RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 DNAH5Q8TE73 4624 aa2.76□□□□□ -1.97
CDC42BPA-209ENST00000448940 CRCT1Q9UGL9 99 aa2.76□□□□□ -1.97
CDC42BPA-209ENST00000448940 DNAH1Q9P2D7 4330 aa2.75□□□□□ -1.97
CDC42BPA-209ENST00000448940 DNAH9Q9NYC9 4486 aa2.75□□□□□ -1.97
CDC42BPA-209ENST00000448940 HUWE1Q7Z6Z7 4374 aaKnown RBP2.74□□□□□ -1.97
CDC42BPA-209ENST00000448940 RYR3Q15413 4870 aa2.74□□□□□ -1.97
CDC42BPA-209ENST00000448940 INE1O15225 51 aa2.73□□□□□ -1.97
CDC42BPA-209ENST00000448940 KRTAP9-6A0A140TA67 174 aa2.73□□□□□ -1.97
CDC42BPA-209ENST00000448940 HYDINQ4G0P3 5121 aa2.72□□□□□ -1.97
CDC42BPA-209ENST00000448940 LCE2CQ5TA81 110 aa2.72□□□□□ -1.97
CDC42BPA-209ENST00000448940 DNAH3Q8TD57 4116 aa2.71□□□□□ -1.98
CDC42BPA-209ENST00000448940 LCE2BO14633 110 aa2.71□□□□□ -1.98
CDC42BPA-209ENST00000448940 KRTAP8-1Q8IUC2 63 aa2.71□□□□□ -1.98
CDC42BPA-209ENST00000448940 HERC2O95714 4834 aa2.7□□□□□ -1.98
CDC42BPA-209ENST00000448940 KRTAP9-2Q9BYQ4 174 aa2.69□□□□□ -1.98
CDC42BPA-209ENST00000448940 CSMD3Q7Z407 3707 aa2.69□□□□□ -1.98
CDC42BPA-209ENST00000448940 DYNC1H1Q14204 4646 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-209ENST00000448940 DNAH10Q8IVF4 4471 aa2.66□□□□□ -1.98
CDC42BPA-209ENST00000448940 ANK2Q01484 3957 aa2.64□□□□□ -1.99
CDC42BPA-209ENST00000448940 PCLOQ9Y6V0 5065 aa2.64□□□□□ -1.99
CDC42BPA-209ENST00000448940 RYR2Q92736 4967 aa2.64□□□□□ -1.99
CDC42BPA-209ENST00000448940 PRKDCP78527 4128 aaKnown RBP2.64□□□□□ -1.99
CDC42BPA-209ENST00000448940 DNAH17Q9UFH2 4485 aa2.63□□□□□ -1.99
CDC42BPA-209ENST00000448940 SPRR2FQ96RM1 72 aa2.63□□□□□ -1.99
CDC42BPA-209ENST00000448940 DYNC2H1Q8NCM8 4307 aaKnown RBP2.62□□□□□ -1.99
CDC42BPA-209ENST00000448940 SPRR5A0A1B0GTR4 108 aa2.62□□□□□ -1.99
CDC42BPA-209ENST00000448940 SPRR2EP22531 72 aa2.6□□□□□ -1.99
CDC42BPA-209ENST00000448940 SPRR2BP35325 72 aa2.6□□□□□ -1.99
CDC42BPA-209ENST00000448940 SPRR2AP35326 72 aa2.6□□□□□ -1.99
CDC42BPA-209ENST00000448940 KRTAP10-6P60371 365 aaPredicted RBP2.6□□□□□ -1.99
CDC42BPA-209ENST00000448940 LYSTQ99698 3801 aa2.6□□□□□ -1.99
CDC42BPA-209ENST00000448940 KRTAP10-7P60409 375 aaPredicted RBP2.6□□□□□ -1.99
CDC42BPA-209ENST00000448940 MT1HP80294 61 aa2.59□□□□□ -1.99
CDC42BPA-209ENST00000448940 FAT1Q14517 4588 aa2.59□□□□□ -2
CDC42BPA-209ENST00000448940 LRP1BQ9NZR2 4599 aa2.58□□□□□ -2
CDC42BPA-209ENST00000448940 KRTAP12-2P59991 146 aa2.57□□□□□ -2
CDC42BPA-209ENST00000448940 STARD9Q9P2P6 4700 aa2.55□□□□□ -2
CDC42BPA-209ENST00000448940 EPPK1P58107 5090 aaKnown RBP2.54□□□□□ -2
CDC42BPA-209ENST00000448940 SACSQ9NZJ4 4579 aa2.54□□□□□ -2
CDC42BPA-209ENST00000448940 ABCA13Q86UQ4 5058 aa2.53□□□□□ -2
CDC42BPA-209ENST00000448940 KRTAP4-1Q9BYQ7 146 aa2.53□□□□□ -2
CDC42BPA-209ENST00000448940 VPS13DQ5THJ4 4388 aa2.53□□□□□ -2
CDC42BPA-209ENST00000448940 SPRR2DP22532 72 aa2.52□□□□□ -2.01
CDC42BPA-209ENST00000448940 KMT2AQ03164 3969 aa2.52□□□□□ -2.01
CDC42BPA-209ENST00000448940 HERC1Q15751 4861 aa2.51□□□□□ -2.01
CDC42BPA-209ENST00000448940 VPS13BQ7Z7G8 4022 aa2.5□□□□□ -2.01
CDC42BPA-209ENST00000448940 KRTAP10-12P60413 245 aa2.5□□□□□ -2.01
CDC42BPA-209ENST00000448940 KMT2CQ8NEZ4 4911 aaKnown RBP2.5□□□□□ -2.01
CDC42BPA-209ENST00000448940 UBR4Q5T4S7 5183 aa2.5□□□□□ -2.01
CDC42BPA-209ENST00000448940 KRTAP9-7A8MTY7 169 aa2.49□□□□□ -2.01
CDC42BPA-209ENST00000448940 MT2AP02795 61 aa2.49□□□□□ -2.01
CDC42BPA-209ENST00000448940 KRTAP15-1Q3LI76 137 aa2.49□□□□□ -2.01
CDC42BPA-209ENST00000448940 KRTAP13-4Q3LI77 160 aa2.49□□□□□ -2.01
CDC42BPA-209ENST00000448940 FAT2Q9NYQ8 4349 aa2.48□□□□□ -2.01
CDC42BPA-209ENST00000448940 KRTAP3-1Q9BYR8 98 aa2.48□□□□□ -2.01
CDC42BPA-209ENST00000448940 DNAH2Q9P225 4427 aa2.48□□□□□ -2.01
CDC42BPA-209ENST00000448940 APOBP04114 4563 aaKnown RBP2.46□□□□□ -2.02
CDC42BPA-209ENST00000448940 CMYA5Q8N3K9 4069 aa2.46□□□□□ -2.02
CDC42BPA-209ENST00000448940 KRTAP19-4Q3LI73 84 aa2.45□□□□□ -2.02
CDC42BPA-209ENST00000448940 KRTAP20-1Q3LI63 56 aa2.44□□□□□ -2.02
CDC42BPA-209ENST00000448940 LCE2AQ5TA79 106 aaPredicted RBP2.44□□□□□ -2.02
CDC42BPA-209ENST00000448940 DNAH8Q96JB1 4490 aa2.43□□□□□ -2.02
CDC42BPA-209ENST00000448940 MT1FP04733 61 aa2.42□□□□□ -2.02
CDC42BPA-209ENST00000448940 FRAS1Q86XX4 4008 aa2.41□□□□□ -2.02
CDC42BPA-209ENST00000448940 KRTAP19-1Q8IUB9 90 aa2.41□□□□□ -2.02
CDC42BPA-209ENST00000448940 DNAH6Q9C0G6 4158 aa2.4□□□□□ -2.02
CDC42BPA-209ENST00000448940 DNAH7Q8WXX0 4024 aa2.4□□□□□ -2.03
CDC42BPA-209ENST00000448940 KRTAP12-1P59990 96 aa2.39□□□□□ -2.03
CDC42BPA-209ENST00000448940 LRP2P98164 4655 aa2.38□□□□□ -2.03
CDC42BPA-209ENST00000448940 PKD1P98161 4303 aa2.38□□□□□ -2.03
CDC42BPA-209ENST00000448940 RNF213Q63HN8 5207 aa2.37□□□□□ -2.03
CDC42BPA-209ENST00000448940 FAT3Q8TDW7 4589 aa2.37□□□□□ -2.03
CDC42BPA-209ENST00000448940 MT3P25713 68 aa2.36□□□□□ -2.03
CDC42BPA-209ENST00000448940 HECTD4Q9Y4D8 3996 aa2.36□□□□□ -2.03
CDC42BPA-209ENST00000448940 LRP1Q07954 4544 aaKnown RBP2.34□□□□□ -2.03
CDC42BPA-209ENST00000448940 MYCBP2O75592 4640 aa2.34□□□□□ -2.03
CDC42BPA-209ENST00000448940 HMCN2Q8NDA2 5059 aa2.34□□□□□ -2.03
CDC42BPA-209ENST00000448940 FSIP2Q5CZC0 6907 aa2.34□□□□□ -2.04
CDC42BPA-209ENST00000448940 PKHD1P08F94 4074 aa2.33□□□□□ -2.04
CDC42BPA-209ENST00000448940 PKHD1L1Q86WI1 4243 aa2.32□□□□□ -2.04
CDC42BPA-209ENST00000448940 SPRR2GQ9BYE4 73 aa2.32□□□□□ -2.04
CDC42BPA-209ENST00000448940 HSPG2P98160 4391 aa2.32□□□□□ -2.04
CDC42BPA-209ENST00000448940 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
CDC42BPA-209ENST00000448940 KRTAP10-5P60370 271 aa2.3□□□□□ -2.04
CDC42BPA-209ENST00000448940 KRTAP9-8Q9BYQ0 159 aa2.28□□□□□ -2.05
CDC42BPA-209ENST00000448940 KRTAP12-3P60328 96 aa2.27□□□□□ -2.05
CDC42BPA-209ENST00000448940 MT4P47944 62 aa2.27□□□□□ -2.05
CDC42BPA-209ENST00000448940 LCE3BQ5TA77 95 aa2.27□□□□□ -2.05
CDC42BPA-209ENST00000448940 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.26□□□□□ -2.05
CDC42BPA-209ENST00000448940 KRTAP9-3Q9BYQ3 159 aa2.24□□□□□ -2.05
CDC42BPA-209ENST00000448940 KRTAP19-8Q3LI54 63 aa2.23□□□□□ -2.05
CDC42BPA-209ENST00000448940 KRTAP2-3P0C7H8 128 aa2.22□□□□□ -2.05
CDC42BPA-209ENST00000448940 KRTAP2-4Q9BYR9 128 aa2.22□□□□□ -2.05
CDC42BPA-209ENST00000448940 FAT4Q6V0I7 4981 aa2.22□□□□□ -2.05
CDC42BPA-209ENST00000448940 SYNE2Q8WXH0 6885 aaKnown RBP2.19□□□□□ -2.06
CDC42BPA-209ENST00000448940 KRTAP19-6Q3LI70 58 aa2.19□□□□□ -2.06
CDC42BPA-209ENST00000448940 LCE3AQ5TA76 89 aa2.19□□□□□ -2.06
CDC42BPA-209ENST00000448940 KRTAP19-2Q3LHN2 52 aa2.17□□□□□ -2.06
CDC42BPA-209ENST00000448940 MT1BP07438 61 aa2.16□□□□□ -2.06
CDC42BPA-209ENST00000448940 KRTAP6-3Q3LI67 103 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 196.2 ms