RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 J3QL48 77 aa10.03□□□□□ -0.8
FAM3A-215ENST00000447601 ABCA13Q86UQ4 5058 aa9.99□□□□□ -0.81
FAM3A-215ENST00000447601 UQCR11O14957 56 aa9.98□□□□□ -0.81
FAM3A-215ENST00000447601 SPATA8Q6RVD6 105 aa9.91□□□□□ -0.82
FAM3A-215ENST00000447601 MIR22HGQ0VDD5 57 aa9.89□□□□□ -0.83
FAM3A-215ENST00000447601 S4R3F8 94 aa9.88□□□□□ -0.83
FAM3A-215ENST00000447601 LRP2P98164 4655 aa9.87□□□□□ -0.83
FAM3A-215ENST00000447601 PMAIP1Q13794 54 aa9.86□□□□□ -0.83
FAM3A-215ENST00000447601 H1FX-AS1Q4G0G2 97 aa9.85□□□□□ -0.83
FAM3A-215ENST00000447601 SEC61BP60468 96 aaKnown RBP9.84□□□□□ -0.83
FAM3A-215ENST00000447601 KRTAP3-3Q9BYR6 98 aa9.84□□□□□ -0.83
FAM3A-215ENST00000447601 RBM12B-AS1Q9P1G2 102 aa9.84□□□□□ -0.83
FAM3A-215ENST00000447601 LPAP08519 4548 aa9.83□□□□□ -0.84
FAM3A-215ENST00000447601 A0A1B0GU33 70 aa9.77□□□□□ -0.84
FAM3A-215ENST00000447601 PCLOQ9Y6V0 5065 aa9.77□□□□□ -0.85
FAM3A-215ENST00000447601 A6NN06 94 aa9.74□□□□□ -0.85
FAM3A-215ENST00000447601 H0YAA0 97 aa9.68□□□□□ -0.86
FAM3A-215ENST00000447601 KRTAP10-6P60371 365 aaPredicted RBP9.62□□□□□ -0.87
FAM3A-215ENST00000447601 CSAG1Q6PB30 78 aa9.61□□□□□ -0.87
FAM3A-215ENST00000447601 KRTAP3-2Q9BYR7 98 aa9.6□□□□□ -0.87
FAM3A-215ENST00000447601 KTN1-AS1Q86SY8 53 aa9.58□□□□□ -0.88
FAM3A-215ENST00000447601 KRTAP4-1Q9BYQ7 146 aa9.57□□□□□ -0.88
FAM3A-215ENST00000447601 MUC17Q685J3 4493 aa9.5□□□□□ -0.89
FAM3A-215ENST00000447601 ADM2Q7Z4H4 148 aa9.49□□□□□ -0.89
FAM3A-215ENST00000447601 P0C880 135 aa9.49□□□□□ -0.89
FAM3A-215ENST00000447601 KRTAP13-4Q3LI77 160 aa9.42□□□□□ -0.9
FAM3A-215ENST00000447601 K7ERS5 55 aa9.4□□□□□ -0.91
FAM3A-215ENST00000447601 KRTAP19-2Q3LHN2 52 aa9.38□□□□□ -0.91
FAM3A-215ENST00000447601 HMCN2Q8NDA2 5059 aa9.37□□□□□ -0.91
FAM3A-215ENST00000447601 HERC1Q15751 4861 aa9.35□□□□□ -0.91
FAM3A-215ENST00000447601 A0A0D9SG42 100 aa9.31□□□□□ -0.92
FAM3A-215ENST00000447601 M0QZ58 72 aa9.29□□□□□ -0.92
FAM3A-215ENST00000447601 PRAC1Q96KF2 57 aa9.19□□□□□ -0.94
FAM3A-215ENST00000447601 MUC2Q02817 5179 aa9.17□□□□□ -0.94
FAM3A-215ENST00000447601 R4GN34 69 aa9.14□□□□□ -0.95
FAM3A-215ENST00000447601 KRTAP12-1P59990 96 aa9.09□□□□□ -0.95
FAM3A-215ENST00000447601 KRTAP12-2P59991 146 aa9.09□□□□□ -0.95
FAM3A-215ENST00000447601 FLGP20930 4061 aaPredicted RBP9.08□□□□□ -0.96
FAM3A-215ENST00000447601 SPINT4Q6UDR6 99 aa9.06□□□□□ -0.96
FAM3A-215ENST00000447601 ROMO1P60602 79 aa9.05□□□□□ -0.96
FAM3A-215ENST00000447601 LORP23490 312 aaPredicted RBP9.02□□□□□ -0.97
FAM3A-215ENST00000447601 LINC01554Q52M75 96 aa9□□□□□ -0.97
FAM3A-215ENST00000447601 LCE2CQ5TA81 110 aa9□□□□□ -0.97
FAM3A-215ENST00000447601 UBR4Q5T4S7 5183 aa8.91□□□□□ -0.98
FAM3A-215ENST00000447601 RNF213Q63HN8 5207 aa8.89□□□□□ -0.99
FAM3A-215ENST00000447601 KRTAP25-1Q3LHN0 102 aa8.89□□□□□ -0.99
FAM3A-215ENST00000447601 CRIPTQ9P021 101 aa8.89□□□□□ -0.99
FAM3A-215ENST00000447601 MT1HP80294 61 aa8.81□□□□□ -1
FAM3A-215ENST00000447601 M0R2T5 61 aa8.8□□□□□ -1
FAM3A-215ENST00000447601 FAT4Q6V0I7 4981 aa8.78□□□□□ -1
FAM3A-215ENST00000447601 CAMK2N1Q7Z7J9 78 aa8.62□□□□□ -1.03
FAM3A-215ENST00000447601 SPRR2GQ9BYE4 73 aa8.59□□□□□ -1.03
FAM3A-215ENST00000447601 C10orf95Q9H7T3 257 aa8.59□□□□□ -1.03
FAM3A-215ENST00000447601 MT2AP02795 61 aa8.56□□□□□ -1.04
FAM3A-215ENST00000447601 KRTAP9-8Q9BYQ0 159 aa8.53□□□□□ -1.04
FAM3A-215ENST00000447601 KRTAP10-10P60014 251 aa8.52□□□□□ -1.04
FAM3A-215ENST00000447601 MT1FP04733 61 aa8.52□□□□□ -1.05
FAM3A-215ENST00000447601 KRTAP19-1Q8IUB9 90 aa8.52□□□□□ -1.05
FAM3A-215ENST00000447601 PLAC4Q8WY50 150 aa8.43□□□□□ -1.06
FAM3A-215ENST00000447601 KRTAP19-8Q3LI54 63 aa8.29□□□□□ -1.08
FAM3A-215ENST00000447601 TNP1P09430 55 aa8.26□□□□□ -1.09
FAM3A-215ENST00000447601 PP632Q6XCG6 107 aa8.24□□□□□ -1.09
FAM3A-215ENST00000447601 KRTAP9-3Q9BYQ3 159 aa8.2□□□□□ -1.1
FAM3A-215ENST00000447601 LCE2AQ5TA79 106 aaPredicted RBP8.15□□□□□ -1.1
FAM3A-215ENST00000447601 MT1BP07438 61 aa8.15□□□□□ -1.11
FAM3A-215ENST00000447601 KRTAP23-1A1A580 65 aa8.11□□□□□ -1.11
FAM3A-215ENST00000447601 KRTAP10-5P60370 271 aa7.98□□□□□ -1.13
FAM3A-215ENST00000447601 MT1XP80297 61 aa7.98□□□□□ -1.13
FAM3A-215ENST00000447601 KRTAP15-1Q3LI76 137 aa7.96□□□□□ -1.14
FAM3A-215ENST00000447601 LCE2BO14633 110 aa7.91□□□□□ -1.14
FAM3A-215ENST00000447601 PRO2289Q9P1D8 64 aa7.88□□□□□ -1.15
FAM3A-215ENST00000447601 LCE3AQ5TA76 89 aa7.82□□□□□ -1.16
FAM3A-215ENST00000447601 KRTAP10-12P60413 245 aa7.73□□□□□ -1.17
FAM3A-215ENST00000447601 KRTAP10-7P60409 375 aaPredicted RBP7.68□□□□□ -1.18
FAM3A-215ENST00000447601 KRTAP8-1Q8IUC2 63 aa7.68□□□□□ -1.18
FAM3A-215ENST00000447601 KRTAP9-2Q9BYQ4 174 aa7.63□□□□□ -1.19
FAM3A-215ENST00000447601 LCE2DQ5TA82 110 aaPredicted RBP7.62□□□□□ -1.19
FAM3A-215ENST00000447601 USH2AO75445 5202 aa7.6□□□□□ -1.19
FAM3A-215ENST00000447601 NDUFAF8A1L188 74 aa7.55□□□□□ -1.2
FAM3A-215ENST00000447601 H3BS24 57 aa7.51□□□□□ -1.21
FAM3A-215ENST00000447601 KRTAP12-3P60328 96 aa7.5□□□□□ -1.21
FAM3A-215ENST00000447601 SPRR5A0A1B0GTR4 108 aa7.45□□□□□ -1.22
FAM3A-215ENST00000447601 LUZP6Q538Z0 58 aa7.44□□□□□ -1.22
FAM3A-215ENST00000447601 KRTAP19-6Q3LI70 58 aa7.33□□□□□ -1.24
FAM3A-215ENST00000447601 SSPOA2VEC9 5147 aa7.32□□□□□ -1.24
FAM3A-215ENST00000447601 KRTAP19-5Q3LI72 72 aa7.31□□□□□ -1.24
FAM3A-215ENST00000447601 FSIP2Q5CZC0 6907 aa7.3□□□□□ -1.24
FAM3A-215ENST00000447601 CRCT1Q9UGL9 99 aa7.28□□□□□ -1.24
FAM3A-215ENST00000447601 KRTAP4-8A0A0G2JLE6 195 aa7.27□□□□□ -1.25
FAM3A-215ENST00000447601 KRTAP4-8Q9BYQ9 185 aa7.27□□□□□ -1.25
FAM3A-215ENST00000447601 KRTAP9-6A0A140TA67 174 aa7.26□□□□□ -1.25
FAM3A-215ENST00000447601 KMT2DO14686 5537 aa7.2□□□□□ -1.26
FAM3A-215ENST00000447601 KRTAP19-7Q3SYF9 63 aa7.11□□□□□ -1.27
FAM3A-215ENST00000447601 LCE3CQ5T5A8 94 aa7.04□□□□□ -1.28
FAM3A-215ENST00000447601 MT1EP04732 61 aa6.97□□□□□ -1.29
FAM3A-215ENST00000447601 KRTAP19-4Q3LI73 84 aa6.96□□□□□ -1.3
FAM3A-215ENST00000447601 FCGBPQ9Y6R7 5405 aaPredicted RBP6.92□□□□□ -1.3
FAM3A-215ENST00000447601 MT1LQ93083 61 aa6.89□□□□□ -1.31
FAM3A-215ENST00000447601 A0A0A0MQY5 61 aa6.76□□□□□ -1.33
FAM3A-215ENST00000447601 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 262.6 ms