RNA–Protein interactions for RNA: ENST00000446276.5

MACF1-208, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-208ENST00000446276 C9orf92A6NGG3 77 aa6.47□□□□□ -1.37
MACF1-208ENST00000446276 NOTCH2NLQ7Z3S9 236 aa6.46□□□□□ -1.38
MACF1-208ENST00000446276 C8orf17Q9NRJ1 99 aa6.45□□□□□ -1.38
MACF1-208ENST00000446276 LRP2P98164 4655 aa6.43□□□□□ -1.38
MACF1-208ENST00000446276 XP32Q5T750 250 aa6.43□□□□□ -1.38
MACF1-208ENST00000446276 MMP24-AS1A0A0U1RRL7 71 aa6.42□□□□□ -1.38
MACF1-208ENST00000446276 KRTAP16-1A8MUX0 517 aa6.42□□□□□ -1.38
MACF1-208ENST00000446276 ROMO1P60602 79 aa6.39□□□□□ -1.39
MACF1-208ENST00000446276 C20orf166-AS1Q96NR2 134 aa6.38□□□□□ -1.39
MACF1-208ENST00000446276 A8MUU9 505 aa6.37□□□□□ -1.39
MACF1-208ENST00000446276 SPATA8Q6RVD6 105 aa6.36□□□□□ -1.39
MACF1-208ENST00000446276 MRPL34Q9BQ48 92 aaKnown RBP6.36□□□□□ -1.39
MACF1-208ENST00000446276 RPL37P61927 97 aaKnown RBP6.35□□□□□ -1.39
MACF1-208ENST00000446276 A0A0A0MQY5 61 aa6.34□□□□□ -1.39
MACF1-208ENST00000446276 MIR22HGQ0VDD5 57 aa6.31□□□□□ -1.4
MACF1-208ENST00000446276 MUC17Q685J3 4493 aa6.31□□□□□ -1.4
MACF1-208ENST00000446276 SEC61BP60468 96 aaKnown RBP6.29□□□□□ -1.4
MACF1-208ENST00000446276 UBR4Q5T4S7 5183 aa6.29□□□□□ -1.4
MACF1-208ENST00000446276 P0C880 135 aa6.29□□□□□ -1.4
MACF1-208ENST00000446276 A0A1B0GU69 56 aa6.28□□□□□ -1.4
MACF1-208ENST00000446276 TP53AIP1Q9HCN2 124 aa6.24□□□□□ -1.41
MACF1-208ENST00000446276 UQCR11O14957 56 aa6.24□□□□□ -1.41
MACF1-208ENST00000446276 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
MACF1-208ENST00000446276 Q5W150 140 aa6.21□□□□□ -1.42
MACF1-208ENST00000446276 RNF213Q63HN8 5207 aa6.19□□□□□ -1.42
MACF1-208ENST00000446276 ACYP2P14621 99 aa6.17□□□□□ -1.42
MACF1-208ENST00000446276 MUC2Q02817 5179 aa6.17□□□□□ -1.42
MACF1-208ENST00000446276 KRTAP4-1Q9BYQ7 146 aa6.16□□□□□ -1.42
MACF1-208ENST00000446276 DMAC1Q96GE9 116 aa6.12□□□□□ -1.43
MACF1-208ENST00000446276 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
MACF1-208ENST00000446276 IGKV2-30P06310 120 aa6.09□□□□□ -1.43
MACF1-208ENST00000446276 IGKV2D-30A0A075B6S6 120 aa6.09□□□□□ -1.44
MACF1-208ENST00000446276 NDUFAF8A1L188 74 aa6.05□□□□□ -1.44
MACF1-208ENST00000446276 KRTAP19-2Q3LHN2 52 aa5.98□□□□□ -1.45
MACF1-208ENST00000446276 H0YAA0 97 aa5.96□□□□□ -1.46
MACF1-208ENST00000446276 FAT4Q6V0I7 4981 aa5.95□□□□□ -1.46
MACF1-208ENST00000446276 SPINT4Q6UDR6 99 aa5.94□□□□□ -1.46
MACF1-208ENST00000446276 LCE2CQ5TA81 110 aa5.93□□□□□ -1.46
MACF1-208ENST00000446276 COX6B2Q6YFQ2 88 aa5.93□□□□□ -1.46
MACF1-208ENST00000446276 FLGP20930 4061 aaPredicted RBP5.91□□□□□ -1.46
MACF1-208ENST00000446276 KRTAP3-1Q9BYR8 98 aa5.89□□□□□ -1.47
MACF1-208ENST00000446276 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
MACF1-208ENST00000446276 H1FX-AS1Q4G0G2 97 aa5.85□□□□□ -1.47
MACF1-208ENST00000446276 LCE2BO14633 110 aa5.83□□□□□ -1.48
MACF1-208ENST00000446276 MT1HP80294 61 aa5.82□□□□□ -1.48
MACF1-208ENST00000446276 LCE2AQ5TA79 106 aaPredicted RBP5.79□□□□□ -1.48
MACF1-208ENST00000446276 LUZP6Q538Z0 58 aa5.78□□□□□ -1.48
MACF1-208ENST00000446276 A0A1B0GU33 70 aa5.76□□□□□ -1.49
MACF1-208ENST00000446276 S4R3F8 94 aa5.74□□□□□ -1.49
MACF1-208ENST00000446276 M0R2T5 61 aa5.73□□□□□ -1.49
MACF1-208ENST00000446276 C10orf95Q9H7T3 257 aa5.73□□□□□ -1.49
MACF1-208ENST00000446276 K7ERS5 55 aa5.69□□□□□ -1.5
MACF1-208ENST00000446276 KRTAP10-6P60371 365 aaPredicted RBP5.64□□□□□ -1.51
MACF1-208ENST00000446276 LORP23490 312 aaPredicted RBP5.63□□□□□ -1.51
MACF1-208ENST00000446276 KRTAP9-8Q9BYQ0 159 aa5.58□□□□□ -1.52
MACF1-208ENST00000446276 MT2AP02795 61 aa5.53□□□□□ -1.52
MACF1-208ENST00000446276 A0A0D9SG42 100 aa5.5□□□□□ -1.53
MACF1-208ENST00000446276 MT1FP04733 61 aa5.49□□□□□ -1.53
MACF1-208ENST00000446276 KRTAP10-10P60014 251 aa5.47□□□□□ -1.53
MACF1-208ENST00000446276 KRTAP13-4Q3LI77 160 aa5.44□□□□□ -1.54
MACF1-208ENST00000446276 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
MACF1-208ENST00000446276 KRTAP9-3Q9BYQ3 159 aa5.39□□□□□ -1.55
MACF1-208ENST00000446276 KRTAP19-1Q8IUB9 90 aa5.32□□□□□ -1.56
MACF1-208ENST00000446276 KRTAP12-2P59991 146 aa5.31□□□□□ -1.56
MACF1-208ENST00000446276 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
MACF1-208ENST00000446276 KRTAP9-2Q9BYQ4 174 aa5.31□□□□□ -1.56
MACF1-208ENST00000446276 R4GN34 69 aa5.29□□□□□ -1.56
MACF1-208ENST00000446276 M0QZ58 72 aa5.26□□□□□ -1.57
MACF1-208ENST00000446276 PLAC4Q8WY50 150 aa5.25□□□□□ -1.57
MACF1-208ENST00000446276 USH2AO75445 5202 aa5.23□□□□□ -1.57
MACF1-208ENST00000446276 KRTAP19-8Q3LI54 63 aa5.21□□□□□ -1.57
MACF1-208ENST00000446276 FSIP2Q5CZC0 6907 aa5.19□□□□□ -1.58
MACF1-208ENST00000446276 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
MACF1-208ENST00000446276 MT1BP07438 61 aa5.15□□□□□ -1.58
MACF1-208ENST00000446276 KRTAP9-6A0A140TA67 174 aa5.12□□□□□ -1.59
MACF1-208ENST00000446276 SSPOA2VEC9 5147 aa5.09□□□□□ -1.59
MACF1-208ENST00000446276 CAMK2N1Q7Z7J9 78 aa5.05□□□□□ -1.6
MACF1-208ENST00000446276 CRCT1Q9UGL9 99 aa5.03□□□□□ -1.6
MACF1-208ENST00000446276 KRTAP19-6Q3LI70 58 aa5.03□□□□□ -1.6
MACF1-208ENST00000446276 KRTAP10-5P60370 271 aa4.95□□□□□ -1.62
MACF1-208ENST00000446276 PRO2289Q9P1D8 64 aa4.94□□□□□ -1.62
MACF1-208ENST00000446276 MT1XP80297 61 aa4.93□□□□□ -1.62
MACF1-208ENST00000446276 FCGBPQ9Y6R7 5405 aaPredicted RBP4.93□□□□□ -1.62
MACF1-208ENST00000446276 SPRR5A0A1B0GTR4 108 aa4.74□□□□□ -1.65
MACF1-208ENST00000446276 PP632Q6XCG6 107 aa4.73□□□□□ -1.65
MACF1-208ENST00000446276 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.66
MACF1-208ENST00000446276 MACF1Q9UPN3 7388 aaKnown RBP4.69□□□□□ -1.66
MACF1-208ENST00000446276 KRTAP10-12P60413 245 aa4.69□□□□□ -1.66
MACF1-208ENST00000446276 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
MACF1-208ENST00000446276 INE1O15225 51 aa4.66□□□□□ -1.66
MACF1-208ENST00000446276 TNP1P09430 55 aa4.65□□□□□ -1.67
MACF1-208ENST00000446276 KMT2DO14686 5537 aa4.64□□□□□ -1.67
MACF1-208ENST00000446276 SYNE2Q8WXH0 6885 aaKnown RBP4.62□□□□□ -1.67
MACF1-208ENST00000446276 KRTAP9-7A8MTY7 169 aa4.61□□□□□ -1.67
MACF1-208ENST00000446276 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.67
MACF1-208ENST00000446276 KRTAP4-8Q9BYQ9 185 aa4.59□□□□□ -1.67
MACF1-208ENST00000446276 KRTAP8-1Q8IUC2 63 aa4.53□□□□□ -1.68
MACF1-208ENST00000446276 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
MACF1-208ENST00000446276 LCE3AQ5TA76 89 aa4.49□□□□□ -1.69
MACF1-208ENST00000446276 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms