RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 ATOX1O00244 68 aa9.79□□□□□ -0.84
CPSF7-208ENST00000450000 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
CPSF7-208ENST00000450000 H0Y9P7 68 aa9.77□□□□□ -0.85
CPSF7-208ENST00000450000 CRIPTQ9P021 101 aa9.77□□□□□ -0.85
CPSF7-208ENST00000450000 FAM240AA0A1B0GVK7 77 aa9.76□□□□□ -0.85
CPSF7-208ENST00000450000 IMUPQ9GZP8 106 aa9.76□□□□□ -0.85
CPSF7-208ENST00000450000 NDUFC1O43677 76 aa9.75□□□□□ -0.85
CPSF7-208ENST00000450000 A0A087WVE0 104 aa9.73□□□□□ -0.85
CPSF7-208ENST00000450000 KRTAP10-5P60370 271 aa9.66□□□□□ -0.86
CPSF7-208ENST00000450000 A8MUN3 132 aa9.63□□□□□ -0.87
CPSF7-208ENST00000450000 LINC00643Q86TS7 51 aa9.62□□□□□ -0.87
CPSF7-208ENST00000450000 LINC00208Q96KT6 92 aa9.6□□□□□ -0.87
CPSF7-208ENST00000450000 MP68P56378 58 aa9.59□□□□□ -0.87
CPSF7-208ENST00000450000 H0YAA0 97 aa9.58□□□□□ -0.88
CPSF7-208ENST00000450000 NEBP20929 6669 aa9.55□□□□□ -0.88
CPSF7-208ENST00000450000 ADM2Q7Z4H4 148 aa9.55□□□□□ -0.88
CPSF7-208ENST00000450000 OCR1Q9BZK8 76 aa9.43□□□□□ -0.9
CPSF7-208ENST00000450000 MUC12Q9UKN1 5478 aa9.4□□□□□ -0.9
CPSF7-208ENST00000450000 PRO2289Q9P1D8 64 aa9.4□□□□□ -0.9
CPSF7-208ENST00000450000 PLAC4Q8WY50 150 aa9.39□□□□□ -0.91
CPSF7-208ENST00000450000 SCGB1A1P11684 91 aa9.38□□□□□ -0.91
CPSF7-208ENST00000450000 C20orf197Q8N268 126 aa9.38□□□□□ -0.91
CPSF7-208ENST00000450000 H3BPC8 53 aa9.37□□□□□ -0.91
CPSF7-208ENST00000450000 J3QR89 54 aa9.36□□□□□ -0.91
CPSF7-208ENST00000450000 R4GN34 69 aa9.36□□□□□ -0.91
CPSF7-208ENST00000450000 A0A1B0GV90 55 aa9.34□□□□□ -0.91
CPSF7-208ENST00000450000 KRTAP5-9P26371 169 aa9.34□□□□□ -0.91
CPSF7-208ENST00000450000 KRTAP20-1Q3LI63 56 aa9.29□□□□□ -0.92
CPSF7-208ENST00000450000 M0QZ58 72 aa9.26□□□□□ -0.93
CPSF7-208ENST00000450000 DMAC1Q96GE9 116 aa9.26□□□□□ -0.93
CPSF7-208ENST00000450000 P0C880 135 aa9.23□□□□□ -0.93
CPSF7-208ENST00000450000 KMT2DO14686 5537 aa9.18□□□□□ -0.94
CPSF7-208ENST00000450000 MT1XP80297 61 aa9.18□□□□□ -0.94
CPSF7-208ENST00000450000 LINC01554Q52M75 96 aa9.18□□□□□ -0.94
CPSF7-208ENST00000450000 SPRR2FQ96RM1 72 aa9.15□□□□□ -0.94
CPSF7-208ENST00000450000 MDN1Q9NU22 5596 aa9.13□□□□□ -0.95
CPSF7-208ENST00000450000 TRAV7A0A075B6U4 112 aa9.11□□□□□ -0.95
CPSF7-208ENST00000450000 ACYP2P14621 99 aa9.1□□□□□ -0.95
CPSF7-208ENST00000450000 KRTAP8-1Q8IUC2 63 aa9.09□□□□□ -0.95
CPSF7-208ENST00000450000 SPTSSBQ8NFR3 76 aa9.09□□□□□ -0.95
CPSF7-208ENST00000450000 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
CPSF7-208ENST00000450000 SPRR2EP22531 72 aa9.05□□□□□ -0.96
CPSF7-208ENST00000450000 SPRR2BP35325 72 aa9.05□□□□□ -0.96
CPSF7-208ENST00000450000 SPRR2AP35326 72 aa9.05□□□□□ -0.96
CPSF7-208ENST00000450000 MT-ATP8P03928 68 aa9.02□□□□□ -0.97
CPSF7-208ENST00000450000 KRTAP12-2P59991 146 aa9.02□□□□□ -0.97
CPSF7-208ENST00000450000 SMIM20Q8N5G0 67 aa9.02□□□□□ -0.97
CPSF7-208ENST00000450000 CHKB-CPT1BH3BT56 60 aa9.01□□□□□ -0.97
CPSF7-208ENST00000450000 KRTAP2-3P0C7H8 128 aa9□□□□□ -0.97
CPSF7-208ENST00000450000 KRTAP2-4Q9BYR9 128 aa9□□□□□ -0.97
CPSF7-208ENST00000450000 K7ERU9 68 aa8.89□□□□□ -0.99
CPSF7-208ENST00000450000 KRTAP4-8A0A0G2JLE6 195 aa8.84□□□□□ -0.99
CPSF7-208ENST00000450000 KRTAP4-8Q9BYQ9 185 aa8.84□□□□□ -0.99
CPSF7-208ENST00000450000 LCE1AQ5T7P2 110 aa8.82□□□□□ -1
CPSF7-208ENST00000450000 SNURFQ9Y675 71 aa8.82□□□□□ -1
CPSF7-208ENST00000450000 KRTAP10-7P60409 375 aaPredicted RBP8.78□□□□□ -1
CPSF7-208ENST00000450000 SPRR2DP22532 72 aa8.76□□□□□ -1.01
CPSF7-208ENST00000450000 KRTAP10-12P60413 245 aa8.73□□□□□ -1.01
CPSF7-208ENST00000450000 SPANXA2-OT1Q8N9U9 137 aa8.71□□□□□ -1.02
CPSF7-208ENST00000450000 KRTAP2-2Q9BYT5 123 aa8.71□□□□□ -1.02
CPSF7-208ENST00000450000 KRTAP2-1Q9BYU5 128 aa8.71□□□□□ -1.02
CPSF7-208ENST00000450000 CAMK2N1Q7Z7J9 78 aa8.64□□□□□ -1.03
CPSF7-208ENST00000450000 SERP2Q8N6R1 65 aa8.61□□□□□ -1.03
CPSF7-208ENST00000450000 SEC61GP60059 68 aa8.55□□□□□ -1.04
CPSF7-208ENST00000450000 KRTAP13-4Q3LI77 160 aa8.53□□□□□ -1.04
CPSF7-208ENST00000450000 LCE3BQ5TA77 95 aa8.51□□□□□ -1.05
CPSF7-208ENST00000450000 SERP1Q9Y6X1 66 aa8.51□□□□□ -1.05
CPSF7-208ENST00000450000 COA5Q86WW8 74 aa8.49□□□□□ -1.05
CPSF7-208ENST00000450000 A0A0D9SG42 100 aa8.41□□□□□ -1.06
CPSF7-208ENST00000450000 SPINT4Q6UDR6 99 aa8.33□□□□□ -1.08
CPSF7-208ENST00000450000 A0A1B0GU33 70 aa8.3□□□□□ -1.08
CPSF7-208ENST00000450000 SPATA8Q6RVD6 105 aa8.3□□□□□ -1.08
CPSF7-208ENST00000450000 COX7CP15954 63 aa8.29□□□□□ -1.08
CPSF7-208ENST00000450000 KRTAP19-7Q3SYF9 63 aa8.19□□□□□ -1.1
CPSF7-208ENST00000450000 H7BZZ5 65 aa8.16□□□□□ -1.1
CPSF7-208ENST00000450000 MT1EP04732 61 aa8.16□□□□□ -1.1
CPSF7-208ENST00000450000 KRTAP19-3Q7Z4W3 81 aa8.15□□□□□ -1.1
CPSF7-208ENST00000450000 LCE5AQ5TCM9 118 aa8.14□□□□□ -1.11
CPSF7-208ENST00000450000 A0A1B0GU69 56 aa8.13□□□□□ -1.11
CPSF7-208ENST00000450000 SMIM26A0A096LP01 95 aa8.12□□□□□ -1.11
CPSF7-208ENST00000450000 KRTAP12-1P59990 96 aa8.11□□□□□ -1.11
CPSF7-208ENST00000450000 CYSTM1Q9H1C7 97 aa8.07□□□□□ -1.12
CPSF7-208ENST00000450000 DSTQ03001 7570 aaKnown RBP8.06□□□□□ -1.12
CPSF7-208ENST00000450000 KRTAP19-5Q3LI72 72 aa8.02□□□□□ -1.13
CPSF7-208ENST00000450000 PP632Q6XCG6 107 aa7.99□□□□□ -1.13
CPSF7-208ENST00000450000 MT1GP13640 62 aa7.97□□□□□ -1.13
CPSF7-208ENST00000450000 ANAPC13Q9BS18 74 aa7.97□□□□□ -1.13
CPSF7-208ENST00000450000 A8MU10 97 aa7.95□□□□□ -1.14
CPSF7-208ENST00000450000 KRTAP4-9Q9BYQ8 210 aa7.93□□□□□ -1.14
CPSF7-208ENST00000450000 PRR15LQ9BU68 103 aa7.9□□□□□ -1.14
CPSF7-208ENST00000450000 TNP1P09430 55 aa7.89□□□□□ -1.15
CPSF7-208ENST00000450000 GPR98Q8WXG9 6306 aa7.83□□□□□ -1.16
CPSF7-208ENST00000450000 MT1MQ8N339 61 aa7.79□□□□□ -1.16
CPSF7-208ENST00000450000 ATP5EP56381 51 aaPredicted RBP7.78□□□□□ -1.16
CPSF7-208ENST00000450000 LCE3AQ5TA76 89 aa7.78□□□□□ -1.16
CPSF7-208ENST00000450000 MT1LQ93083 61 aa7.78□□□□□ -1.16
CPSF7-208ENST00000450000 C10orf95Q9H7T3 257 aa7.78□□□□□ -1.16
CPSF7-208ENST00000450000 CCDC179H3BU77 68 aa7.74□□□□□ -1.17
CPSF7-208ENST00000450000 LCE4AQ5TA78 99 aa7.71□□□□□ -1.18
CPSF7-208ENST00000450000 LCE1DQ5T752 114 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms