RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 CSAG1Q6PB30 78 aa4.88□□□□□ -1.63
USP1-204ENST00000452143 KRTAP10-5P60370 271 aa4.87□□□□□ -1.63
USP1-204ENST00000452143 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
USP1-204ENST00000452143 KRTAP20-1Q3LI63 56 aa4.86□□□□□ -1.63
USP1-204ENST00000452143 TSTD3H0UI37 97 aa4.85□□□□□ -1.63
USP1-204ENST00000452143 KRTAP5-9P26371 169 aa4.85□□□□□ -1.63
USP1-204ENST00000452143 LCA10Q71F78 164 aa4.85□□□□□ -1.63
USP1-204ENST00000452143 KLKP1Q107X0 134 aa4.83□□□□□ -1.64
USP1-204ENST00000452143 C1orf64Q8NEQ6 169 aa4.83□□□□□ -1.64
USP1-204ENST00000452143 A0A1W2PPM0 123 aa4.82□□□□□ -1.64
USP1-204ENST00000452143 SMIM6P0DI80 62 aa4.82□□□□□ -1.64
USP1-204ENST00000452143 BATFQ16520 125 aa4.82□□□□□ -1.64
USP1-204ENST00000452143 UBL5Q9BZL1 73 aa4.79□□□□□ -1.64
USP1-204ENST00000452143 TP53AIP1Q9HCN2 124 aa4.78□□□□□ -1.64
USP1-204ENST00000452143 CRIPTQ9P021 101 aa4.78□□□□□ -1.64
USP1-204ENST00000452143 TAX1BP3O14907 124 aa4.77□□□□□ -1.65
USP1-204ENST00000452143 IMUPQ9GZP8 106 aa4.76□□□□□ -1.65
USP1-204ENST00000452143 SPCS1Q9Y6A9 102 aa4.73□□□□□ -1.65
USP1-204ENST00000452143 KRTAP2-3P0C7H8 128 aa4.68□□□□□ -1.66
USP1-204ENST00000452143 KRTAP2-4Q9BYR9 128 aa4.68□□□□□ -1.66
USP1-204ENST00000452143 CYP4F30PQ9H0H9 118 aa4.68□□□□□ -1.66
USP1-204ENST00000452143 H0YAA0 97 aa4.67□□□□□ -1.66
USP1-204ENST00000452143 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
USP1-204ENST00000452143 KRTAP5-11Q6L8G4 156 aa4.66□□□□□ -1.66
USP1-204ENST00000452143 PRO0461Q9UI25 63 aa4.66□□□□□ -1.66
USP1-204ENST00000452143 A0A087WVE0 104 aa4.65□□□□□ -1.67
USP1-204ENST00000452143 TRAV22A0A0B4J277 110 aa4.65□□□□□ -1.67
USP1-204ENST00000452143 LOC101927531A0A1B0GV80 90 aa4.65□□□□□ -1.67
USP1-204ENST00000452143 PRO2289Q9P1D8 64 aa4.65□□□□□ -1.67
USP1-204ENST00000452143 SPRR2FQ96RM1 72 aa4.64□□□□□ -1.67
USP1-204ENST00000452143 K7EP34 96 aa4.61□□□□□ -1.67
USP1-204ENST00000452143 NDUFC1O43677 76 aa4.61□□□□□ -1.67
USP1-204ENST00000452143 SPRR2EP22531 72 aa4.61□□□□□ -1.67
USP1-204ENST00000452143 SPRR2BP35325 72 aa4.61□□□□□ -1.67
USP1-204ENST00000452143 SPRR2AP35326 72 aa4.61□□□□□ -1.67
USP1-204ENST00000452143 A8MUN3 132 aa4.6□□□□□ -1.67
USP1-204ENST00000452143 COL5A1-AS1Q5SY13 56 aa4.58□□□□□ -1.68
USP1-204ENST00000452143 MT1XP80297 61 aa4.57□□□□□ -1.68
USP1-204ENST00000452143 ATOX1O00244 68 aa4.56□□□□□ -1.68
USP1-204ENST00000452143 ADM2Q7Z4H4 148 aa4.56□□□□□ -1.68
USP1-204ENST00000452143 KRTAP8-1Q8IUC2 63 aa4.56□□□□□ -1.68
USP1-204ENST00000452143 ACYP1P07311 99 aa4.54□□□□□ -1.68
USP1-204ENST00000452143 KRTAP12-2P59991 146 aa4.54□□□□□ -1.68
USP1-204ENST00000452143 PLAC4Q8WY50 150 aa4.54□□□□□ -1.68
USP1-204ENST00000452143 F8W1H4 67 aa4.53□□□□□ -1.68
USP1-204ENST00000452143 UQCRQO14949 82 aa4.53□□□□□ -1.68
USP1-204ENST00000452143 PCP4P48539 62 aa4.53□□□□□ -1.68
USP1-204ENST00000452143 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
USP1-204ENST00000452143 H0Y9P7 68 aa4.52□□□□□ -1.69
USP1-204ENST00000452143 GTF2H5Q6ZYL4 71 aa4.52□□□□□ -1.69
USP1-204ENST00000452143 LOC105371267A0A1B0GV96 52 aa4.51□□□□□ -1.69
USP1-204ENST00000452143 ETDBQ3ZM63 59 aa4.51□□□□□ -1.69
USP1-204ENST00000452143 ATP5EP2Q5VTU8 51 aa4.51□□□□□ -1.69
USP1-204ENST00000452143 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
USP1-204ENST00000452143 KRTAP2-1Q9BYU5 128 aa4.51□□□□□ -1.69
USP1-204ENST00000452143 R4GN34 69 aa4.49□□□□□ -1.69
USP1-204ENST00000452143 C20orf197Q8N268 126 aa4.48□□□□□ -1.69
USP1-204ENST00000452143 SPRR2DP22532 72 aa4.46□□□□□ -1.7
USP1-204ENST00000452143 HIST1H4AP62805 103 aaKnown RBP4.46□□□□□ -1.7
USP1-204ENST00000452143 FAM240AA0A1B0GVK7 77 aa4.45□□□□□ -1.7
USP1-204ENST00000452143 M0QZ58 72 aa4.43□□□□□ -1.7
USP1-204ENST00000452143 P0C880 135 aa4.42□□□□□ -1.7
USP1-204ENST00000452143 LINC00208Q96KT6 92 aa4.42□□□□□ -1.7
USP1-204ENST00000452143 MP68P56378 58 aa4.39□□□□□ -1.71
USP1-204ENST00000452143 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
USP1-204ENST00000452143 LINC01554Q52M75 96 aa4.36□□□□□ -1.71
USP1-204ENST00000452143 OCR1Q9BZK8 76 aa4.35□□□□□ -1.71
USP1-204ENST00000452143 DMAC1Q96GE9 116 aa4.34□□□□□ -1.71
USP1-204ENST00000452143 LINC00643Q86TS7 51 aa4.33□□□□□ -1.72
USP1-204ENST00000452143 H3BPC8 53 aa4.31□□□□□ -1.72
USP1-204ENST00000452143 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
USP1-204ENST00000452143 GPR98Q8WXG9 6306 aa4.3□□□□□ -1.72
USP1-204ENST00000452143 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
USP1-204ENST00000452143 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
USP1-204ENST00000452143 TRAV7A0A075B6U4 112 aa4.26□□□□□ -1.73
USP1-204ENST00000452143 MT-ATP8P03928 68 aa4.25□□□□□ -1.73
USP1-204ENST00000452143 PCP4L1A6NKN8 68 aa4.24□□□□□ -1.73
USP1-204ENST00000452143 SPTSSBQ8NFR3 76 aa4.2□□□□□ -1.74
USP1-204ENST00000452143 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
USP1-204ENST00000452143 ACYP2P14621 99 aa4.18□□□□□ -1.74
USP1-204ENST00000452143 SCGB1A1P11684 91 aa4.17□□□□□ -1.74
USP1-204ENST00000452143 CHKB-CPT1BH3BT56 60 aa4.11□□□□□ -1.75
USP1-204ENST00000452143 KRTAP19-7Q3SYF9 63 aa4.1□□□□□ -1.75
USP1-204ENST00000452143 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
USP1-204ENST00000452143 J3QR89 54 aa4.09□□□□□ -1.75
USP1-204ENST00000452143 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.75
USP1-204ENST00000452143 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.75
USP1-204ENST00000452143 MT1EP04732 61 aa4.08□□□□□ -1.76
USP1-204ENST00000452143 KRTAP4-4Q9BYR3 166 aa4.05□□□□□ -1.76
USP1-204ENST00000452143 KRTAP13-4Q3LI77 160 aa4.04□□□□□ -1.76
USP1-204ENST00000452143 SMIM20Q8N5G0 67 aa4.04□□□□□ -1.76
USP1-204ENST00000452143 CYSTM1Q9H1C7 97 aa4.01□□□□□ -1.77
USP1-204ENST00000452143 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
USP1-204ENST00000452143 A0A1B0GV90 55 aa4□□□□□ -1.77
USP1-204ENST00000452143 SPANXA2-OT1Q8N9U9 137 aa3.98□□□□□ -1.77
USP1-204ENST00000452143 MT1GP13640 62 aa3.97□□□□□ -1.77
USP1-204ENST00000452143 PP632Q6XCG6 107 aa3.96□□□□□ -1.78
USP1-204ENST00000452143 A0A0D9SG42 100 aa3.95□□□□□ -1.78
USP1-204ENST00000452143 SNURFQ9Y675 71 aa3.94□□□□□ -1.78
USP1-204ENST00000452143 KRTAP19-5Q3LI72 72 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms