RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 LINC00208Q96KT6 92 aa7.08□□□□□ -1.28
VARS-219ENST00000461328 OCR1Q9BZK8 76 aa7.05□□□□□ -1.28
VARS-219ENST00000461328 KRTAP3-3Q9BYR6 98 aa7.03□□□□□ -1.28
VARS-219ENST00000461328 K7ERU9 68 aa7.02□□□□□ -1.29
VARS-219ENST00000461328 SCGB1A1P11684 91 aa7.02□□□□□ -1.29
VARS-219ENST00000461328 MACF1Q9UPN3 7388 aaKnown RBP7□□□□□ -1.29
VARS-219ENST00000461328 KLKP1Q107X0 134 aa7□□□□□ -1.29
VARS-219ENST00000461328 A8MUN3 132 aa6.99□□□□□ -1.29
VARS-219ENST00000461328 NDUFC1O43677 76 aa6.99□□□□□ -1.29
VARS-219ENST00000461328 SYNE2Q8WXH0 6885 aaKnown RBP6.96□□□□□ -1.3
VARS-219ENST00000461328 PCP4P48539 62 aa6.96□□□□□ -1.3
VARS-219ENST00000461328 H3BPC8 53 aa6.94□□□□□ -1.3
VARS-219ENST00000461328 IMUPQ9GZP8 106 aa6.94□□□□□ -1.3
VARS-219ENST00000461328 Q5VV11 94 aa6.91□□□□□ -1.3
VARS-219ENST00000461328 SPRR2GQ9BYE4 73 aa6.9□□□□□ -1.3
VARS-219ENST00000461328 MT-ATP8P03928 68 aa6.88□□□□□ -1.31
VARS-219ENST00000461328 MT1BP07438 61 aa6.88□□□□□ -1.31
VARS-219ENST00000461328 KRTAP19-8Q3LI54 63 aa6.86□□□□□ -1.31
VARS-219ENST00000461328 CRIPTQ9P021 101 aa6.86□□□□□ -1.31
VARS-219ENST00000461328 H0YAA0 97 aa6.85□□□□□ -1.31
VARS-219ENST00000461328 A6NN06 94 aa6.84□□□□□ -1.31
VARS-219ENST00000461328 ADM2Q7Z4H4 148 aa6.83□□□□□ -1.32
VARS-219ENST00000461328 DMAC1Q96GE9 116 aa6.82□□□□□ -1.32
VARS-219ENST00000461328 SMIM20Q8N5G0 67 aa6.81□□□□□ -1.32
VARS-219ENST00000461328 KRTAP6-3Q3LI67 103 aa6.8□□□□□ -1.32
VARS-219ENST00000461328 TRAV7A0A075B6U4 112 aa6.78□□□□□ -1.32
VARS-219ENST00000461328 KRTAP10-5P60370 271 aa6.73□□□□□ -1.33
VARS-219ENST00000461328 C20orf197Q8N268 126 aa6.71□□□□□ -1.34
VARS-219ENST00000461328 ACYP2P14621 99 aa6.69□□□□□ -1.34
VARS-219ENST00000461328 SNURFQ9Y675 71 aa6.66□□□□□ -1.34
VARS-219ENST00000461328 R4GN34 69 aa6.66□□□□□ -1.34
VARS-219ENST00000461328 P0C880 135 aa6.65□□□□□ -1.34
VARS-219ENST00000461328 CHKB-CPT1BH3BT56 60 aa6.63□□□□□ -1.35
VARS-219ENST00000461328 SPTSSBQ8NFR3 76 aa6.63□□□□□ -1.35
VARS-219ENST00000461328 M0QZ58 72 aa6.62□□□□□ -1.35
VARS-219ENST00000461328 SERP2Q8N6R1 65 aa6.59□□□□□ -1.35
VARS-219ENST00000461328 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
VARS-219ENST00000461328 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
VARS-219ENST00000461328 NEBP20929 6669 aa6.56□□□□□ -1.36
VARS-219ENST00000461328 LINC01554Q52M75 96 aa6.54□□□□□ -1.36
VARS-219ENST00000461328 SPANXA2-OT1Q8N9U9 137 aa6.53□□□□□ -1.36
VARS-219ENST00000461328 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
VARS-219ENST00000461328 KRTAP5-9P26371 169 aa6.47□□□□□ -1.37
VARS-219ENST00000461328 MT1XP80297 61 aa6.45□□□□□ -1.38
VARS-219ENST00000461328 COX7CP15954 63 aa6.42□□□□□ -1.38
VARS-219ENST00000461328 MUC12Q9UKN1 5478 aa6.42□□□□□ -1.38
VARS-219ENST00000461328 COA5Q86WW8 74 aa6.38□□□□□ -1.39
VARS-219ENST00000461328 KMT2DO14686 5537 aa6.34□□□□□ -1.39
VARS-219ENST00000461328 KRTAP20-1Q3LI63 56 aa6.33□□□□□ -1.4
VARS-219ENST00000461328 ANAPC13Q9BS18 74 aa6.33□□□□□ -1.4
VARS-219ENST00000461328 SPRR2FQ96RM1 72 aa6.31□□□□□ -1.4
VARS-219ENST00000461328 KRTAP12-2P59991 146 aa6.29□□□□□ -1.4
VARS-219ENST00000461328 KRTAP8-1Q8IUC2 63 aa6.29□□□□□ -1.4
VARS-219ENST00000461328 H7BZZ5 65 aa6.28□□□□□ -1.4
VARS-219ENST00000461328 MDN1Q9NU22 5596 aa6.27□□□□□ -1.41
VARS-219ENST00000461328 SEC61GP60059 68 aa6.27□□□□□ -1.41
VARS-219ENST00000461328 CYSTM1Q9H1C7 97 aa6.27□□□□□ -1.41
VARS-219ENST00000461328 SERP1Q9Y6X1 66 aa6.26□□□□□ -1.41
VARS-219ENST00000461328 KRTAP13-4Q3LI77 160 aa6.24□□□□□ -1.41
VARS-219ENST00000461328 SPRR2EP22531 72 aa6.23□□□□□ -1.41
VARS-219ENST00000461328 SPRR2BP35325 72 aa6.23□□□□□ -1.41
VARS-219ENST00000461328 SPRR2AP35326 72 aa6.23□□□□□ -1.41
VARS-219ENST00000461328 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
VARS-219ENST00000461328 KRTAP4-8Q9BYQ9 185 aa6.18□□□□□ -1.42
VARS-219ENST00000461328 KRTAP10-7P60409 375 aaPredicted RBP6.17□□□□□ -1.42
VARS-219ENST00000461328 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
VARS-219ENST00000461328 KRTAP2-3P0C7H8 128 aa6.15□□□□□ -1.42
VARS-219ENST00000461328 KRTAP2-4Q9BYR9 128 aa6.15□□□□□ -1.42
VARS-219ENST00000461328 CCDC179H3BU77 68 aa6.14□□□□□ -1.43
VARS-219ENST00000461328 A0A0D9SG42 100 aa6.13□□□□□ -1.43
VARS-219ENST00000461328 A0A1B0GU33 70 aa6.11□□□□□ -1.43
VARS-219ENST00000461328 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
VARS-219ENST00000461328 LCE1AQ5T7P2 110 aa6.11□□□□□ -1.43
VARS-219ENST00000461328 SPATA8Q6RVD6 105 aa6.1□□□□□ -1.43
VARS-219ENST00000461328 ATP5EP56381 51 aaPredicted RBP6.09□□□□□ -1.43
VARS-219ENST00000461328 A0A1B0GU69 56 aa6.07□□□□□ -1.44
VARS-219ENST00000461328 SPINT4Q6UDR6 99 aa6.04□□□□□ -1.44
VARS-219ENST00000461328 SPRR2DP22532 72 aa6.02□□□□□ -1.45
VARS-219ENST00000461328 TMEM258P61165 79 aa6.01□□□□□ -1.45
VARS-219ENST00000461328 SMIM26A0A096LP01 95 aa5.96□□□□□ -1.46
VARS-219ENST00000461328 KRTAP12-1P59990 96 aa5.95□□□□□ -1.46
VARS-219ENST00000461328 KRTAP2-2Q9BYT5 123 aa5.95□□□□□ -1.46
VARS-219ENST00000461328 KRTAP2-1Q9BYU5 128 aa5.95□□□□□ -1.46
VARS-219ENST00000461328 PRR15LQ9BU68 103 aa5.94□□□□□ -1.46
VARS-219ENST00000461328 RPS28P62857 69 aaKnown RBP5.9□□□□□ -1.46
VARS-219ENST00000461328 V9GYY9 64 aa5.9□□□□□ -1.46
VARS-219ENST00000461328 A8MU10 97 aa5.89□□□□□ -1.47
VARS-219ENST00000461328 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
VARS-219ENST00000461328 LINC01558Q9Y6Z2 57 aa5.83□□□□□ -1.48
VARS-219ENST00000461328 PRO0628Q9UI54 55 aa5.82□□□□□ -1.48
VARS-219ENST00000461328 KRTAP19-7Q3SYF9 63 aa5.75□□□□□ -1.49
VARS-219ENST00000461328 MT1EP04732 61 aa5.71□□□□□ -1.5
VARS-219ENST00000461328 UQCR11O14957 56 aa5.7□□□□□ -1.5
VARS-219ENST00000461328 TNP1P09430 55 aa5.68□□□□□ -1.5
VARS-219ENST00000461328 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
VARS-219ENST00000461328 KRTAP19-3Q7Z4W3 81 aa5.68□□□□□ -1.5
VARS-219ENST00000461328 C10orf95Q9H7T3 257 aa5.67□□□□□ -1.5
VARS-219ENST00000461328 KRTAP19-5Q3LI72 72 aa5.66□□□□□ -1.5
VARS-219ENST00000461328 Q1T7F1 81 aa5.62□□□□□ -1.51
VARS-219ENST00000461328 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 221.8 ms