RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
NPHP1-209ENST00000461707 CDC42SE1Q9NRR8 79 aa3.88□□□□□ -1.79
NPHP1-209ENST00000461707 Q5VSD8 79 aa3.87□□□□□ -1.79
NPHP1-209ENST00000461707 A0A1B0GU69 56 aa3.86□□□□□ -1.79
NPHP1-209ENST00000461707 A6NN06 94 aa3.86□□□□□ -1.79
NPHP1-209ENST00000461707 MT1HL1P0DM35 61 aa3.84□□□□□ -1.79
NPHP1-209ENST00000461707 HERC1Q15751 4861 aa3.84□□□□□ -1.79
NPHP1-209ENST00000461707 ATP11AUNQ6ZP68 121 aa3.84□□□□□ -1.8
NPHP1-209ENST00000461707 ADM2Q7Z4H4 148 aa3.82□□□□□ -1.8
NPHP1-209ENST00000461707 KRTAP4-5Q9BYR2 181 aa3.81□□□□□ -1.8
NPHP1-209ENST00000461707 HMCN2Q8NDA2 5059 aa3.79□□□□□ -1.8
NPHP1-209ENST00000461707 XP32Q5T750 250 aa3.78□□□□□ -1.8
NPHP1-209ENST00000461707 SPATA8Q6RVD6 105 aa3.78□□□□□ -1.8
NPHP1-209ENST00000461707 MIR22HGQ0VDD5 57 aa3.77□□□□□ -1.81
NPHP1-209ENST00000461707 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
NPHP1-209ENST00000461707 H0YAA0 97 aa3.77□□□□□ -1.81
NPHP1-209ENST00000461707 MUC2Q02817 5179 aa3.76□□□□□ -1.81
NPHP1-209ENST00000461707 KTN1-AS1Q86SY8 53 aa3.75□□□□□ -1.81
NPHP1-209ENST00000461707 UQCR11O14957 56 aa3.75□□□□□ -1.81
NPHP1-209ENST00000461707 COX6B2Q6YFQ2 88 aa3.74□□□□□ -1.81
NPHP1-209ENST00000461707 RPL37P61927 97 aaKnown RBP3.73□□□□□ -1.81
NPHP1-209ENST00000461707 PCLOQ9Y6V0 5065 aa3.73□□□□□ -1.81
NPHP1-209ENST00000461707 RBM12B-AS1Q9P1G2 102 aa3.71□□□□□ -1.82
NPHP1-209ENST00000461707 KRTAP13-4Q3LI77 160 aa3.69□□□□□ -1.82
NPHP1-209ENST00000461707 SEC61GP60059 68 aa3.69□□□□□ -1.82
NPHP1-209ENST00000461707 KRTAP10-6P60371 365 aaPredicted RBP3.69□□□□□ -1.82
NPHP1-209ENST00000461707 A0A1B0GU33 70 aa3.68□□□□□ -1.82
NPHP1-209ENST00000461707 H3BS24 57 aa3.68□□□□□ -1.82
NPHP1-209ENST00000461707 H1FX-AS1Q4G0G2 97 aa3.67□□□□□ -1.82
NPHP1-209ENST00000461707 P0C880 135 aa3.65□□□□□ -1.83
NPHP1-209ENST00000461707 CRIPTQ9P021 101 aa3.62□□□□□ -1.83
NPHP1-209ENST00000461707 KRTAP4-1Q9BYQ7 146 aa3.61□□□□□ -1.83
NPHP1-209ENST00000461707 S4R3F8 94 aa3.61□□□□□ -1.83
NPHP1-209ENST00000461707 A0A0D9SG42 100 aa3.61□□□□□ -1.83
NPHP1-209ENST00000461707 CSAG1Q6PB30 78 aa3.61□□□□□ -1.83
NPHP1-209ENST00000461707 TPRXLQ17RH7 258 aa3.58□□□□□ -1.84
NPHP1-209ENST00000461707 FAT4Q6V0I7 4981 aa3.55□□□□□ -1.84
NPHP1-209ENST00000461707 LCE2BO14633 110 aa3.54□□□□□ -1.84
NPHP1-209ENST00000461707 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
NPHP1-209ENST00000461707 LORP23490 312 aaPredicted RBP3.52□□□□□ -1.85
NPHP1-209ENST00000461707 RNF213Q63HN8 5207 aa3.51□□□□□ -1.85
NPHP1-209ENST00000461707 LCE2CQ5TA81 110 aa3.5□□□□□ -1.85
NPHP1-209ENST00000461707 UBR4Q5T4S7 5183 aa3.49□□□□□ -1.85
NPHP1-209ENST00000461707 LINC01554Q52M75 96 aa3.48□□□□□ -1.85
NPHP1-209ENST00000461707 C10orf95Q9H7T3 257 aa3.47□□□□□ -1.85
NPHP1-209ENST00000461707 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
NPHP1-209ENST00000461707 KRTAP25-1Q3LHN0 102 aa3.46□□□□□ -1.86
NPHP1-209ENST00000461707 SPINT4Q6UDR6 99 aa3.45□□□□□ -1.86
NPHP1-209ENST00000461707 ROMO1P60602 79 aa3.43□□□□□ -1.86
NPHP1-209ENST00000461707 K7ERS5 55 aa3.4□□□□□ -1.86
NPHP1-209ENST00000461707 SEC61BP60468 96 aaKnown RBP3.4□□□□□ -1.86
NPHP1-209ENST00000461707 M0QZ58 72 aa3.4□□□□□ -1.87
NPHP1-209ENST00000461707 R4GN34 69 aa3.35□□□□□ -1.87
NPHP1-209ENST00000461707 SPRR2GQ9BYE4 73 aa3.26□□□□□ -1.89
NPHP1-209ENST00000461707 KRTAP9-8Q9BYQ0 159 aa3.24□□□□□ -1.89
NPHP1-209ENST00000461707 KRTAP19-1Q8IUB9 90 aa3.23□□□□□ -1.89
NPHP1-209ENST00000461707 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
NPHP1-209ENST00000461707 MT1HP80294 61 aa3.19□□□□□ -1.9
NPHP1-209ENST00000461707 KRTAP23-1A1A580 65 aa3.19□□□□□ -1.9
NPHP1-209ENST00000461707 KRTAP19-8Q3LI54 63 aa3.19□□□□□ -1.9
NPHP1-209ENST00000461707 KRTAP15-1Q3LI76 137 aa3.18□□□□□ -1.9
NPHP1-209ENST00000461707 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
NPHP1-209ENST00000461707 SPRR5A0A1B0GTR4 108 aa3.16□□□□□ -1.9
NPHP1-209ENST00000461707 MT1FP04733 61 aa3.15□□□□□ -1.9
NPHP1-209ENST00000461707 USH2AO75445 5202 aa3.14□□□□□ -1.91
NPHP1-209ENST00000461707 M0R2T5 61 aa3.13□□□□□ -1.91
NPHP1-209ENST00000461707 MT2AP02795 61 aa3.12□□□□□ -1.91
NPHP1-209ENST00000461707 LCE2AQ5TA79 106 aaPredicted RBP3.11□□□□□ -1.91
NPHP1-209ENST00000461707 KRTAP9-3Q9BYQ3 159 aa3.1□□□□□ -1.91
NPHP1-209ENST00000461707 NDUFAF8A1L188 74 aa3.09□□□□□ -1.92
NPHP1-209ENST00000461707 KRTAP10-10P60014 251 aa3.08□□□□□ -1.92
NPHP1-209ENST00000461707 MT1BP07438 61 aa3.07□□□□□ -1.92
NPHP1-209ENST00000461707 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
NPHP1-209ENST00000461707 KMT2DO14686 5537 aa3.04□□□□□ -1.92
NPHP1-209ENST00000461707 KRTAP10-5P60370 271 aa3.04□□□□□ -1.92
NPHP1-209ENST00000461707 PLAC4Q8WY50 150 aa3.04□□□□□ -1.92
NPHP1-209ENST00000461707 MT1XP80297 61 aa3.01□□□□□ -1.93
NPHP1-209ENST00000461707 TNP1P09430 55 aa3□□□□□ -1.93
NPHP1-209ENST00000461707 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
NPHP1-209ENST00000461707 KRTAP10-12P60413 245 aa2.95□□□□□ -1.94
NPHP1-209ENST00000461707 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
NPHP1-209ENST00000461707 FSIP2Q5CZC0 6907 aa2.93□□□□□ -1.94
NPHP1-209ENST00000461707 KRTAP10-7P60409 375 aaPredicted RBP2.93□□□□□ -1.94
NPHP1-209ENST00000461707 KRTAP8-1Q8IUC2 63 aa2.91□□□□□ -1.94
NPHP1-209ENST00000461707 LCE3BQ5TA77 95 aa2.84□□□□□ -1.95
NPHP1-209ENST00000461707 KRTAP4-8A0A0G2JLE6 195 aa2.82□□□□□ -1.96
NPHP1-209ENST00000461707 KRTAP4-8Q9BYQ9 185 aa2.82□□□□□ -1.96
NPHP1-209ENST00000461707 LOC100996750A0A140TA64 210 aa2.82□□□□□ -1.96
NPHP1-209ENST00000461707 KRTAP4-6Q9BYQ5 205 aa2.82□□□□□ -1.96
NPHP1-209ENST00000461707 KRTAP9-6A0A140TA67 174 aa2.8□□□□□ -1.96
NPHP1-209ENST00000461707 KRTAP12-3P60328 96 aa2.78□□□□□ -1.96
NPHP1-209ENST00000461707 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
NPHP1-209ENST00000461707 KRTAP19-5Q3LI72 72 aa2.76□□□□□ -1.97
NPHP1-209ENST00000461707 KRTAP19-7Q3SYF9 63 aa2.74□□□□□ -1.97
NPHP1-209ENST00000461707 KRTAP19-6Q3LI70 58 aa2.74□□□□□ -1.97
NPHP1-209ENST00000461707 KRTAP9-2Q9BYQ4 174 aa2.73□□□□□ -1.97
NPHP1-209ENST00000461707 KRTAP4-7Q9BYR0 210 aa2.7□□□□□ -1.98
NPHP1-209ENST00000461707 KRTAP19-4Q3LI73 84 aa2.7□□□□□ -1.98
NPHP1-209ENST00000461707 PRO2289Q9P1D8 64 aa2.7□□□□□ -1.98
NPHP1-209ENST00000461707 FCGBPQ9Y6R7 5405 aaPredicted RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms