RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 FAT3Q8TDW7 4589 aa7.42□□□□□ -1.22
TOP3B-213ENST00000457179 KRTAP10-4P60372 401 aaPredicted RBP7.4□□□□□ -1.22
TOP3B-213ENST00000457179 HSPG2P98160 4391 aa7.37□□□□□ -1.23
TOP3B-213ENST00000457179 KRTAP17-1Q9BYP8 105 aa7.36□□□□□ -1.23
TOP3B-213ENST00000457179 H1FX-AS1Q4G0G2 97 aa7.35□□□□□ -1.23
TOP3B-213ENST00000457179 SPINT4Q6UDR6 99 aa7.34□□□□□ -1.23
TOP3B-213ENST00000457179 K7ERS5 55 aa7.34□□□□□ -1.23
TOP3B-213ENST00000457179 RYR1P21817 5038 aa7.33□□□□□ -1.24
TOP3B-213ENST00000457179 PKHD1L1Q86WI1 4243 aa7.3□□□□□ -1.24
TOP3B-213ENST00000457179 NDUFAF8A1L188 74 aa7.24□□□□□ -1.25
TOP3B-213ENST00000457179 COX6B2Q6YFQ2 88 aa7.22□□□□□ -1.25
TOP3B-213ENST00000457179 A0A0D9SG42 100 aa7.2□□□□□ -1.26
TOP3B-213ENST00000457179 KRTAP3-1Q9BYR8 98 aa7.19□□□□□ -1.26
TOP3B-213ENST00000457179 C10orf95Q9H7T3 257 aa7.19□□□□□ -1.26
TOP3B-213ENST00000457179 KRTAP4-5Q9BYR2 181 aa7.19□□□□□ -1.26
TOP3B-213ENST00000457179 TPRXLQ17RH7 258 aa7.17□□□□□ -1.26
TOP3B-213ENST00000457179 RPS29P62273 56 aaKnown RBP7.16□□□□□ -1.26
TOP3B-213ENST00000457179 BIRC6Q9NR09 4857 aa7.15□□□□□ -1.26
TOP3B-213ENST00000457179 KRTAP10-8P60410 259 aa7.15□□□□□ -1.27
TOP3B-213ENST00000457179 TNXBP22105 4242 aa7.14□□□□□ -1.27
TOP3B-213ENST00000457179 ABCA13Q86UQ4 5058 aa7.14□□□□□ -1.27
TOP3B-213ENST00000457179 C20orf166-AS1Q96NR2 134 aa7.12□□□□□ -1.27
TOP3B-213ENST00000457179 RPL37P61927 97 aaKnown RBP7.1□□□□□ -1.27
TOP3B-213ENST00000457179 LRP2P98164 4655 aa7.1□□□□□ -1.27
TOP3B-213ENST00000457179 LPAP08519 4548 aa7.08□□□□□ -1.28
TOP3B-213ENST00000457179 MT1HL1P0DM35 61 aa7.05□□□□□ -1.28
TOP3B-213ENST00000457179 KRTAP13-4Q3LI77 160 aa7.04□□□□□ -1.28
TOP3B-213ENST00000457179 KRTAP15-1Q3LI76 137 aa7.03□□□□□ -1.28
TOP3B-213ENST00000457179 XP32Q5T750 250 aa7.01□□□□□ -1.29
TOP3B-213ENST00000457179 HERC2O95714 4834 aa7□□□□□ -1.29
TOP3B-213ENST00000457179 J3QL48 77 aa6.99□□□□□ -1.29
TOP3B-213ENST00000457179 MUC2Q02817 5179 aa6.95□□□□□ -1.3
TOP3B-213ENST00000457179 KRTAP10-6P60371 365 aaPredicted RBP6.95□□□□□ -1.3
TOP3B-213ENST00000457179 PCLOQ9Y6V0 5065 aa6.94□□□□□ -1.3
TOP3B-213ENST00000457179 A0A0A0MQY5 61 aa6.92□□□□□ -1.3
TOP3B-213ENST00000457179 S4R3F8 94 aa6.88□□□□□ -1.31
TOP3B-213ENST00000457179 KRTAP12-2P59991 146 aa6.86□□□□□ -1.31
TOP3B-213ENST00000457179 HERC1Q15751 4861 aa6.85□□□□□ -1.31
TOP3B-213ENST00000457179 KRTAP3-2Q9BYR7 98 aa6.83□□□□□ -1.32
TOP3B-213ENST00000457179 KRTAP3-3Q9BYR6 98 aa6.82□□□□□ -1.32
TOP3B-213ENST00000457179 KRTAP12-1P59990 96 aa6.71□□□□□ -1.33
TOP3B-213ENST00000457179 LUZP6Q538Z0 58 aa6.71□□□□□ -1.33
TOP3B-213ENST00000457179 RNF213Q63HN8 5207 aa6.66□□□□□ -1.34
TOP3B-213ENST00000457179 SEC61BP60468 96 aaKnown RBP6.59□□□□□ -1.35
TOP3B-213ENST00000457179 FAT4Q6V0I7 4981 aa6.59□□□□□ -1.36
TOP3B-213ENST00000457179 KRTAP4-1Q9BYQ7 146 aa6.58□□□□□ -1.36
TOP3B-213ENST00000457179 PLAC4Q8WY50 150 aa6.55□□□□□ -1.36
TOP3B-213ENST00000457179 UBR4Q5T4S7 5183 aa6.52□□□□□ -1.36
TOP3B-213ENST00000457179 M0QZ58 72 aa6.46□□□□□ -1.38
TOP3B-213ENST00000457179 HMCN2Q8NDA2 5059 aa6.42□□□□□ -1.38
TOP3B-213ENST00000457179 MUC17Q685J3 4493 aa6.41□□□□□ -1.38
TOP3B-213ENST00000457179 R4GN34 69 aa6.36□□□□□ -1.39
TOP3B-213ENST00000457179 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
TOP3B-213ENST00000457179 M0R2T5 61 aa6.28□□□□□ -1.4
TOP3B-213ENST00000457179 KRTAP19-2Q3LHN2 52 aa6.18□□□□□ -1.42
TOP3B-213ENST00000457179 CAMK2N1Q7Z7J9 78 aa6.15□□□□□ -1.43
TOP3B-213ENST00000457179 FLGP20930 4061 aaPredicted RBP6.14□□□□□ -1.43
TOP3B-213ENST00000457179 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
TOP3B-213ENST00000457179 LCE2CQ5TA81 110 aa6.02□□□□□ -1.45
TOP3B-213ENST00000457179 KRTAP10-10P60014 251 aa5.95□□□□□ -1.46
TOP3B-213ENST00000457179 MT1HP80294 61 aa5.95□□□□□ -1.46
TOP3B-213ENST00000457179 USH2AO75445 5202 aa5.87□□□□□ -1.47
TOP3B-213ENST00000457179 TNP1P09430 55 aa5.87□□□□□ -1.47
TOP3B-213ENST00000457179 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
TOP3B-213ENST00000457179 SPRR5A0A1B0GTR4 108 aa5.83□□□□□ -1.48
TOP3B-213ENST00000457179 MT1FP04733 61 aa5.81□□□□□ -1.48
TOP3B-213ENST00000457179 MT2AP02795 61 aa5.78□□□□□ -1.48
TOP3B-213ENST00000457179 PRO2289Q9P1D8 64 aa5.78□□□□□ -1.48
TOP3B-213ENST00000457179 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
TOP3B-213ENST00000457179 KRTAP9-8Q9BYQ0 159 aa5.73□□□□□ -1.49
TOP3B-213ENST00000457179 SPRR2GQ9BYE4 73 aa5.64□□□□□ -1.51
TOP3B-213ENST00000457179 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
TOP3B-213ENST00000457179 INE1O15225 51 aa5.56□□□□□ -1.52
TOP3B-213ENST00000457179 KMT2DO14686 5537 aa5.55□□□□□ -1.52
TOP3B-213ENST00000457179 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
TOP3B-213ENST00000457179 LCE2AQ5TA79 106 aaPredicted RBP5.51□□□□□ -1.53
TOP3B-213ENST00000457179 KRTAP9-3Q9BYQ3 159 aa5.47□□□□□ -1.53
TOP3B-213ENST00000457179 MT1BP07438 61 aa5.47□□□□□ -1.53
TOP3B-213ENST00000457179 LCE2BO14633 110 aa5.4□□□□□ -1.54
TOP3B-213ENST00000457179 KRTAP19-8Q3LI54 63 aa5.38□□□□□ -1.55
TOP3B-213ENST00000457179 MT1XP80297 61 aa5.37□□□□□ -1.55
TOP3B-213ENST00000457179 KRTAP10-5P60370 271 aa5.37□□□□□ -1.55
TOP3B-213ENST00000457179 KRTAP10-7P60409 375 aaPredicted RBP5.32□□□□□ -1.56
TOP3B-213ENST00000457179 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
TOP3B-213ENST00000457179 KRTAP8-1Q8IUC2 63 aa5.25□□□□□ -1.57
TOP3B-213ENST00000457179 SSPOA2VEC9 5147 aa5.22□□□□□ -1.57
TOP3B-213ENST00000457179 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
TOP3B-213ENST00000457179 KRTAP9-2Q9BYQ4 174 aa5.2□□□□□ -1.58
TOP3B-213ENST00000457179 KRTAP4-8A0A0G2JLE6 195 aa5.18□□□□□ -1.58
TOP3B-213ENST00000457179 KRTAP4-8Q9BYQ9 185 aa5.18□□□□□ -1.58
TOP3B-213ENST00000457179 LCE2DQ5TA82 110 aaPredicted RBP5.04□□□□□ -1.6
TOP3B-213ENST00000457179 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
TOP3B-213ENST00000457179 DSTQ03001 7570 aaKnown RBP5.01□□□□□ -1.61
TOP3B-213ENST00000457179 MUC12Q9UKN1 5478 aa4.99□□□□□ -1.61
TOP3B-213ENST00000457179 FCGBPQ9Y6R7 5405 aaPredicted RBP4.97□□□□□ -1.61
TOP3B-213ENST00000457179 CRCT1Q9UGL9 99 aa4.92□□□□□ -1.62
TOP3B-213ENST00000457179 KRTAP9-6A0A140TA67 174 aa4.91□□□□□ -1.62
TOP3B-213ENST00000457179 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.63
TOP3B-213ENST00000457179 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
TOP3B-213ENST00000457179 MACF1Q9UPN3 7388 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms