RNA–Protein interactions for RNA: ENST00000448901.1

LINC01247-201, Transcript of long intergenic non-protein coding RNA 1247, humanhuman

TSL 1 (best) BASIC

Gene LINC01247, Length 4,209 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01247-201ENST00000448901 TENM1Q9UKZ4 2725 aa2.2□□□□□ -2.06
LINC01247-201ENST00000448901 KRTAP19-4Q3LI73 84 aa2.19□□□□□ -2.06
LINC01247-201ENST00000448901 KRTAP1-1Q07627 177 aa2.19□□□□□ -2.06
LINC01247-201ENST00000448901 Q6ZSA8 131 aa2.18□□□□□ -2.06
LINC01247-201ENST00000448901 DNHD1Q96M86 4753 aa2.17□□□□□ -2.06
LINC01247-201ENST00000448901 NBEAL1Q6ZS30 2694 aa2.17□□□□□ -2.06
LINC01247-201ENST00000448901 APLNQ9ULZ1 77 aa2.16□□□□□ -2.06
LINC01247-201ENST00000448901 H1FX-AS1Q4G0G2 97 aa2.16□□□□□ -2.06
LINC01247-201ENST00000448901 Q6ZRN7 208 aaPredicted RBP2.16□□□□□ -2.06
LINC01247-201ENST00000448901 A0A0D9SG42 100 aa2.16□□□□□ -2.06
LINC01247-201ENST00000448901 APOBP04114 4563 aaKnown RBP2.15□□□□□ -2.06
LINC01247-201ENST00000448901 STAB1Q9NY15 2570 aa2.15□□□□□ -2.06
LINC01247-201ENST00000448901 RPL37P61927 97 aaKnown RBP2.15□□□□□ -2.07
LINC01247-201ENST00000448901 FLGP20930 4061 aaPredicted RBP2.14□□□□□ -2.07
LINC01247-201ENST00000448901 KRTAP4-9Q9BYQ8 210 aa2.14□□□□□ -2.07
LINC01247-201ENST00000448901 PRO2289Q9P1D8 64 aa2.14□□□□□ -2.07
LINC01247-201ENST00000448901 SACSQ9NZJ4 4579 aa2.13□□□□□ -2.07
LINC01247-201ENST00000448901 SPRR1AP35321 89 aa2.13□□□□□ -2.07
LINC01247-201ENST00000448901 KRTAP4-12Q9BQ66 201 aa2.12□□□□□ -2.07
LINC01247-201ENST00000448901 PLAC4Q8WY50 150 aa2.12□□□□□ -2.07
LINC01247-201ENST00000448901 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
LINC01247-201ENST00000448901 COX6B2Q6YFQ2 88 aa2.11□□□□□ -2.07
LINC01247-201ENST00000448901 ANAPC11Q9NYG5 84 aa2.1□□□□□ -2.07
LINC01247-201ENST00000448901 TENM3Q9P273 2699 aa2.09□□□□□ -2.08
LINC01247-201ENST00000448901 LCE1FQ5T754 118 aa2.09□□□□□ -2.08
LINC01247-201ENST00000448901 LCE4AQ5TA78 99 aa2.09□□□□□ -2.08
LINC01247-201ENST00000448901 LRP1Q07954 4544 aaKnown RBP2.08□□□□□ -2.08
LINC01247-201ENST00000448901 KRTAP10-3P60369 221 aa2.08□□□□□ -2.08
LINC01247-201ENST00000448901 DNAH5Q8TE73 4624 aa2.08□□□□□ -2.08
LINC01247-201ENST00000448901 COL6A5A8TX70 2615 aa2.07□□□□□ -2.08
LINC01247-201ENST00000448901 KRTAP10-6P60371 365 aaPredicted RBP2.07□□□□□ -2.08
LINC01247-201ENST00000448901 TGP01266 2768 aa2.07□□□□□ -2.08
LINC01247-201ENST00000448901 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
LINC01247-201ENST00000448901 KRTAP13-4Q3LI77 160 aa2.06□□□□□ -2.08
LINC01247-201ENST00000448901 SPRR1BP22528 89 aa2.05□□□□□ -2.08
LINC01247-201ENST00000448901 STARD9Q9P2P6 4700 aa2.05□□□□□ -2.08
LINC01247-201ENST00000448901 FAT3Q8TDW7 4589 aa2.05□□□□□ -2.08
LINC01247-201ENST00000448901 LPAP08519 4548 aa2.04□□□□□ -2.08
LINC01247-201ENST00000448901 KRTAP9-7A8MTY7 169 aa2.04□□□□□ -2.08
LINC01247-201ENST00000448901 KRTAP10-11P60412 298 aa2.04□□□□□ -2.08
LINC01247-201ENST00000448901 PLECQ15149 4684 aaKnown RBP2.04□□□□□ -2.08
LINC01247-201ENST00000448901 DYNC1H1Q14204 4646 aaKnown RBP2.03□□□□□ -2.08
LINC01247-201ENST00000448901 SMR3BP02814 79 aaPredicted RBP2.02□□□□□ -2.09
LINC01247-201ENST00000448901 NOTCH1P46531 2555 aa2.02□□□□□ -2.09
LINC01247-201ENST00000448901 S4R3F8 94 aa2.01□□□□□ -2.09
LINC01247-201ENST00000448901 HERC1Q15751 4861 aa2□□□□□ -2.09
LINC01247-201ENST00000448901 HYDINQ4G0P3 5121 aa2□□□□□ -2.09
LINC01247-201ENST00000448901 C9orf92A6NGG3 77 aa2□□□□□ -2.09
LINC01247-201ENST00000448901 STAB2Q8WWQ8 2551 aa1.99□□□□□ -2.09
LINC01247-201ENST00000448901 LCE3BQ5TA77 95 aa1.99□□□□□ -2.09
LINC01247-201ENST00000448901 LRP1BQ9NZR2 4599 aa1.99□□□□□ -2.09
LINC01247-201ENST00000448901 FAT1Q14517 4588 aa1.98□□□□□ -2.09
LINC01247-201ENST00000448901 M0R2T5 61 aa1.97□□□□□ -2.09
LINC01247-201ENST00000448901 KRTAP19-1Q8IUB9 90 aa1.97□□□□□ -2.09
LINC01247-201ENST00000448901 INE1O15225 51 aa1.96□□□□□ -2.1
LINC01247-201ENST00000448901 KMT2CQ8NEZ4 4911 aaKnown RBP1.95□□□□□ -2.1
LINC01247-201ENST00000448901 KRTAP21-3Q3LHN1 58 aa1.94□□□□□ -2.1
LINC01247-201ENST00000448901 KRTAP13-1Q8IUC0 172 aa1.94□□□□□ -2.1
LINC01247-201ENST00000448901 KRTAP13-2Q52LG2 175 aa1.93□□□□□ -2.1
LINC01247-201ENST00000448901 PP632Q6XCG6 107 aa1.93□□□□□ -2.1
LINC01247-201ENST00000448901 A0A1B0GVY2 172 aa1.92□□□□□ -2.1
LINC01247-201ENST00000448901 KRTAP5-9P26371 169 aa1.92□□□□□ -2.1
LINC01247-201ENST00000448901 KRTAP12-2P59991 146 aa1.92□□□□□ -2.1
LINC01247-201ENST00000448901 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
LINC01247-201ENST00000448901 RYR3Q15413 4870 aa1.91□□□□□ -2.1
LINC01247-201ENST00000448901 Q5VSD8 79 aa1.91□□□□□ -2.1
LINC01247-201ENST00000448901 KRTAP1-4P0C5Y4 121 aa1.91□□□□□ -2.1
LINC01247-201ENST00000448901 RYR2Q92736 4967 aa1.9□□□□□ -2.1
LINC01247-201ENST00000448901 LCE1DQ5T752 114 aa1.9□□□□□ -2.11
LINC01247-201ENST00000448901 LCE1AQ5T7P2 110 aa1.89□□□□□ -2.11
LINC01247-201ENST00000448901 KRTAP4-11Q9BYQ6 195 aa1.88□□□□□ -2.11
LINC01247-201ENST00000448901 KRTAP6-3Q3LI67 103 aa1.87□□□□□ -2.11
LINC01247-201ENST00000448901 KRTAP10-1P60331 282 aa1.87□□□□□ -2.11
LINC01247-201ENST00000448901 KRTAP9-3Q9BYQ3 159 aa1.87□□□□□ -2.11
LINC01247-201ENST00000448901 KRTAP12-1P59990 96 aa1.86□□□□□ -2.11
LINC01247-201ENST00000448901 KRTAP1-5Q9BYS1 174 aa1.86□□□□□ -2.11
LINC01247-201ENST00000448901 RPS29P62273 56 aaKnown RBP1.84□□□□□ -2.11
LINC01247-201ENST00000448901 M0QZ58 72 aa1.83□□□□□ -2.12
LINC01247-201ENST00000448901 EPPK1P58107 5090 aaKnown RBP1.82□□□□□ -2.12
LINC01247-201ENST00000448901 LCE3CQ5T5A8 94 aa1.82□□□□□ -2.12
LINC01247-201ENST00000448901 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
LINC01247-201ENST00000448901 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
LINC01247-201ENST00000448901 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
LINC01247-201ENST00000448901 MT3P25713 68 aa1.79□□□□□ -2.12
LINC01247-201ENST00000448901 MUC17Q685J3 4493 aa1.78□□□□□ -2.12
LINC01247-201ENST00000448901 RYR1P21817 5038 aa1.77□□□□□ -2.13
LINC01247-201ENST00000448901 SYNE1Q8NF91 8797 aaKnown RBP1.77□□□□□ -2.13
LINC01247-201ENST00000448901 KIAA1109Q2LD37 5005 aa1.75□□□□□ -2.13
LINC01247-201ENST00000448901 KRTAP10-10P60014 251 aa1.74□□□□□ -2.13
LINC01247-201ENST00000448901 LCE3EQ5T5B0 92 aa1.73□□□□□ -2.13
LINC01247-201ENST00000448901 TNP1P09430 55 aa1.72□□□□□ -2.13
LINC01247-201ENST00000448901 ABCA13Q86UQ4 5058 aa1.71□□□□□ -2.14
LINC01247-201ENST00000448901 KRTAP5-4Q6L8H1 288 aa1.7□□□□□ -2.14
LINC01247-201ENST00000448901 HERC2O95714 4834 aa1.7□□□□□ -2.14
LINC01247-201ENST00000448901 KRTAP10-4P60372 401 aaPredicted RBP1.7□□□□□ -2.14
LINC01247-201ENST00000448901 PCLOQ9Y6V0 5065 aa1.69□□□□□ -2.14
LINC01247-201ENST00000448901 BIRC6Q9NR09 4857 aa1.69□□□□□ -2.14
LINC01247-201ENST00000448901 KRTAP10-12P60413 245 aa1.67□□□□□ -2.14
LINC01247-201ENST00000448901 MUC2Q02817 5179 aa1.64□□□□□ -2.15
LINC01247-201ENST00000448901 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms