RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 UQCR10Q9UDW1 63 aa1.04□□□□□ -2.24
CLK1-206ENST00000461326 HMCN2Q8NDA2 5059 aa1.03□□□□□ -2.24
CLK1-206ENST00000461326 LRP2P98164 4655 aa1.03□□□□□ -2.24
CLK1-206ENST00000461326 IGLV5-48A0A075B6I7 105 aa1.03□□□□□ -2.24
CLK1-206ENST00000461326 A0A1B0GV72 72 aa1.03□□□□□ -2.24
CLK1-206ENST00000461326 F8W1H4 67 aa1.03□□□□□ -2.24
CLK1-206ENST00000461326 SNCGO76070 127 aa1.03□□□□□ -2.24
CLK1-206ENST00000461326 DNAL4O96015 105 aa1.03□□□□□ -2.24
CLK1-206ENST00000461326 SMIM6P0DI80 62 aa1.03□□□□□ -2.24
CLK1-206ENST00000461326 FABP2P12104 132 aa1.03□□□□□ -2.24
CLK1-206ENST00000461326 COX7CP15954 63 aa1.03□□□□□ -2.24
CLK1-206ENST00000461326 SPRR1BP22528 89 aa1.03□□□□□ -2.24
CLK1-206ENST00000461326 CLEC2BQ92478 149 aa1.03□□□□□ -2.24
CLK1-206ENST00000461326 LIMD2Q9BT23 127 aa1.03□□□□□ -2.24
CLK1-206ENST00000461326 SNHG12Q9BXW3 62 aa1.03□□□□□ -2.24
CLK1-206ENST00000461326 PRO1854Q9UHT4 67 aa1.03□□□□□ -2.24
CLK1-206ENST00000461326 LOC105371267A0A1B0GV96 52 aa1.02□□□□□ -2.25
CLK1-206ENST00000461326 C9orf92A6NGG3 77 aa1.02□□□□□ -2.25
CLK1-206ENST00000461326 TSTD3H0UI37 97 aa1.02□□□□□ -2.25
CLK1-206ENST00000461326 H0YGX0 51 aa1.02□□□□□ -2.25
CLK1-206ENST00000461326 H3BUT2 72 aa1.02□□□□□ -2.25
CLK1-206ENST00000461326 COX6CP09669 75 aa1.02□□□□□ -2.25
CLK1-206ENST00000461326 RPS29P62273 56 aaKnown RBP1.02□□□□□ -2.25
CLK1-206ENST00000461326 OCIAD2Q56VL3 154 aa1.02□□□□□ -2.25
CLK1-206ENST00000461326 PRR15Q8IV56 129 aa1.02□□□□□ -2.25
CLK1-206ENST00000461326 TRBV7-7A0A0K0K1E9 115 aa1.01□□□□□ -2.25
CLK1-206ENST00000461326 A0A1B0GX51 115 aa1.01□□□□□ -2.25
CLK1-206ENST00000461326 hDV103S1A0JD37 113 aa1.01□□□□□ -2.25
CLK1-206ENST00000461326 H3BMG7 143 aa1.01□□□□□ -2.25
CLK1-206ENST00000461326 M0R143 59 aa1.01□□□□□ -2.25
CLK1-206ENST00000461326 Q6JHZ5 121 aa1.01□□□□□ -2.25
CLK1-206ENST00000461326 PPDPFLQ8WWR9 84 aa1.01□□□□□ -2.25
CLK1-206ENST00000461326 UBR4Q5T4S7 5183 aa1□□□□□ -2.25
CLK1-206ENST00000461326 CCKP06307 115 aa1□□□□□ -2.25
CLK1-206ENST00000461326 ATXN8Q156A1 80 aa1□□□□□ -2.25
CLK1-206ENST00000461326 VPS25Q9BRG1 176 aa1□□□□□ -2.25
CLK1-206ENST00000461326 MUC17Q685J3 4493 aa0.99□□□□□ -2.25
CLK1-206ENST00000461326 C9JAW5 83 aa0.99□□□□□ -2.25
CLK1-206ENST00000461326 TRACP01848 142 aa0.99□□□□□ -2.25
CLK1-206ENST00000461326 RBM3P98179 157 aaKnown RBP0.99□□□□□ -2.25
CLK1-206ENST00000461326 Q5XG85 94 aa0.99□□□□□ -2.25
CLK1-206ENST00000461326 DSCR8Q96T75 97 aa0.99□□□□□ -2.25
CLK1-206ENST00000461326 RNF213Q63HN8 5207 aa0.99□□□□□ -2.25
CLK1-206ENST00000461326 TRBV20-1A0A075B6N2 111 aa0.98□□□□□ -2.25
CLK1-206ENST00000461326 TRBV7-4A0A0J9YYF1 115 aa0.98□□□□□ -2.25
CLK1-206ENST00000461326 A0A1W2PPM0 123 aa0.98□□□□□ -2.25
CLK1-206ENST00000461326 ASB16-AS1Q495Z4 193 aa0.98□□□□□ -2.25
CLK1-206ENST00000461326 Q96NJ1 140 aa0.98□□□□□ -2.25
CLK1-206ENST00000461326 SPCS1Q9Y6A9 102 aa0.98□□□□□ -2.25
CLK1-206ENST00000461326 JMJD7-PLA2G4BH0Y9G9 81 aa0.97□□□□□ -2.25
CLK1-206ENST00000461326 RPL37P61927 97 aaKnown RBP0.97□□□□□ -2.25
CLK1-206ENST00000461326 COL5A1-AS1Q5SY13 56 aa0.97□□□□□ -2.25
CLK1-206ENST00000461326 ATP11AUNQ6ZP68 121 aa0.97□□□□□ -2.25
CLK1-206ENST00000461326 MUC2Q02817 5179 aa0.97□□□□□ -2.25
CLK1-206ENST00000461326 K7EP34 96 aa0.96□□□□□ -2.26
CLK1-206ENST00000461326 NDUFB1O75438 58 aa0.96□□□□□ -2.26
CLK1-206ENST00000461326 PDE6GP18545 87 aa0.96□□□□□ -2.26
CLK1-206ENST00000461326 NREPQ16612 68 aa0.96□□□□□ -2.26
CLK1-206ENST00000461326 GTF2H5Q6ZYL4 71 aa0.96□□□□□ -2.26
CLK1-206ENST00000461326 LINC00472Q9H8W2 130 aa0.96□□□□□ -2.26
CLK1-206ENST00000461326 FLGP20930 4061 aaPredicted RBP0.95□□□□□ -2.26
CLK1-206ENST00000461326 J3KT08 172 aa0.95□□□□□ -2.26
CLK1-206ENST00000461326 COX6B2Q6YFQ2 88 aa0.95□□□□□ -2.26
CLK1-206ENST00000461326 K7EQZ3 153 aa0.94□□□□□ -2.26
CLK1-206ENST00000461326 M0R2T5 61 aa0.94□□□□□ -2.26
CLK1-206ENST00000461326 ETDBQ3ZM63 59 aa0.94□□□□□ -2.26
CLK1-206ENST00000461326 WFDC13Q8IUB5 93 aa0.94□□□□□ -2.26
CLK1-206ENST00000461326 UBL5Q9BZL1 73 aa0.94□□□□□ -2.26
CLK1-206ENST00000461326 MMP24-AS1A0A0U1RRL7 71 aa0.93□□□□□ -2.26
CLK1-206ENST00000461326 MT1HP80294 61 aa0.93□□□□□ -2.26
CLK1-206ENST00000461326 MIR22HGQ0VDD5 57 aa0.93□□□□□ -2.26
CLK1-206ENST00000461326 KRTAP19-2Q3LHN2 52 aa0.93□□□□□ -2.26
CLK1-206ENST00000461326 CASC2Q6XLA1 102 aa0.93□□□□□ -2.26
CLK1-206ENST00000461326 MRPL34Q9BQ48 92 aaKnown RBP0.93□□□□□ -2.26
CLK1-206ENST00000461326 LINC00846Q9NV44 126 aa0.93□□□□□ -2.26
CLK1-206ENST00000461326 FAT4Q6V0I7 4981 aa0.93□□□□□ -2.26
CLK1-206ENST00000461326 A0A1B0GV90 55 aa0.92□□□□□ -2.26
CLK1-206ENST00000461326 HCG22E2RYF7 251 aa0.92□□□□□ -2.26
CLK1-206ENST00000461326 SPINK7P58062 85 aa0.92□□□□□ -2.26
CLK1-206ENST00000461326 KRTAP5-10Q6L8G5 202 aa0.91□□□□□ -2.26
CLK1-206ENST00000461326 ACYP1P07311 99 aa0.9□□□□□ -2.27
CLK1-206ENST00000461326 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.27
CLK1-206ENST00000461326 A0A087WVE0 104 aa0.89□□□□□ -2.27
CLK1-206ENST00000461326 J3QR89 54 aa0.89□□□□□ -2.27
CLK1-206ENST00000461326 ATP5EP2Q5VTU8 51 aa0.89□□□□□ -2.27
CLK1-206ENST00000461326 TP53AIP1Q9HCN2 124 aa0.89□□□□□ -2.27
CLK1-206ENST00000461326 TRAV22A0A0B4J277 110 aa0.88□□□□□ -2.27
CLK1-206ENST00000461326 A6NN06 94 aa0.88□□□□□ -2.27
CLK1-206ENST00000461326 H0Y9P7 68 aa0.88□□□□□ -2.27
CLK1-206ENST00000461326 RPS28P62857 69 aaKnown RBP0.88□□□□□ -2.27
CLK1-206ENST00000461326 H1FX-AS1Q4G0G2 97 aa0.88□□□□□ -2.27
CLK1-206ENST00000461326 LINC00643Q86TS7 51 aa0.88□□□□□ -2.27
CLK1-206ENST00000461326 S4R3F8 94 aa0.88□□□□□ -2.27
CLK1-206ENST00000461326 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
CLK1-206ENST00000461326 FAM236AA0A1B0GUQ0 79 aa0.87□□□□□ -2.27
CLK1-206ENST00000461326 FAM236BA0A1B0GV22 79 aa0.87□□□□□ -2.27
CLK1-206ENST00000461326 LOC101927531A0A1B0GV80 90 aa0.87□□□□□ -2.27
CLK1-206ENST00000461326 UQCRQO14949 82 aa0.87□□□□□ -2.27
CLK1-206ENST00000461326 MT2AP02795 61 aa0.87□□□□□ -2.27
CLK1-206ENST00000461326 MT1FP04733 61 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms