RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 PKHD1L1Q86WI1 4243 aa8.24□□□□□ -1.09
CNOT3-204ENST00000447684 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
CNOT3-204ENST00000447684 S4R3F8 94 aa8.24□□□□□ -1.09
CNOT3-204ENST00000447684 KRTAP3-2Q9BYR7 98 aa8.23□□□□□ -1.09
CNOT3-204ENST00000447684 DNHD1Q96M86 4753 aa8.22□□□□□ -1.09
CNOT3-204ENST00000447684 PKHD1P08F94 4074 aa8.2□□□□□ -1.1
CNOT3-204ENST00000447684 KRTAP12-2P59991 146 aa8.2□□□□□ -1.1
CNOT3-204ENST00000447684 FAT1Q14517 4588 aa8.15□□□□□ -1.1
CNOT3-204ENST00000447684 APOBP04114 4563 aaKnown RBP8.13□□□□□ -1.11
CNOT3-204ENST00000447684 KRTAP10-8P60410 259 aa8.08□□□□□ -1.12
CNOT3-204ENST00000447684 KRTAP12-1P59990 96 aa8.05□□□□□ -1.12
CNOT3-204ENST00000447684 DYNC1H1Q14204 4646 aaKnown RBP8.05□□□□□ -1.12
CNOT3-204ENST00000447684 KRTAP10-4P60372 401 aaPredicted RBP8.04□□□□□ -1.12
CNOT3-204ENST00000447684 HSPG2P98160 4391 aa7.98□□□□□ -1.13
CNOT3-204ENST00000447684 XP32Q5T750 250 aa7.97□□□□□ -1.13
CNOT3-204ENST00000447684 MYCBP2O75592 4640 aa7.97□□□□□ -1.13
CNOT3-204ENST00000447684 FAT3Q8TDW7 4589 aa7.95□□□□□ -1.14
CNOT3-204ENST00000447684 A0A0A0MQY5 61 aa7.91□□□□□ -1.14
CNOT3-204ENST00000447684 LRP1Q07954 4544 aaKnown RBP7.89□□□□□ -1.15
CNOT3-204ENST00000447684 A0A1B0GVY2 172 aa7.83□□□□□ -1.16
CNOT3-204ENST00000447684 TNXBP22105 4242 aa7.82□□□□□ -1.16
CNOT3-204ENST00000447684 M0QZ58 72 aa7.82□□□□□ -1.16
CNOT3-204ENST00000447684 LUZP6Q538Z0 58 aa7.8□□□□□ -1.16
CNOT3-204ENST00000447684 PLAC4Q8WY50 150 aa7.78□□□□□ -1.16
CNOT3-204ENST00000447684 LPAP08519 4548 aa7.7□□□□□ -1.18
CNOT3-204ENST00000447684 R4GN34 69 aa7.68□□□□□ -1.18
CNOT3-204ENST00000447684 KMT2CQ8NEZ4 4911 aaKnown RBP7.57□□□□□ -1.2
CNOT3-204ENST00000447684 LRP2P98164 4655 aa7.54□□□□□ -1.2
CNOT3-204ENST00000447684 RYR2Q92736 4967 aa7.54□□□□□ -1.2
CNOT3-204ENST00000447684 Q5VSD8 79 aa7.53□□□□□ -1.2
CNOT3-204ENST00000447684 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
CNOT3-204ENST00000447684 CAMK2N1Q7Z7J9 78 aa7.41□□□□□ -1.22
CNOT3-204ENST00000447684 MT1HL1P0DM35 61 aa7.39□□□□□ -1.23
CNOT3-204ENST00000447684 RYR1P21817 5038 aa7.34□□□□□ -1.23
CNOT3-204ENST00000447684 PP632Q6XCG6 107 aa7.34□□□□□ -1.23
CNOT3-204ENST00000447684 KRTAP17-1Q9BYP8 105 aa7.3□□□□□ -1.24
CNOT3-204ENST00000447684 RYR3Q15413 4870 aa7.21□□□□□ -1.26
CNOT3-204ENST00000447684 KIAA1109Q2LD37 5005 aa7.15□□□□□ -1.27
CNOT3-204ENST00000447684 MUC17Q685J3 4493 aa7.13□□□□□ -1.27
CNOT3-204ENST00000447684 ABCA13Q86UQ4 5058 aa7.1□□□□□ -1.27
CNOT3-204ENST00000447684 TNP1P09430 55 aa7.08□□□□□ -1.28
CNOT3-204ENST00000447684 SEC61BP60468 96 aaKnown RBP7.06□□□□□ -1.28
CNOT3-204ENST00000447684 KRTAP4-1Q9BYQ7 146 aa7□□□□□ -1.29
CNOT3-204ENST00000447684 SPRR5A0A1B0GTR4 108 aa6.96□□□□□ -1.3
CNOT3-204ENST00000447684 EPPK1P58107 5090 aaKnown RBP6.95□□□□□ -1.3
CNOT3-204ENST00000447684 KRTAP19-2Q3LHN2 52 aa6.94□□□□□ -1.3
CNOT3-204ENST00000447684 KRTAP23-1A1A580 65 aa6.9□□□□□ -1.3
CNOT3-204ENST00000447684 MUC2Q02817 5179 aa6.86□□□□□ -1.31
CNOT3-204ENST00000447684 BIRC6Q9NR09 4857 aa6.79□□□□□ -1.32
CNOT3-204ENST00000447684 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
CNOT3-204ENST00000447684 PRO2289Q9P1D8 64 aa6.77□□□□□ -1.33
CNOT3-204ENST00000447684 HERC1Q15751 4861 aa6.73□□□□□ -1.33
CNOT3-204ENST00000447684 FLGP20930 4061 aaPredicted RBP6.72□□□□□ -1.33
CNOT3-204ENST00000447684 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
CNOT3-204ENST00000447684 J3QL48 77 aa6.65□□□□□ -1.34
CNOT3-204ENST00000447684 HERC2O95714 4834 aa6.63□□□□□ -1.35
CNOT3-204ENST00000447684 PCLOQ9Y6V0 5065 aa6.61□□□□□ -1.35
CNOT3-204ENST00000447684 INE1O15225 51 aa6.57□□□□□ -1.36
CNOT3-204ENST00000447684 SPRR2GQ9BYE4 73 aa6.51□□□□□ -1.37
CNOT3-204ENST00000447684 FAT4Q6V0I7 4981 aa6.48□□□□□ -1.37
CNOT3-204ENST00000447684 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
CNOT3-204ENST00000447684 M0R2T5 61 aa6.4□□□□□ -1.38
CNOT3-204ENST00000447684 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
CNOT3-204ENST00000447684 LCE2CQ5TA81 110 aa6.35□□□□□ -1.39
CNOT3-204ENST00000447684 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
CNOT3-204ENST00000447684 KRTAP10-10P60014 251 aa6.27□□□□□ -1.41
CNOT3-204ENST00000447684 HMCN2Q8NDA2 5059 aa6.24□□□□□ -1.41
CNOT3-204ENST00000447684 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
CNOT3-204ENST00000447684 MT1FP04733 61 aa6.18□□□□□ -1.42
CNOT3-204ENST00000447684 UBR4Q5T4S7 5183 aa6.17□□□□□ -1.42
CNOT3-204ENST00000447684 MT2AP02795 61 aa6.16□□□□□ -1.42
CNOT3-204ENST00000447684 MT1HP80294 61 aa6.15□□□□□ -1.43
CNOT3-204ENST00000447684 KRTAP19-8Q3LI54 63 aa6.15□□□□□ -1.43
CNOT3-204ENST00000447684 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
CNOT3-204ENST00000447684 MT1XP80297 61 aa6.11□□□□□ -1.43
CNOT3-204ENST00000447684 RNF213Q63HN8 5207 aa6.09□□□□□ -1.43
CNOT3-204ENST00000447684 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
CNOT3-204ENST00000447684 KRTAP10-7P60409 375 aaPredicted RBP6.06□□□□□ -1.44
CNOT3-204ENST00000447684 MT1BP07438 61 aa6.06□□□□□ -1.44
CNOT3-204ENST00000447684 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
CNOT3-204ENST00000447684 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
CNOT3-204ENST00000447684 KMT2DO14686 5537 aa5.86□□□□□ -1.47
CNOT3-204ENST00000447684 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
CNOT3-204ENST00000447684 KRTAP9-3Q9BYQ3 159 aa5.79□□□□□ -1.48
CNOT3-204ENST00000447684 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
CNOT3-204ENST00000447684 USH2AO75445 5202 aa5.67□□□□□ -1.5
CNOT3-204ENST00000447684 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
CNOT3-204ENST00000447684 KRTAP4-8A0A0G2JLE6 195 aa5.64□□□□□ -1.51
CNOT3-204ENST00000447684 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
CNOT3-204ENST00000447684 KRTAP2-3P0C7H8 128 aa5.64□□□□□ -1.51
CNOT3-204ENST00000447684 KRTAP2-4Q9BYR9 128 aa5.64□□□□□ -1.51
CNOT3-204ENST00000447684 KRTAP2-1Q9BYU5 128 aa5.64□□□□□ -1.51
CNOT3-204ENST00000447684 LCE2BO14633 110 aa5.5□□□□□ -1.53
CNOT3-204ENST00000447684 KRTAP9-2Q9BYQ4 174 aa5.45□□□□□ -1.54
CNOT3-204ENST00000447684 KRTAP19-7Q3SYF9 63 aa5.44□□□□□ -1.54
CNOT3-204ENST00000447684 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
CNOT3-204ENST00000447684 MT1LQ93083 61 aa5.31□□□□□ -1.56
CNOT3-204ENST00000447684 LCE2AQ5TA79 106 aaPredicted RBP5.3□□□□□ -1.56
CNOT3-204ENST00000447684 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
CNOT3-204ENST00000447684 MT1EP04732 61 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms