RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 SCGB1A1P11684 91 aa8.45□□□□□ -1.06
CDKN1A-206ENST00000462537 KRTAP19-6Q3LI70 58 aa8.45□□□□□ -1.06
CDKN1A-206ENST00000462537 FCGBPQ9Y6R7 5405 aaPredicted RBP8.41□□□□□ -1.06
CDKN1A-206ENST00000462537 A8MUN3 132 aa8.41□□□□□ -1.06
CDKN1A-206ENST00000462537 NDUFC1O43677 76 aa8.41□□□□□ -1.06
CDKN1A-206ENST00000462537 H3BPC8 53 aa8.37□□□□□ -1.07
CDKN1A-206ENST00000462537 K7ERU9 68 aa8.35□□□□□ -1.07
CDKN1A-206ENST00000462537 KRTAP9-7A8MTY7 169 aa8.34□□□□□ -1.07
CDKN1A-206ENST00000462537 IMUPQ9GZP8 106 aa8.34□□□□□ -1.07
CDKN1A-206ENST00000462537 SPRR2GQ9BYE4 73 aa8.33□□□□□ -1.08
CDKN1A-206ENST00000462537 MT-ATP8P03928 68 aa8.32□□□□□ -1.08
CDKN1A-206ENST00000462537 Q5VV11 94 aa8.31□□□□□ -1.08
CDKN1A-206ENST00000462537 CRIPTQ9P021 101 aa8.27□□□□□ -1.09
CDKN1A-206ENST00000462537 H0YAA0 97 aa8.25□□□□□ -1.09
CDKN1A-206ENST00000462537 KRTAP19-8Q3LI54 63 aa8.25□□□□□ -1.09
CDKN1A-206ENST00000462537 MT1BP07438 61 aa8.24□□□□□ -1.09
CDKN1A-206ENST00000462537 DMAC1Q96GE9 116 aa8.22□□□□□ -1.09
CDKN1A-206ENST00000462537 ADM2Q7Z4H4 148 aa8.21□□□□□ -1.1
CDKN1A-206ENST00000462537 SMIM20Q8N5G0 67 aa8.21□□□□□ -1.1
CDKN1A-206ENST00000462537 TRAV7A0A075B6U4 112 aa8.19□□□□□ -1.1
CDKN1A-206ENST00000462537 A6NN06 94 aa8.16□□□□□ -1.1
CDKN1A-206ENST00000462537 MACF1Q9UPN3 7388 aaKnown RBP8.14□□□□□ -1.11
CDKN1A-206ENST00000462537 ACYP2P14621 99 aa8.06□□□□□ -1.12
CDKN1A-206ENST00000462537 KRTAP10-5P60370 271 aa8.04□□□□□ -1.12
CDKN1A-206ENST00000462537 C20orf197Q8N268 126 aa8.04□□□□□ -1.12
CDKN1A-206ENST00000462537 SNURFQ9Y675 71 aa8.04□□□□□ -1.12
CDKN1A-206ENST00000462537 P0C880 135 aa8.02□□□□□ -1.13
CDKN1A-206ENST00000462537 R4GN34 69 aa8.01□□□□□ -1.13
CDKN1A-206ENST00000462537 SPTSSBQ8NFR3 76 aa7.97□□□□□ -1.13
CDKN1A-206ENST00000462537 CHKB-CPT1BH3BT56 60 aa7.95□□□□□ -1.14
CDKN1A-206ENST00000462537 M0QZ58 72 aa7.95□□□□□ -1.14
CDKN1A-206ENST00000462537 KRTAP6-3Q3LI67 103 aa7.95□□□□□ -1.14
CDKN1A-206ENST00000462537 SERP2Q8N6R1 65 aa7.95□□□□□ -1.14
CDKN1A-206ENST00000462537 KRTAP3-2Q9BYR7 98 aa7.94□□□□□ -1.14
CDKN1A-206ENST00000462537 SYNE2Q8WXH0 6885 aaKnown RBP7.93□□□□□ -1.14
CDKN1A-206ENST00000462537 PLAC4Q8WY50 150 aa7.91□□□□□ -1.14
CDKN1A-206ENST00000462537 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
CDKN1A-206ENST00000462537 LINC01554Q52M75 96 aa7.86□□□□□ -1.15
CDKN1A-206ENST00000462537 PRO2289Q9P1D8 64 aa7.83□□□□□ -1.16
CDKN1A-206ENST00000462537 MT1XP80297 61 aa7.77□□□□□ -1.17
CDKN1A-206ENST00000462537 COX7CP15954 63 aa7.74□□□□□ -1.17
CDKN1A-206ENST00000462537 COA5Q86WW8 74 aa7.68□□□□□ -1.18
CDKN1A-206ENST00000462537 KRTAP5-9P26371 169 aa7.62□□□□□ -1.19
CDKN1A-206ENST00000462537 CYSTM1Q9H1C7 97 aa7.58□□□□□ -1.2
CDKN1A-206ENST00000462537 H7BZZ5 65 aa7.57□□□□□ -1.2
CDKN1A-206ENST00000462537 KRTAP12-2P59991 146 aa7.55□□□□□ -1.2
CDKN1A-206ENST00000462537 ANAPC13Q9BS18 74 aa7.55□□□□□ -1.2
CDKN1A-206ENST00000462537 SEC61GP60059 68 aa7.54□□□□□ -1.2
CDKN1A-206ENST00000462537 KRTAP13-4Q3LI77 160 aa7.53□□□□□ -1.2
CDKN1A-206ENST00000462537 SERP1Q9Y6X1 66 aa7.51□□□□□ -1.21
CDKN1A-206ENST00000462537 MUC12Q9UKN1 5478 aa7.51□□□□□ -1.21
CDKN1A-206ENST00000462537 KRTAP8-1Q8IUC2 63 aa7.5□□□□□ -1.21
CDKN1A-206ENST00000462537 SPRR2FQ96RM1 72 aa7.49□□□□□ -1.21
CDKN1A-206ENST00000462537 KMT2DO14686 5537 aa7.47□□□□□ -1.21
CDKN1A-206ENST00000462537 NEBP20929 6669 aa7.44□□□□□ -1.22
CDKN1A-206ENST00000462537 KRTAP10-7P60409 375 aaPredicted RBP7.44□□□□□ -1.22
CDKN1A-206ENST00000462537 KRTAP4-8A0A0G2JLE6 195 aa7.4□□□□□ -1.22
CDKN1A-206ENST00000462537 CAMK2N1Q7Z7J9 78 aa7.4□□□□□ -1.22
CDKN1A-206ENST00000462537 KRTAP4-8Q9BYQ9 185 aa7.4□□□□□ -1.22
CDKN1A-206ENST00000462537 A0A0D9SG42 100 aa7.38□□□□□ -1.23
CDKN1A-206ENST00000462537 CCDC179H3BU77 68 aa7.38□□□□□ -1.23
CDKN1A-206ENST00000462537 KRTAP10-12P60413 245 aa7.37□□□□□ -1.23
CDKN1A-206ENST00000462537 A0A1B0GU33 70 aa7.36□□□□□ -1.23
CDKN1A-206ENST00000462537 SPATA8Q6RVD6 105 aa7.36□□□□□ -1.23
CDKN1A-206ENST00000462537 SPRR2EP22531 72 aa7.35□□□□□ -1.23
CDKN1A-206ENST00000462537 SPRR2BP35325 72 aa7.35□□□□□ -1.23
CDKN1A-206ENST00000462537 SPRR2AP35326 72 aa7.35□□□□□ -1.23
CDKN1A-206ENST00000462537 KRTAP20-1Q3LI63 56 aa7.34□□□□□ -1.23
CDKN1A-206ENST00000462537 MDN1Q9NU22 5596 aa7.32□□□□□ -1.24
CDKN1A-206ENST00000462537 A0A1B0GU69 56 aa7.3□□□□□ -1.24
CDKN1A-206ENST00000462537 ATP5EP56381 51 aaPredicted RBP7.26□□□□□ -1.25
CDKN1A-206ENST00000462537 SPINT4Q6UDR6 99 aa7.26□□□□□ -1.25
CDKN1A-206ENST00000462537 LCE1AQ5T7P2 110 aa7.23□□□□□ -1.25
CDKN1A-206ENST00000462537 SMIM26A0A096LP01 95 aa7.17□□□□□ -1.26
CDKN1A-206ENST00000462537 KRTAP12-1P59990 96 aa7.17□□□□□ -1.26
CDKN1A-206ENST00000462537 KRTAP2-3P0C7H8 128 aa7.16□□□□□ -1.26
CDKN1A-206ENST00000462537 KRTAP2-4Q9BYR9 128 aa7.16□□□□□ -1.26
CDKN1A-206ENST00000462537 PRR15LQ9BU68 103 aa7.14□□□□□ -1.27
CDKN1A-206ENST00000462537 SPRR2DP22532 72 aa7.11□□□□□ -1.27
CDKN1A-206ENST00000462537 TMEM258P61165 79 aa7.11□□□□□ -1.27
CDKN1A-206ENST00000462537 A8MU10 97 aa7.1□□□□□ -1.27
CDKN1A-206ENST00000462537 LINC01558Q9Y6Z2 57 aa7.04□□□□□ -1.28
CDKN1A-206ENST00000462537 KRTAP2-2Q9BYT5 123 aa6.94□□□□□ -1.3
CDKN1A-206ENST00000462537 KRTAP2-1Q9BYU5 128 aa6.94□□□□□ -1.3
CDKN1A-206ENST00000462537 KRTAP19-7Q3SYF9 63 aa6.93□□□□□ -1.3
CDKN1A-206ENST00000462537 MT1EP04732 61 aa6.89□□□□□ -1.31
CDKN1A-206ENST00000462537 LCE3BQ5TA77 95 aa6.89□□□□□ -1.31
CDKN1A-206ENST00000462537 UQCR11O14957 56 aa6.88□□□□□ -1.31
CDKN1A-206ENST00000462537 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
CDKN1A-206ENST00000462537 TNP1P09430 55 aa6.83□□□□□ -1.32
CDKN1A-206ENST00000462537 KRTAP19-5Q3LI72 72 aa6.83□□□□□ -1.32
CDKN1A-206ENST00000462537 KRTAP19-3Q7Z4W3 81 aa6.8□□□□□ -1.32
CDKN1A-206ENST00000462537 LCE5AQ5TCM9 118 aa6.79□□□□□ -1.32
CDKN1A-206ENST00000462537 MIR22HGQ0VDD5 57 aa6.74□□□□□ -1.33
CDKN1A-206ENST00000462537 LCE3AQ5TA76 89 aa6.74□□□□□ -1.33
CDKN1A-206ENST00000462537 V9GYY9 64 aa6.72□□□□□ -1.33
CDKN1A-206ENST00000462537 PSPHP1O15172 72 aa6.68□□□□□ -1.34
CDKN1A-206ENST00000462537 MT1GP13640 62 aa6.66□□□□□ -1.34
CDKN1A-206ENST00000462537 Q1T7F1 81 aa6.65□□□□□ -1.34
CDKN1A-206ENST00000462537 PP632Q6XCG6 107 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms