RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 MUC17Q685J3 4493 aa4.56□□□□□ -1.68
RIF1-208ENST00000457745 H7BZZ5 65 aa4.56□□□□□ -1.68
RIF1-208ENST00000457745 IGKV2D-30A0A075B6S6 120 aa4.55□□□□□ -1.68
RIF1-208ENST00000457745 SVIPQ8NHG7 77 aa4.55□□□□□ -1.68
RIF1-208ENST00000457745 CYP4F30PQ9H0H9 118 aa4.55□□□□□ -1.68
RIF1-208ENST00000457745 MP68P56378 58 aa4.53□□□□□ -1.68
RIF1-208ENST00000457745 SPINK7P58062 85 aa4.51□□□□□ -1.69
RIF1-208ENST00000457745 LOC101927531A0A1B0GV80 90 aa4.5□□□□□ -1.69
RIF1-208ENST00000457745 H3BPC8 53 aa4.5□□□□□ -1.69
RIF1-208ENST00000457745 HRES1P13985 223 aa4.5□□□□□ -1.69
RIF1-208ENST00000457745 ATP11AUNQ6ZP68 121 aa4.5□□□□□ -1.69
RIF1-208ENST00000457745 C7orf65Q6ZTY9 151 aa4.47□□□□□ -1.69
RIF1-208ENST00000457745 UBR4Q5T4S7 5183 aa4.47□□□□□ -1.69
RIF1-208ENST00000457745 C4orf26Q17RF5 130 aa4.46□□□□□ -1.7
RIF1-208ENST00000457745 KRTAP19-2Q3LHN2 52 aa4.46□□□□□ -1.7
RIF1-208ENST00000457745 RNF213Q63HN8 5207 aa4.45□□□□□ -1.7
RIF1-208ENST00000457745 MPLKIPQ8TAP9 179 aa4.44□□□□□ -1.7
RIF1-208ENST00000457745 SEC61BP60468 96 aaKnown RBP4.43□□□□□ -1.7
RIF1-208ENST00000457745 FAM236DA0A1B0GTK5 79 aa4.42□□□□□ -1.7
RIF1-208ENST00000457745 FAM236CP0DP71 79 aa4.42□□□□□ -1.7
RIF1-208ENST00000457745 TMEM258P61165 79 aa4.41□□□□□ -1.7
RIF1-208ENST00000457745 NDUFC1O43677 76 aa4.4□□□□□ -1.71
RIF1-208ENST00000457745 SPANXA2-OT1Q8N9U9 137 aa4.39□□□□□ -1.71
RIF1-208ENST00000457745 COX6B2Q6YFQ2 88 aa4.38□□□□□ -1.71
RIF1-208ENST00000457745 DMAC1Q96GE9 116 aa4.38□□□□□ -1.71
RIF1-208ENST00000457745 MUC2Q02817 5179 aa4.35□□□□□ -1.71
RIF1-208ENST00000457745 COA5Q86WW8 74 aa4.33□□□□□ -1.72
RIF1-208ENST00000457745 ATP5EP56381 51 aaPredicted RBP4.3□□□□□ -1.72
RIF1-208ENST00000457745 SERP1Q9Y6X1 66 aa4.29□□□□□ -1.72
RIF1-208ENST00000457745 H1FX-AS1Q4G0G2 97 aa4.27□□□□□ -1.73
RIF1-208ENST00000457745 LCA10Q71F78 164 aa4.27□□□□□ -1.73
RIF1-208ENST00000457745 ACYP2P14621 99 aa4.26□□□□□ -1.73
RIF1-208ENST00000457745 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
RIF1-208ENST00000457745 A8MUN3 132 aa4.25□□□□□ -1.73
RIF1-208ENST00000457745 RBM12B-AS1Q9P1G2 102 aa4.25□□□□□ -1.73
RIF1-208ENST00000457745 FLGP20930 4061 aaPredicted RBP4.24□□□□□ -1.73
RIF1-208ENST00000457745 S4R3F8 94 aa4.23□□□□□ -1.73
RIF1-208ENST00000457745 MT1HP80294 61 aa4.22□□□□□ -1.73
RIF1-208ENST00000457745 RPS28P62857 69 aaKnown RBP4.21□□□□□ -1.74
RIF1-208ENST00000457745 CHKB-CPT1BH3BT56 60 aa4.18□□□□□ -1.74
RIF1-208ENST00000457745 SMIM26A0A096LP01 95 aa4.15□□□□□ -1.75
RIF1-208ENST00000457745 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
RIF1-208ENST00000457745 LINC01558Q9Y6Z2 57 aa4.12□□□□□ -1.75
RIF1-208ENST00000457745 P0C880 135 aa4.11□□□□□ -1.75
RIF1-208ENST00000457745 Q1T7F1 81 aa4.1□□□□□ -1.75
RIF1-208ENST00000457745 PSPHP1O15172 72 aa4.09□□□□□ -1.75
RIF1-208ENST00000457745 CSAG1Q6PB30 78 aa4.09□□□□□ -1.75
RIF1-208ENST00000457745 Q5VV11 94 aa4.08□□□□□ -1.76
RIF1-208ENST00000457745 ADM2Q7Z4H4 148 aa4.07□□□□□ -1.76
RIF1-208ENST00000457745 PRR15LQ9BU68 103 aa4.07□□□□□ -1.76
RIF1-208ENST00000457745 MT2AP02795 61 aa4.06□□□□□ -1.76
RIF1-208ENST00000457745 MT1FP04733 61 aa4.06□□□□□ -1.76
RIF1-208ENST00000457745 KRTAP13-4Q3LI77 160 aa4.05□□□□□ -1.76
RIF1-208ENST00000457745 SPTSSBQ8NFR3 76 aa4.04□□□□□ -1.76
RIF1-208ENST00000457745 M0R2T5 61 aa4.03□□□□□ -1.76
RIF1-208ENST00000457745 A8MU10 97 aa4.02□□□□□ -1.77
RIF1-208ENST00000457745 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
RIF1-208ENST00000457745 A0A1B0GU69 56 aa4.01□□□□□ -1.77
RIF1-208ENST00000457745 H0YAA0 97 aa4.01□□□□□ -1.77
RIF1-208ENST00000457745 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
RIF1-208ENST00000457745 SPATA8Q6RVD6 105 aa3.98□□□□□ -1.77
RIF1-208ENST00000457745 V9GYY9 64 aa3.97□□□□□ -1.77
RIF1-208ENST00000457745 A0A1B0GU33 70 aa3.94□□□□□ -1.78
RIF1-208ENST00000457745 KRTAP10-10P60014 251 aa3.92□□□□□ -1.78
RIF1-208ENST00000457745 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
RIF1-208ENST00000457745 SEC61GP60059 68 aa3.91□□□□□ -1.78
RIF1-208ENST00000457745 M0QZ58 72 aa3.9□□□□□ -1.79
RIF1-208ENST00000457745 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
RIF1-208ENST00000457745 A6NED7 52 aa3.88□□□□□ -1.79
RIF1-208ENST00000457745 A0A0D9SG42 100 aa3.87□□□□□ -1.79
RIF1-208ENST00000457745 SPRR2GQ9BYE4 73 aa3.86□□□□□ -1.79
RIF1-208ENST00000457745 UQCR11O14957 56 aa3.85□□□□□ -1.79
RIF1-208ENST00000457745 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
RIF1-208ENST00000457745 LINC01554Q52M75 96 aa3.84□□□□□ -1.79
RIF1-208ENST00000457745 R4GN34 69 aa3.84□□□□□ -1.79
RIF1-208ENST00000457745 MT1BP07438 61 aa3.83□□□□□ -1.8
RIF1-208ENST00000457745 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
RIF1-208ENST00000457745 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
RIF1-208ENST00000457745 KRTAP12-1P59990 96 aa3.82□□□□□ -1.8
RIF1-208ENST00000457745 CDC42SE1Q9NRR8 79 aa3.82□□□□□ -1.8
RIF1-208ENST00000457745 KRTAP19-8Q3LI54 63 aa3.81□□□□□ -1.8
RIF1-208ENST00000457745 BRK1Q8WUW1 75 aa3.81□□□□□ -1.8
RIF1-208ENST00000457745 CRIPTQ9P021 101 aa3.79□□□□□ -1.8
RIF1-208ENST00000457745 USH2AO75445 5202 aa3.77□□□□□ -1.81
RIF1-208ENST00000457745 SPINT4Q6UDR6 99 aa3.74□□□□□ -1.81
RIF1-208ENST00000457745 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
RIF1-208ENST00000457745 A6NN06 94 aa3.69□□□□□ -1.82
RIF1-208ENST00000457745 SSPOA2VEC9 5147 aa3.67□□□□□ -1.82
RIF1-208ENST00000457745 MT1XP80297 61 aa3.67□□□□□ -1.82
RIF1-208ENST00000457745 KRTAP10-5P60370 271 aa3.66□□□□□ -1.82
RIF1-208ENST00000457745 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
RIF1-208ENST00000457745 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
RIF1-208ENST00000457745 MT3P25713 68 aa3.65□□□□□ -1.83
RIF1-208ENST00000457745 FSIP2Q5CZC0 6907 aa3.61□□□□□ -1.83
RIF1-208ENST00000457745 PLAC4Q8WY50 150 aa3.61□□□□□ -1.83
RIF1-208ENST00000457745 CAMK2N1Q7Z7J9 78 aa3.58□□□□□ -1.84
RIF1-208ENST00000457745 PMAIP1Q13794 54 aa3.56□□□□□ -1.84
RIF1-208ENST00000457745 KRTAP19-6Q3LI70 58 aa3.56□□□□□ -1.84
RIF1-208ENST00000457745 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
RIF1-208ENST00000457745 K7ERS5 55 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms