RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 MT1FP04733 61 aa7.09□□□□□ -1.27
USP39-206ENST00000448971 H1FX-AS1Q4G0G2 97 aa7.08□□□□□ -1.28
USP39-206ENST00000448971 C4orf26Q17RF5 130 aa7.07□□□□□ -1.28
USP39-206ENST00000448971 MACF1Q9UPN3 7388 aaKnown RBP7.06□□□□□ -1.28
USP39-206ENST00000448971 SYNE2Q8WXH0 6885 aaKnown RBP7.05□□□□□ -1.28
USP39-206ENST00000448971 LINC00643Q86TS7 51 aa7.05□□□□□ -1.28
USP39-206ENST00000448971 TRAV22A0A0B4J277 110 aa7.02□□□□□ -1.29
USP39-206ENST00000448971 A0A087WVE0 104 aa7.01□□□□□ -1.29
USP39-206ENST00000448971 A0A0A0MQY5 61 aa7.01□□□□□ -1.29
USP39-206ENST00000448971 J3QR89 54 aa7.01□□□□□ -1.29
USP39-206ENST00000448971 KRTAP10-10P60014 251 aa7.01□□□□□ -1.29
USP39-206ENST00000448971 LOC101927531A0A1B0GV80 90 aa6.96□□□□□ -1.3
USP39-206ENST00000448971 UQCRQO14949 82 aa6.95□□□□□ -1.3
USP39-206ENST00000448971 C1orf64Q8NEQ6 169 aa6.95□□□□□ -1.3
USP39-206ENST00000448971 KRTAP19-6Q3LI70 58 aa6.94□□□□□ -1.3
USP39-206ENST00000448971 H0Y9P7 68 aa6.93□□□□□ -1.3
USP39-206ENST00000448971 CYP4F30PQ9H0H9 118 aa6.93□□□□□ -1.3
USP39-206ENST00000448971 ATOX1O00244 68 aa6.92□□□□□ -1.3
USP39-206ENST00000448971 S4R3F8 94 aa6.91□□□□□ -1.3
USP39-206ENST00000448971 C5orf47Q569G3 176 aa6.88□□□□□ -1.31
USP39-206ENST00000448971 KRTAP5-3Q6L8H2 238 aa6.85□□□□□ -1.31
USP39-206ENST00000448971 KRTAP6-3Q3LI67 103 aa6.84□□□□□ -1.31
USP39-206ENST00000448971 LCA10Q71F78 164 aa6.84□□□□□ -1.31
USP39-206ENST00000448971 MP68P56378 58 aa6.83□□□□□ -1.32
USP39-206ENST00000448971 LINC00208Q96KT6 92 aa6.82□□□□□ -1.32
USP39-206ENST00000448971 OCR1Q9BZK8 76 aa6.82□□□□□ -1.32
USP39-206ENST00000448971 CSAG1Q6PB30 78 aa6.81□□□□□ -1.32
USP39-206ENST00000448971 K7ERU9 68 aa6.8□□□□□ -1.32
USP39-206ENST00000448971 SCGB1A1P11684 91 aa6.8□□□□□ -1.32
USP39-206ENST00000448971 FAM236AA0A1B0GUQ0 79 aa6.79□□□□□ -1.32
USP39-206ENST00000448971 FAM236BA0A1B0GV22 79 aa6.79□□□□□ -1.32
USP39-206ENST00000448971 KLKP1Q107X0 134 aa6.74□□□□□ -1.33
USP39-206ENST00000448971 MT-ATP8P03928 68 aa6.73□□□□□ -1.33
USP39-206ENST00000448971 IMUPQ9GZP8 106 aa6.72□□□□□ -1.33
USP39-206ENST00000448971 A8MUN3 132 aa6.71□□□□□ -1.34
USP39-206ENST00000448971 H3BPC8 53 aa6.71□□□□□ -1.34
USP39-206ENST00000448971 NDUFC1O43677 76 aa6.67□□□□□ -1.34
USP39-206ENST00000448971 NEBP20929 6669 aa6.66□□□□□ -1.34
USP39-206ENST00000448971 MUC12Q9UKN1 5478 aa6.64□□□□□ -1.35
USP39-206ENST00000448971 SMIM20Q8N5G0 67 aa6.62□□□□□ -1.35
USP39-206ENST00000448971 TRAV7A0A075B6U4 112 aa6.59□□□□□ -1.35
USP39-206ENST00000448971 DMAC1Q96GE9 116 aa6.57□□□□□ -1.36
USP39-206ENST00000448971 SPRR2GQ9BYE4 73 aa6.54□□□□□ -1.36
USP39-206ENST00000448971 H0YAA0 97 aa6.53□□□□□ -1.36
USP39-206ENST00000448971 Q5VV11 94 aa6.52□□□□□ -1.37
USP39-206ENST00000448971 CRIPTQ9P021 101 aa6.52□□□□□ -1.37
USP39-206ENST00000448971 ADM2Q7Z4H4 148 aa6.5□□□□□ -1.37
USP39-206ENST00000448971 KRTAP19-8Q3LI54 63 aa6.47□□□□□ -1.37
USP39-206ENST00000448971 KRTAP20-1Q3LI63 56 aa6.47□□□□□ -1.37
USP39-206ENST00000448971 SNURFQ9Y675 71 aa6.47□□□□□ -1.37
USP39-206ENST00000448971 MT1BP07438 61 aa6.46□□□□□ -1.38
USP39-206ENST00000448971 A6NN06 94 aa6.44□□□□□ -1.38
USP39-206ENST00000448971 ACYP2P14621 99 aa6.44□□□□□ -1.38
USP39-206ENST00000448971 C20orf197Q8N268 126 aa6.43□□□□□ -1.38
USP39-206ENST00000448971 SERP2Q8N6R1 65 aa6.43□□□□□ -1.38
USP39-206ENST00000448971 KMT2DO14686 5537 aa6.41□□□□□ -1.38
USP39-206ENST00000448971 MDN1Q9NU22 5596 aa6.39□□□□□ -1.39
USP39-206ENST00000448971 CHKB-CPT1BH3BT56 60 aa6.39□□□□□ -1.39
USP39-206ENST00000448971 KRTAP5-9P26371 169 aa6.39□□□□□ -1.39
USP39-206ENST00000448971 SPTSSBQ8NFR3 76 aa6.37□□□□□ -1.39
USP39-206ENST00000448971 P0C880 135 aa6.35□□□□□ -1.39
USP39-206ENST00000448971 R4GN34 69 aa6.35□□□□□ -1.39
USP39-206ENST00000448971 SPANXA2-OT1Q8N9U9 137 aa6.34□□□□□ -1.39
USP39-206ENST00000448971 KRTAP10-5P60370 271 aa6.33□□□□□ -1.4
USP39-206ENST00000448971 M0QZ58 72 aa6.31□□□□□ -1.4
USP39-206ENST00000448971 COX7CP15954 63 aa6.27□□□□□ -1.41
USP39-206ENST00000448971 KRTAP2-3P0C7H8 128 aa6.23□□□□□ -1.41
USP39-206ENST00000448971 LINC01554Q52M75 96 aa6.23□□□□□ -1.41
USP39-206ENST00000448971 KRTAP2-4Q9BYR9 128 aa6.23□□□□□ -1.41
USP39-206ENST00000448971 PLAC4Q8WY50 150 aa6.22□□□□□ -1.41
USP39-206ENST00000448971 COA5Q86WW8 74 aa6.18□□□□□ -1.42
USP39-206ENST00000448971 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
USP39-206ENST00000448971 ANAPC13Q9BS18 74 aa6.16□□□□□ -1.42
USP39-206ENST00000448971 CYSTM1Q9H1C7 97 aa6.14□□□□□ -1.43
USP39-206ENST00000448971 H7BZZ5 65 aa6.13□□□□□ -1.43
USP39-206ENST00000448971 MT1XP80297 61 aa6.1□□□□□ -1.43
USP39-206ENST00000448971 SPRR2FQ96RM1 72 aa6.06□□□□□ -1.44
USP39-206ENST00000448971 SPRR2EP22531 72 aa6.05□□□□□ -1.44
USP39-206ENST00000448971 SPRR2BP35325 72 aa6.05□□□□□ -1.44
USP39-206ENST00000448971 SPRR2AP35326 72 aa6.05□□□□□ -1.44
USP39-206ENST00000448971 SEC61GP60059 68 aa6.05□□□□□ -1.44
USP39-206ENST00000448971 KRTAP2-2Q9BYT5 123 aa6.02□□□□□ -1.45
USP39-206ENST00000448971 KRTAP2-1Q9BYU5 128 aa6.02□□□□□ -1.45
USP39-206ENST00000448971 SERP1Q9Y6X1 66 aa6.02□□□□□ -1.45
USP39-206ENST00000448971 CCDC179H3BU77 68 aa6□□□□□ -1.45
USP39-206ENST00000448971 LCE1AQ5T7P2 110 aa6□□□□□ -1.45
USP39-206ENST00000448971 KRTAP13-4Q3LI77 160 aa5.99□□□□□ -1.45
USP39-206ENST00000448971 ATP5EP56381 51 aaPredicted RBP5.92□□□□□ -1.46
USP39-206ENST00000448971 KRTAP12-2P59991 146 aa5.92□□□□□ -1.46
USP39-206ENST00000448971 KRTAP8-1Q8IUC2 63 aa5.91□□□□□ -1.46
USP39-206ENST00000448971 A0A0D9SG42 100 aa5.88□□□□□ -1.47
USP39-206ENST00000448971 A0A1B0GU33 70 aa5.88□□□□□ -1.47
USP39-206ENST00000448971 A0A1B0GU69 56 aa5.88□□□□□ -1.47
USP39-206ENST00000448971 CAMK2N1Q7Z7J9 78 aa5.88□□□□□ -1.47
USP39-206ENST00000448971 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
USP39-206ENST00000448971 SPRR2DP22532 72 aa5.85□□□□□ -1.47
USP39-206ENST00000448971 KRTAP10-7P60409 375 aaPredicted RBP5.84□□□□□ -1.47
USP39-206ENST00000448971 TMEM258P61165 79 aa5.81□□□□□ -1.48
USP39-206ENST00000448971 PRAC1Q96KF2 57 aa5.81□□□□□ -1.48
USP39-206ENST00000448971 SPINT4Q6UDR6 99 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms