENST00000463094 LINC00208Q96KT6 92 aa8.89□□□□□ -0.99
MSH5-210ENST00000463094 KRTAP19-8Q3LI54 63 aa8.88□□□□□ -0.99
MSH5-210ENST00000463094 MT1BP07438 61 aa8.87□□□□□ -0.99
MSH5-210ENST00000463094 J3QR89 54 aa8.84□□□□□ -0.99
MSH5-210ENST00000463094 SYNE2Q8WXH0 6885 aaKnown RBP8.84□□□□□ -1
MSH5-210ENST00000463094 KRTAP6-3Q3LI67 103 aa8.83□□□□□ -1
MSH5-210ENST00000463094 A0A1B0GV90 55 aa8.82□□□□□ -1
MSH5-210ENST00000463094 H0YAA0 97 aa8.79□□□□□ -1
MSH5-210ENST00000463094 OCR1Q9BZK8 76 aa8.78□□□□□ -1
MSH5-210ENST00000463094 SCGB1A1P11684 91 aa8.76□□□□□ -1.01
MSH5-210ENST00000463094 ADM2Q7Z4H4 148 aa8.73□□□□□ -1.01
MSH5-210ENST00000463094 H3BPC8 53 aa8.72□□□□□ -1.01
MSH5-210ENST00000463094 KRTAP10-5P60370 271 aa8.72□□□□□ -1.01
MSH5-210ENST00000463094 C20orf197Q8N268 126 aa8.63□□□□□ -1.03
MSH5-210ENST00000463094 DMAC1Q96GE9 116 aa8.57□□□□□ -1.04
MSH5-210ENST00000463094 R4GN34 69 aa8.57□□□□□ -1.04
MSH5-210ENST00000463094 PLAC4Q8WY50 150 aa8.55□□□□□ -1.04
MSH5-210ENST00000463094 PRO2289Q9P1D8 64 aa8.55□□□□□ -1.04
MSH5-210ENST00000463094 M0QZ58 72 aa8.47□□□□□ -1.05
MSH5-210ENST00000463094 SMIM20Q8N5G0 67 aa8.47□□□□□ -1.05
MSH5-210ENST00000463094 TRAV7A0A075B6U4 112 aa8.44□□□□□ -1.06
MSH5-210ENST00000463094 P0C880 135 aa8.44□□□□□ -1.06
MSH5-210ENST00000463094 ACYP2P14621 99 aa8.44□□□□□ -1.06
MSH5-210ENST00000463094 K7ERU9 68 aa8.43□□□□□ -1.06
MSH5-210ENST00000463094 SPTSSBQ8NFR3 76 aa8.43□□□□□ -1.06
MSH5-210ENST00000463094 MT-ATP8P03928 68 aa8.38□□□□□ -1.07
MSH5-210ENST00000463094 LINC01554Q52M75 96 aa8.38□□□□□ -1.07
MSH5-210ENST00000463094 KRTAP5-9P26371 169 aa8.37□□□□□ -1.07
MSH5-210ENST00000463094 CHKB-CPT1BH3BT56 60 aa8.35□□□□□ -1.07
MSH5-210ENST00000463094 MT1XP80297 61 aa8.32□□□□□ -1.08
MSH5-210ENST00000463094 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
MSH5-210ENST00000463094 NEBP20929 6669 aa8.28□□□□□ -1.08
MSH5-210ENST00000463094 KRTAP20-1Q3LI63 56 aa8.24□□□□□ -1.09
MSH5-210ENST00000463094 MUC12Q9UKN1 5478 aa8.23□□□□□ -1.09
MSH5-210ENST00000463094 SNURFQ9Y675 71 aa8.22□□□□□ -1.09
MSH5-210ENST00000463094 SPRR2FQ96RM1 72 aa8.21□□□□□ -1.1
MSH5-210ENST00000463094 KRTAP8-1Q8IUC2 63 aa8.2□□□□□ -1.1
MSH5-210ENST00000463094 KRTAP12-2P59991 146 aa8.17□□□□□ -1.1
MSH5-210ENST00000463094 KMT2DO14686 5537 aa8.14□□□□□ -1.11
MSH5-210ENST00000463094 SPANXA2-OT1Q8N9U9 137 aa8.13□□□□□ -1.11
MSH5-210ENST00000463094 SPRR2EP22531 72 aa8.1□□□□□ -1.11
MSH5-210ENST00000463094 SPRR2BP35325 72 aa8.1□□□□□ -1.11
MSH5-210ENST00000463094 SPRR2AP35326 72 aa8.1□□□□□ -1.11
MSH5-210ENST00000463094 SERP2Q8N6R1 65 aa8.1□□□□□ -1.11
MSH5-210ENST00000463094 MDN1Q9NU22 5596 aa8.03□□□□□ -1.12
MSH5-210ENST00000463094 KRTAP2-3P0C7H8 128 aa8.01□□□□□ -1.13
MSH5-210ENST00000463094 KRTAP2-4Q9BYR9 128 aa8.01□□□□□ -1.13
MSH5-210ENST00000463094 KRTAP4-8A0A0G2JLE6 195 aa7.96□□□□□ -1.14
MSH5-210ENST00000463094 KRTAP4-8Q9BYQ9 185 aa7.96□□□□□ -1.14
MSH5-210ENST00000463094 KRTAP10-7P60409 375 aaPredicted RBP7.95□□□□□ -1.14
MSH5-210ENST00000463094 SEC61GP60059 68 aa7.94□□□□□ -1.14
MSH5-210ENST00000463094 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
MSH5-210ENST00000463094 KRTAP10-12P60413 245 aa7.91□□□□□ -1.14
MSH5-210ENST00000463094 LCE1AQ5T7P2 110 aa7.91□□□□□ -1.14
MSH5-210ENST00000463094 COA5Q86WW8 74 aa7.91□□□□□ -1.14
MSH5-210ENST00000463094 SERP1Q9Y6X1 66 aa7.9□□□□□ -1.14
MSH5-210ENST00000463094 SPRR2DP22532 72 aa7.84□□□□□ -1.15
MSH5-210ENST00000463094 KRTAP13-4Q3LI77 160 aa7.83□□□□□ -1.16
MSH5-210ENST00000463094 COX7CP15954 63 aa7.82□□□□□ -1.16
MSH5-210ENST00000463094 KRTAP2-2Q9BYT5 123 aa7.75□□□□□ -1.17
MSH5-210ENST00000463094 KRTAP2-1Q9BYU5 128 aa7.75□□□□□ -1.17
MSH5-210ENST00000463094 A0A0D9SG42 100 aa7.74□□□□□ -1.17
MSH5-210ENST00000463094 A0A1B0GU33 70 aa7.7□□□□□ -1.18
MSH5-210ENST00000463094 H7BZZ5 65 aa7.67□□□□□ -1.18
MSH5-210ENST00000463094 SPATA8Q6RVD6 105 aa7.66□□□□□ -1.18
MSH5-210ENST00000463094 SPINT4Q6UDR6 99 aa7.66□□□□□ -1.18
MSH5-210ENST00000463094 LCE3BQ5TA77 95 aa7.61□□□□□ -1.19
MSH5-210ENST00000463094 A0A1B0GU69 56 aa7.59□□□□□ -1.19
MSH5-210ENST00000463094 CYSTM1Q9H1C7 97 aa7.59□□□□□ -1.19
MSH5-210ENST00000463094 ANAPC13Q9BS18 74 aa7.57□□□□□ -1.2
MSH5-210ENST00000463094 SMIM26A0A096LP01 95 aa7.52□□□□□ -1.21
MSH5-210ENST00000463094 KRTAP12-1P59990 96 aa7.49□□□□□ -1.21
MSH5-210ENST00000463094 KRTAP19-7Q3SYF9 63 aa7.41□□□□□ -1.22
MSH5-210ENST00000463094 PRR15LQ9BU68 103 aa7.41□□□□□ -1.22
MSH5-210ENST00000463094 MT1EP04732 61 aa7.39□□□□□ -1.23
MSH5-210ENST00000463094 ATP5EP56381 51 aaPredicted RBP7.38□□□□□ -1.23
MSH5-210ENST00000463094 KRTAP19-3Q7Z4W3 81 aa7.37□□□□□ -1.23
MSH5-210ENST00000463094 A8MU10 97 aa7.35□□□□□ -1.23
MSH5-210ENST00000463094 LCE5AQ5TCM9 118 aa7.35□□□□□ -1.23
MSH5-210ENST00000463094 CCDC179H3BU77 68 aa7.33□□□□□ -1.24
MSH5-210ENST00000463094 KRTAP19-5Q3LI72 72 aa7.28□□□□□ -1.24
MSH5-210ENST00000463094 TNP1P09430 55 aa7.26□□□□□ -1.25
MSH5-210ENST00000463094 PP632Q6XCG6 107 aa7.25□□□□□ -1.25
MSH5-210ENST00000463094 MT1GP13640 62 aa7.21□□□□□ -1.26
MSH5-210ENST00000463094 LINC01558Q9Y6Z2 57 aa7.17□□□□□ -1.26
MSH5-210ENST00000463094 C10orf95Q9H7T3 257 aa7.14□□□□□ -1.27
MSH5-210ENST00000463094 TMEM258P61165 79 aa7.13□□□□□ -1.27
MSH5-210ENST00000463094 LCE3AQ5TA76 89 aa7.12□□□□□ -1.27
MSH5-210ENST00000463094 DSTQ03001 7570 aaKnown RBP7.1□□□□□ -1.27
MSH5-210ENST00000463094 UQCR11O14957 56 aa7.1□□□□□ -1.27
MSH5-210ENST00000463094 MT1LQ93083 61 aa7.06□□□□□ -1.28
MSH5-210ENST00000463094 MT1MQ8N339 61 aa7.04□□□□□ -1.28
MSH5-210ENST00000463094 KRTAP4-9Q9BYQ8 210 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms