RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 LINC00643Q86TS7 51 aa3.61□□□□□ -1.83
RTN4-212ENST00000461004 ATP5EP2Q5VTU8 51 aa3.59□□□□□ -1.83
RTN4-212ENST00000461004 C7orf65Q6ZTY9 151 aa3.58□□□□□ -1.84
RTN4-212ENST00000461004 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
RTN4-212ENST00000461004 J3QR89 54 aa3.56□□□□□ -1.84
RTN4-212ENST00000461004 C4orf26Q17RF5 130 aa3.56□□□□□ -1.84
RTN4-212ENST00000461004 TP53AIP1Q9HCN2 124 aa3.56□□□□□ -1.84
RTN4-212ENST00000461004 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
RTN4-212ENST00000461004 H1FX-AS1Q4G0G2 97 aa3.53□□□□□ -1.84
RTN4-212ENST00000461004 TRAV22A0A0B4J277 110 aa3.52□□□□□ -1.85
RTN4-212ENST00000461004 MT2AP02795 61 aa3.52□□□□□ -1.85
RTN4-212ENST00000461004 MT-ATP8P03928 68 aa3.52□□□□□ -1.85
RTN4-212ENST00000461004 CYP4F30PQ9H0H9 118 aa3.52□□□□□ -1.85
RTN4-212ENST00000461004 H0Y9P7 68 aa3.51□□□□□ -1.85
RTN4-212ENST00000461004 UQCRQO14949 82 aa3.51□□□□□ -1.85
RTN4-212ENST00000461004 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
RTN4-212ENST00000461004 K7ERU9 68 aa3.5□□□□□ -1.85
RTN4-212ENST00000461004 MT1FP04733 61 aa3.5□□□□□ -1.85
RTN4-212ENST00000461004 C1orf64Q8NEQ6 169 aa3.5□□□□□ -1.85
RTN4-212ENST00000461004 OCR1Q9BZK8 76 aa3.5□□□□□ -1.85
RTN4-212ENST00000461004 LOC101927531A0A1B0GV80 90 aa3.48□□□□□ -1.85
RTN4-212ENST00000461004 USH2AO75445 5202 aa3.47□□□□□ -1.85
RTN4-212ENST00000461004 KLKP1Q107X0 134 aa3.47□□□□□ -1.85
RTN4-212ENST00000461004 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
RTN4-212ENST00000461004 LINC00208Q96KT6 92 aa3.47□□□□□ -1.85
RTN4-212ENST00000461004 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
RTN4-212ENST00000461004 ATOX1O00244 68 aa3.45□□□□□ -1.86
RTN4-212ENST00000461004 SCGB1A1P11684 91 aa3.45□□□□□ -1.86
RTN4-212ENST00000461004 KRTAP10-10P60014 251 aa3.45□□□□□ -1.86
RTN4-212ENST00000461004 KRTAP10-5P60370 271 aa3.45□□□□□ -1.86
RTN4-212ENST00000461004 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
RTN4-212ENST00000461004 C5orf47Q569G3 176 aa3.44□□□□□ -1.86
RTN4-212ENST00000461004 IMUPQ9GZP8 106 aa3.44□□□□□ -1.86
RTN4-212ENST00000461004 FAM236AA0A1B0GUQ0 79 aa3.43□□□□□ -1.86
RTN4-212ENST00000461004 FAM236BA0A1B0GV22 79 aa3.43□□□□□ -1.86
RTN4-212ENST00000461004 LCA10Q71F78 164 aa3.43□□□□□ -1.86
RTN4-212ENST00000461004 MP68P56378 58 aa3.42□□□□□ -1.86
RTN4-212ENST00000461004 S4R3F8 94 aa3.42□□□□□ -1.86
RTN4-212ENST00000461004 SSPOA2VEC9 5147 aa3.42□□□□□ -1.86
RTN4-212ENST00000461004 CRCT1Q9UGL9 99 aa3.4□□□□□ -1.87
RTN4-212ENST00000461004 TRAV7A0A075B6U4 112 aa3.38□□□□□ -1.87
RTN4-212ENST00000461004 CSAG1Q6PB30 78 aa3.38□□□□□ -1.87
RTN4-212ENST00000461004 H3BPC8 53 aa3.37□□□□□ -1.87
RTN4-212ENST00000461004 SMIM20Q8N5G0 67 aa3.34□□□□□ -1.87
RTN4-212ENST00000461004 SNURFQ9Y675 71 aa3.34□□□□□ -1.87
RTN4-212ENST00000461004 A8MUN3 132 aa3.33□□□□□ -1.88
RTN4-212ENST00000461004 DMAC1Q96GE9 116 aa3.32□□□□□ -1.88
RTN4-212ENST00000461004 NDUFC1O43677 76 aa3.31□□□□□ -1.88
RTN4-212ENST00000461004 C20orf197Q8N268 126 aa3.31□□□□□ -1.88
RTN4-212ENST00000461004 SERP2Q8N6R1 65 aa3.31□□□□□ -1.88
RTN4-212ENST00000461004 FCGBPQ9Y6R7 5405 aaPredicted RBP3.3□□□□□ -1.88
RTN4-212ENST00000461004 ADM2Q7Z4H4 148 aa3.27□□□□□ -1.89
RTN4-212ENST00000461004 CYSTM1Q9H1C7 97 aa3.26□□□□□ -1.89
RTN4-212ENST00000461004 MT1BP07438 61 aa3.25□□□□□ -1.89
RTN4-212ENST00000461004 COX7CP15954 63 aa3.25□□□□□ -1.89
RTN4-212ENST00000461004 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
RTN4-212ENST00000461004 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
RTN4-212ENST00000461004 H0YAA0 97 aa3.24□□□□□ -1.89
RTN4-212ENST00000461004 ACYP2P14621 99 aa3.24□□□□□ -1.89
RTN4-212ENST00000461004 P0C880 135 aa3.23□□□□□ -1.89
RTN4-212ENST00000461004 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
RTN4-212ENST00000461004 KRTAP19-6Q3LI70 58 aa3.23□□□□□ -1.89
RTN4-212ENST00000461004 SPANXA2-OT1Q8N9U9 137 aa3.22□□□□□ -1.89
RTN4-212ENST00000461004 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.9
RTN4-212ENST00000461004 MACF1Q9UPN3 7388 aaKnown RBP3.2□□□□□ -1.9
RTN4-212ENST00000461004 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
RTN4-212ENST00000461004 CHKB-CPT1BH3BT56 60 aa3.19□□□□□ -1.9
RTN4-212ENST00000461004 H7BZZ5 65 aa3.19□□□□□ -1.9
RTN4-212ENST00000461004 Q5VV11 94 aa3.19□□□□□ -1.9
RTN4-212ENST00000461004 ANAPC13Q9BS18 74 aa3.19□□□□□ -1.9
RTN4-212ENST00000461004 CRIPTQ9P021 101 aa3.19□□□□□ -1.9
RTN4-212ENST00000461004 CCDC179H3BU77 68 aa3.18□□□□□ -1.9
RTN4-212ENST00000461004 COA5Q86WW8 74 aa3.16□□□□□ -1.9
RTN4-212ENST00000461004 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
RTN4-212ENST00000461004 SPTSSBQ8NFR3 76 aa3.14□□□□□ -1.91
RTN4-212ENST00000461004 M0QZ58 72 aa3.13□□□□□ -1.91
RTN4-212ENST00000461004 R4GN34 69 aa3.13□□□□□ -1.91
RTN4-212ENST00000461004 A6NN06 94 aa3.12□□□□□ -1.91
RTN4-212ENST00000461004 A8MU10 97 aa3.1□□□□□ -1.91
RTN4-212ENST00000461004 LINC01554Q52M75 96 aa3.1□□□□□ -1.91
RTN4-212ENST00000461004 KRTAP13-4Q3LI77 160 aa3.09□□□□□ -1.91
RTN4-212ENST00000461004 MT1XP80297 61 aa3.06□□□□□ -1.92
RTN4-212ENST00000461004 PLAC4Q8WY50 150 aa3.06□□□□□ -1.92
RTN4-212ENST00000461004 KMT2DO14686 5537 aa3.03□□□□□ -1.93
RTN4-212ENST00000461004 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
RTN4-212ENST00000461004 SPATA8Q6RVD6 105 aa3.01□□□□□ -1.93
RTN4-212ENST00000461004 SERP1Q9Y6X1 66 aa3.01□□□□□ -1.93
RTN4-212ENST00000461004 NEBP20929 6669 aa3□□□□□ -1.93
RTN4-212ENST00000461004 SEC61GP60059 68 aa3□□□□□ -1.93
RTN4-212ENST00000461004 A0A1B0GU33 70 aa2.99□□□□□ -1.93
RTN4-212ENST00000461004 ATP5EP56381 51 aaPredicted RBP2.99□□□□□ -1.93
RTN4-212ENST00000461004 TMEM258P61165 79 aa2.99□□□□□ -1.93
RTN4-212ENST00000461004 KRTAP6-3Q3LI67 103 aa2.99□□□□□ -1.93
RTN4-212ENST00000461004 A0A0D9SG42 100 aa2.98□□□□□ -1.93
RTN4-212ENST00000461004 PRO2289Q9P1D8 64 aa2.98□□□□□ -1.93
RTN4-212ENST00000461004 A0A1B0GU69 56 aa2.97□□□□□ -1.93
RTN4-212ENST00000461004 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
RTN4-212ENST00000461004 LINC01558Q9Y6Z2 57 aa2.93□□□□□ -1.94
RTN4-212ENST00000461004 KRTAP12-1P59990 96 aa2.92□□□□□ -1.94
RTN4-212ENST00000461004 SPINT4Q6UDR6 99 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms