RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 SYNE2Q8WXH0 6885 aaKnown RBP10.69□□□□□ -0.7
HOXB3-202ENST00000460160 SPRR2GQ9BYE4 73 aa10.67□□□□□ -0.7
HOXB3-202ENST00000460160 KLKP1Q107X0 134 aa10.63□□□□□ -0.71
HOXB3-202ENST00000460160 MT1BP07438 61 aa10.62□□□□□ -0.71
HOXB3-202ENST00000460160 KRTAP19-8Q3LI54 63 aa10.6□□□□□ -0.71
HOXB3-202ENST00000460160 Q5VV11 94 aa10.58□□□□□ -0.72
HOXB3-202ENST00000460160 MT-ATP8P03928 68 aa10.55□□□□□ -0.72
HOXB3-202ENST00000460160 OCR1Q9BZK8 76 aa10.55□□□□□ -0.72
HOXB3-202ENST00000460160 LINC00208Q96KT6 92 aa10.54□□□□□ -0.72
HOXB3-202ENST00000460160 NDUFC1O43677 76 aa10.5□□□□□ -0.73
HOXB3-202ENST00000460160 A8MUN3 132 aa10.49□□□□□ -0.73
HOXB3-202ENST00000460160 IMUPQ9GZP8 106 aa10.48□□□□□ -0.73
HOXB3-202ENST00000460160 MP68P56378 58 aa10.48□□□□□ -0.73
HOXB3-202ENST00000460160 CRIPTQ9P021 101 aa10.47□□□□□ -0.73
HOXB3-202ENST00000460160 A6NN06 94 aa10.46□□□□□ -0.74
HOXB3-202ENST00000460160 H0YAA0 97 aa10.43□□□□□ -0.74
HOXB3-202ENST00000460160 KRTAP6-3Q3LI67 103 aa10.41□□□□□ -0.74
HOXB3-202ENST00000460160 KRTAP10-5P60370 271 aa10.37□□□□□ -0.75
HOXB3-202ENST00000460160 SCGB1A1P11684 91 aa10.34□□□□□ -0.75
HOXB3-202ENST00000460160 H3BPC8 53 aa10.33□□□□□ -0.76
HOXB3-202ENST00000460160 ADM2Q7Z4H4 148 aa10.32□□□□□ -0.76
HOXB3-202ENST00000460160 DMAC1Q96GE9 116 aa10.23□□□□□ -0.77
HOXB3-202ENST00000460160 TRAV7A0A075B6U4 112 aa10.17□□□□□ -0.78
HOXB3-202ENST00000460160 SMIM20Q8N5G0 67 aa10.15□□□□□ -0.78
HOXB3-202ENST00000460160 P0C880 135 aa10.11□□□□□ -0.79
HOXB3-202ENST00000460160 MUC12Q9UKN1 5478 aa10.08□□□□□ -0.8
HOXB3-202ENST00000460160 C20orf197Q8N268 126 aa10.04□□□□□ -0.8
HOXB3-202ENST00000460160 R4GN34 69 aa10.04□□□□□ -0.8
HOXB3-202ENST00000460160 NEBP20929 6669 aa10.04□□□□□ -0.8
HOXB3-202ENST00000460160 KRTAP3-2Q9BYR7 98 aa10.03□□□□□ -0.8
HOXB3-202ENST00000460160 SERP2Q8N6R1 65 aa10.01□□□□□ -0.81
HOXB3-202ENST00000460160 M0QZ58 72 aa9.97□□□□□ -0.81
HOXB3-202ENST00000460160 MT1XP80297 61 aa9.97□□□□□ -0.81
HOXB3-202ENST00000460160 PLAC4Q8WY50 150 aa9.97□□□□□ -0.81
HOXB3-202ENST00000460160 KRTAP5-9P26371 169 aa9.96□□□□□ -0.82
HOXB3-202ENST00000460160 ACYP2P14621 99 aa9.95□□□□□ -0.82
HOXB3-202ENST00000460160 SNURFQ9Y675 71 aa9.95□□□□□ -0.82
HOXB3-202ENST00000460160 PRO2289Q9P1D8 64 aa9.94□□□□□ -0.82
HOXB3-202ENST00000460160 KMT2DO14686 5537 aa9.94□□□□□ -0.82
HOXB3-202ENST00000460160 MDN1Q9NU22 5596 aa9.85□□□□□ -0.83
HOXB3-202ENST00000460160 COX7CP15954 63 aa9.84□□□□□ -0.83
HOXB3-202ENST00000460160 LINC01554Q52M75 96 aa9.82□□□□□ -0.84
HOXB3-202ENST00000460160 SPTSSBQ8NFR3 76 aa9.81□□□□□ -0.84
HOXB3-202ENST00000460160 CHKB-CPT1BH3BT56 60 aa9.75□□□□□ -0.85
HOXB3-202ENST00000460160 ANAPC13Q9BS18 74 aa9.72□□□□□ -0.85
HOXB3-202ENST00000460160 KRTAP12-2P59991 146 aa9.71□□□□□ -0.86
HOXB3-202ENST00000460160 SPANXA2-OT1Q8N9U9 137 aa9.71□□□□□ -0.86
HOXB3-202ENST00000460160 CYSTM1Q9H1C7 97 aa9.7□□□□□ -0.86
HOXB3-202ENST00000460160 SPRR2FQ96RM1 72 aa9.66□□□□□ -0.86
HOXB3-202ENST00000460160 KRTAP20-1Q3LI63 56 aa9.62□□□□□ -0.87
HOXB3-202ENST00000460160 H7BZZ5 65 aa9.61□□□□□ -0.87
HOXB3-202ENST00000460160 KRTAP8-1Q8IUC2 63 aa9.61□□□□□ -0.87
HOXB3-202ENST00000460160 CCDC179H3BU77 68 aa9.58□□□□□ -0.88
HOXB3-202ENST00000460160 KRTAP4-8A0A0G2JLE6 195 aa9.53□□□□□ -0.88
HOXB3-202ENST00000460160 KRTAP4-8Q9BYQ9 185 aa9.53□□□□□ -0.88
HOXB3-202ENST00000460160 KRTAP10-7P60409 375 aaPredicted RBP9.51□□□□□ -0.89
HOXB3-202ENST00000460160 SPRR2EP22531 72 aa9.51□□□□□ -0.89
HOXB3-202ENST00000460160 SPRR2BP35325 72 aa9.51□□□□□ -0.89
HOXB3-202ENST00000460160 SPRR2AP35326 72 aa9.51□□□□□ -0.89
HOXB3-202ENST00000460160 KRTAP10-12P60413 245 aa9.46□□□□□ -0.9
HOXB3-202ENST00000460160 KRTAP13-4Q3LI77 160 aa9.46□□□□□ -0.9
HOXB3-202ENST00000460160 COA5Q86WW8 74 aa9.42□□□□□ -0.9
HOXB3-202ENST00000460160 LCE1AQ5T7P2 110 aa9.41□□□□□ -0.9
HOXB3-202ENST00000460160 KRTAP2-3P0C7H8 128 aa9.37□□□□□ -0.91
HOXB3-202ENST00000460160 KRTAP2-4Q9BYR9 128 aa9.37□□□□□ -0.91
HOXB3-202ENST00000460160 SEC61GP60059 68 aa9.22□□□□□ -0.93
HOXB3-202ENST00000460160 CAMK2N1Q7Z7J9 78 aa9.22□□□□□ -0.93
HOXB3-202ENST00000460160 SERP1Q9Y6X1 66 aa9.21□□□□□ -0.94
HOXB3-202ENST00000460160 ATP5EP56381 51 aaPredicted RBP9.19□□□□□ -0.94
HOXB3-202ENST00000460160 SPRR2DP22532 72 aa9.18□□□□□ -0.94
HOXB3-202ENST00000460160 TMEM258P61165 79 aa9.16□□□□□ -0.94
HOXB3-202ENST00000460160 A0A0D9SG42 100 aa9.14□□□□□ -0.95
HOXB3-202ENST00000460160 SPATA8Q6RVD6 105 aa9.13□□□□□ -0.95
HOXB3-202ENST00000460160 A0A1B0GU33 70 aa9.1□□□□□ -0.95
HOXB3-202ENST00000460160 KRTAP2-2Q9BYT5 123 aa9.08□□□□□ -0.96
HOXB3-202ENST00000460160 KRTAP2-1Q9BYU5 128 aa9.08□□□□□ -0.96
HOXB3-202ENST00000460160 SPINT4Q6UDR6 99 aa8.99□□□□□ -0.97
HOXB3-202ENST00000460160 KRTAP12-1P59990 96 aa8.97□□□□□ -0.97
HOXB3-202ENST00000460160 PCP4P48539 62 aa8.96□□□□□ -0.97
HOXB3-202ENST00000460160 LCE3BQ5TA77 95 aa8.94□□□□□ -0.98
HOXB3-202ENST00000460160 A0A1B0GU69 56 aa8.92□□□□□ -0.98
HOXB3-202ENST00000460160 KRTAP19-7Q3SYF9 63 aa8.91□□□□□ -0.98
HOXB3-202ENST00000460160 LINC01558Q9Y6Z2 57 aa8.85□□□□□ -0.99
HOXB3-202ENST00000460160 MT1EP04732 61 aa8.83□□□□□ -1
HOXB3-202ENST00000460160 SMIM26A0A096LP01 95 aa8.82□□□□□ -1
HOXB3-202ENST00000460160 A8MU10 97 aa8.8□□□□□ -1
HOXB3-202ENST00000460160 LCE5AQ5TCM9 118 aa8.77□□□□□ -1.01
HOXB3-202ENST00000460160 KRTAP19-3Q7Z4W3 81 aa8.74□□□□□ -1.01
HOXB3-202ENST00000460160 PRR15LQ9BU68 103 aa8.71□□□□□ -1.01
HOXB3-202ENST00000460160 KRTAP19-5Q3LI72 72 aa8.68□□□□□ -1.02
HOXB3-202ENST00000460160 DSTQ03001 7570 aaKnown RBP8.64□□□□□ -1.03
HOXB3-202ENST00000460160 Q1T7F1 81 aa8.59□□□□□ -1.03
HOXB3-202ENST00000460160 C10orf95Q9H7T3 257 aa8.59□□□□□ -1.03
HOXB3-202ENST00000460160 RPS28P62857 69 aaKnown RBP8.58□□□□□ -1.04
HOXB3-202ENST00000460160 V9GYY9 64 aa8.54□□□□□ -1.04
HOXB3-202ENST00000460160 MT1GP13640 62 aa8.53□□□□□ -1.04
HOXB3-202ENST00000460160 TNP1P09430 55 aa8.51□□□□□ -1.05
HOXB3-202ENST00000460160 LCE3AQ5TA76 89 aa8.49□□□□□ -1.05
HOXB3-202ENST00000460160 UQCR11O14957 56 aa8.49□□□□□ -1.05
HOXB3-202ENST00000460160 PSPHP1O15172 72 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms