RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 KMT2AQ03164 3969 aa3.92□□□□□ -1.78
SMG1-202ENST00000446231 FLGP20930 4061 aaPredicted RBP3.89□□□□□ -1.79
SMG1-202ENST00000446231 KRTAP3-2Q9BYR7 98 aa3.88□□□□□ -1.79
SMG1-202ENST00000446231 PKHD1P08F94 4074 aa3.87□□□□□ -1.79
SMG1-202ENST00000446231 CUBNO60494 3623 aa3.87□□□□□ -1.79
SMG1-202ENST00000446231 VPS13BQ7Z7G8 4022 aa3.86□□□□□ -1.79
SMG1-202ENST00000446231 DNAH17Q9UFH2 4485 aa3.86□□□□□ -1.79
SMG1-202ENST00000446231 DYNC2H1Q8NCM8 4307 aaKnown RBP3.85□□□□□ -1.79
SMG1-202ENST00000446231 DNAH8Q96JB1 4490 aa3.81□□□□□ -1.8
SMG1-202ENST00000446231 DYNC1H1Q14204 4646 aaKnown RBP3.79□□□□□ -1.8
SMG1-202ENST00000446231 DNAH9Q9NYC9 4486 aa3.76□□□□□ -1.81
SMG1-202ENST00000446231 KRTAP3-3Q9BYR6 98 aa3.74□□□□□ -1.81
SMG1-202ENST00000446231 INE1O15225 51 aa3.72□□□□□ -1.81
SMG1-202ENST00000446231 APOBP04114 4563 aaKnown RBP3.71□□□□□ -1.82
SMG1-202ENST00000446231 DNAH5Q8TE73 4624 aa3.68□□□□□ -1.82
SMG1-202ENST00000446231 A0A1B0GVY2 172 aa3.66□□□□□ -1.82
SMG1-202ENST00000446231 PRO2289Q9P1D8 64 aa3.66□□□□□ -1.82
SMG1-202ENST00000446231 MUC3AQ02505 3323 aa3.63□□□□□ -1.83
SMG1-202ENST00000446231 FAT1Q14517 4588 aa3.62□□□□□ -1.83
SMG1-202ENST00000446231 LRP1Q07954 4544 aaKnown RBP3.62□□□□□ -1.83
SMG1-202ENST00000446231 PKD1P98161 4303 aa3.59□□□□□ -1.84
SMG1-202ENST00000446231 KRTAP23-1A1A580 65 aa3.58□□□□□ -1.84
SMG1-202ENST00000446231 FAT2Q9NYQ8 4349 aa3.57□□□□□ -1.84
SMG1-202ENST00000446231 PKHD1L1Q86WI1 4243 aa3.57□□□□□ -1.84
SMG1-202ENST00000446231 SACSQ9NZJ4 4579 aa3.56□□□□□ -1.84
SMG1-202ENST00000446231 KRTAP10-10P60014 251 aa3.56□□□□□ -1.84
SMG1-202ENST00000446231 RYR1P21817 5038 aa3.54□□□□□ -1.84
SMG1-202ENST00000446231 MYCBP2O75592 4640 aa3.54□□□□□ -1.84
SMG1-202ENST00000446231 HYDINQ4G0P3 5121 aa3.5□□□□□ -1.85
SMG1-202ENST00000446231 TNXBP22105 4242 aa3.5□□□□□ -1.85
SMG1-202ENST00000446231 FAT3Q8TDW7 4589 aa3.48□□□□□ -1.85
SMG1-202ENST00000446231 LRP1BQ9NZR2 4599 aa3.46□□□□□ -1.86
SMG1-202ENST00000446231 HSPG2P98160 4391 aa3.44□□□□□ -1.86
SMG1-202ENST00000446231 CSMD2Q7Z408 3487 aa3.44□□□□□ -1.86
SMG1-202ENST00000446231 KRTAP10-4P60372 401 aaPredicted RBP3.41□□□□□ -1.86
SMG1-202ENST00000446231 RYR3Q15413 4870 aa3.37□□□□□ -1.87
SMG1-202ENST00000446231 KRTAP21-3Q3LHN1 58 aa3.36□□□□□ -1.87
SMG1-202ENST00000446231 MT1HL1P0DM35 61 aa3.36□□□□□ -1.87
SMG1-202ENST00000446231 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
SMG1-202ENST00000446231 LORP23490 312 aaPredicted RBP3.35□□□□□ -1.87
SMG1-202ENST00000446231 STARD9Q9P2P6 4700 aa3.31□□□□□ -1.88
SMG1-202ENST00000446231 DNHD1Q96M86 4753 aa3.3□□□□□ -1.88
SMG1-202ENST00000446231 KRTAP10-12P60413 245 aa3.3□□□□□ -1.88
SMG1-202ENST00000446231 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
SMG1-202ENST00000446231 PCLOQ9Y6V0 5065 aa3.25□□□□□ -1.89
SMG1-202ENST00000446231 RYR2Q92736 4967 aa3.21□□□□□ -1.9
SMG1-202ENST00000446231 BIRC6Q9NR09 4857 aa3.15□□□□□ -1.9
SMG1-202ENST00000446231 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
SMG1-202ENST00000446231 RNF213Q63HN8 5207 aa3.13□□□□□ -1.91
SMG1-202ENST00000446231 MUC17Q685J3 4493 aa3.13□□□□□ -1.91
SMG1-202ENST00000446231 KMT2CQ8NEZ4 4911 aaKnown RBP3.13□□□□□ -1.91
SMG1-202ENST00000446231 KRTAP4-1Q9BYQ7 146 aa3.08□□□□□ -1.92
SMG1-202ENST00000446231 LRP2P98164 4655 aa3.06□□□□□ -1.92
SMG1-202ENST00000446231 KRTAP4-5Q9BYR2 181 aa3.05□□□□□ -1.92
SMG1-202ENST00000446231 KRTAP10-5P60370 271 aa3.04□□□□□ -1.92
SMG1-202ENST00000446231 KRTAP8-1Q8IUC2 63 aa3.04□□□□□ -1.92
SMG1-202ENST00000446231 LCE3CQ5T5A8 94 aa3.03□□□□□ -1.92
SMG1-202ENST00000446231 SPRR2GQ9BYE4 73 aa3.03□□□□□ -1.92
SMG1-202ENST00000446231 EPPK1P58107 5090 aaKnown RBP3.03□□□□□ -1.93
SMG1-202ENST00000446231 KRTAP19-5Q3LI72 72 aa3.01□□□□□ -1.93
SMG1-202ENST00000446231 CRCT1Q9UGL9 99 aa2.99□□□□□ -1.93
SMG1-202ENST00000446231 UBR4Q5T4S7 5183 aa2.97□□□□□ -1.93
SMG1-202ENST00000446231 ABCA13Q86UQ4 5058 aa2.97□□□□□ -1.93
SMG1-202ENST00000446231 HMCN2Q8NDA2 5059 aa2.97□□□□□ -1.93
SMG1-202ENST00000446231 HERC2O95714 4834 aa2.95□□□□□ -1.94
SMG1-202ENST00000446231 KIAA1109Q2LD37 5005 aa2.94□□□□□ -1.94
SMG1-202ENST00000446231 HERC1Q15751 4861 aa2.93□□□□□ -1.94
SMG1-202ENST00000446231 MT2AP02795 61 aa2.9□□□□□ -1.94
SMG1-202ENST00000446231 MT1FP04733 61 aa2.88□□□□□ -1.95
SMG1-202ENST00000446231 KRTAP19-4Q3LI73 84 aa2.85□□□□□ -1.95
SMG1-202ENST00000446231 MT1XP80297 61 aa2.85□□□□□ -1.95
SMG1-202ENST00000446231 KRTAP19-1Q8IUB9 90 aa2.85□□□□□ -1.95
SMG1-202ENST00000446231 KRTAP10-7P60409 375 aaPredicted RBP2.84□□□□□ -1.95
SMG1-202ENST00000446231 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
SMG1-202ENST00000446231 MUC12Q9UKN1 5478 aa2.82□□□□□ -1.96
SMG1-202ENST00000446231 MT1HP80294 61 aa2.82□□□□□ -1.96
SMG1-202ENST00000446231 KRTAP19-8Q3LI54 63 aa2.79□□□□□ -1.96
SMG1-202ENST00000446231 KRTAP17-1Q9BYP8 105 aa2.75□□□□□ -1.97
SMG1-202ENST00000446231 LPAP08519 4548 aa2.69□□□□□ -1.98
SMG1-202ENST00000446231 MDN1Q9NU22 5596 aa2.68□□□□□ -1.98
SMG1-202ENST00000446231 FAT4Q6V0I7 4981 aa2.68□□□□□ -1.98
SMG1-202ENST00000446231 MT1BP07438 61 aa2.67□□□□□ -1.98
SMG1-202ENST00000446231 USH2AO75445 5202 aa2.64□□□□□ -1.99
SMG1-202ENST00000446231 LCE3BQ5TA77 95 aa2.63□□□□□ -1.99
SMG1-202ENST00000446231 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
SMG1-202ENST00000446231 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
SMG1-202ENST00000446231 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
SMG1-202ENST00000446231 MT1GP13640 62 aa2.61□□□□□ -1.99
SMG1-202ENST00000446231 LCE2CQ5TA81 110 aa2.61□□□□□ -1.99
SMG1-202ENST00000446231 KRTAP19-2Q3LHN2 52 aa2.61□□□□□ -1.99
SMG1-202ENST00000446231 KRTAP9-3Q9BYQ3 159 aa2.6□□□□□ -1.99
SMG1-202ENST00000446231 KRTAP9-8Q9BYQ0 159 aa2.6□□□□□ -1.99
SMG1-202ENST00000446231 MT1LQ93083 61 aa2.59□□□□□ -2
SMG1-202ENST00000446231 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
SMG1-202ENST00000446231 KRTAP4-7Q9BYR0 210 aa2.55□□□□□ -2
SMG1-202ENST00000446231 FSIP2Q5CZC0 6907 aa2.53□□□□□ -2
SMG1-202ENST00000446231 SYNE2Q8WXH0 6885 aaKnown RBP2.52□□□□□ -2.01
SMG1-202ENST00000446231 KRTAP4-8A0A0G2JLE6 195 aa2.52□□□□□ -2.01
SMG1-202ENST00000446231 KRTAP4-8Q9BYQ9 185 aa2.52□□□□□ -2.01
SMG1-202ENST00000446231 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms