RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 NOTCH2NLQ7Z3S9 236 aa4.78□□□□□ -1.64
FXR1-203ENST00000445140 K7EQZ3 153 aa4.77□□□□□ -1.65
FXR1-203ENST00000445140 RPL37P61927 97 aaKnown RBP4.76□□□□□ -1.65
FXR1-203ENST00000445140 IGHV6-1A0A0B4J1U7 121 aa4.74□□□□□ -1.65
FXR1-203ENST00000445140 COA5Q86WW8 74 aa4.74□□□□□ -1.65
FXR1-203ENST00000445140 MRPL34Q9BQ48 92 aaKnown RBP4.73□□□□□ -1.65
FXR1-203ENST00000445140 MP68P56378 58 aa4.71□□□□□ -1.66
FXR1-203ENST00000445140 CASC2Q6XLA1 102 aa4.71□□□□□ -1.66
FXR1-203ENST00000445140 WFDC13Q8IUB5 93 aa4.71□□□□□ -1.66
FXR1-203ENST00000445140 SPANXA2-OT1Q8N9U9 137 aa4.69□□□□□ -1.66
FXR1-203ENST00000445140 TP53AIP1Q9HCN2 124 aa4.69□□□□□ -1.66
FXR1-203ENST00000445140 C9orf92A6NGG3 77 aa4.69□□□□□ -1.66
FXR1-203ENST00000445140 LINC01558Q9Y6Z2 57 aa4.69□□□□□ -1.66
FXR1-203ENST00000445140 H0Y9P7 68 aa4.67□□□□□ -1.66
FXR1-203ENST00000445140 CSAG1Q6PB30 78 aa4.66□□□□□ -1.66
FXR1-203ENST00000445140 LPAP08519 4548 aa4.64□□□□□ -1.67
FXR1-203ENST00000445140 PCOTHQ58A44 107 aa4.63□□□□□ -1.67
FXR1-203ENST00000445140 LRP2P98164 4655 aa4.62□□□□□ -1.67
FXR1-203ENST00000445140 H3BPC8 53 aa4.59□□□□□ -1.67
FXR1-203ENST00000445140 HRES1P13985 223 aa4.58□□□□□ -1.68
FXR1-203ENST00000445140 IGKV2-30P06310 120 aa4.55□□□□□ -1.68
FXR1-203ENST00000445140 Q5W150 140 aa4.55□□□□□ -1.68
FXR1-203ENST00000445140 KRTAP4-1Q9BYQ7 146 aa4.54□□□□□ -1.68
FXR1-203ENST00000445140 ROMO1P60602 79 aa4.53□□□□□ -1.68
FXR1-203ENST00000445140 RNF213Q63HN8 5207 aa4.52□□□□□ -1.69
FXR1-203ENST00000445140 KRTAP19-2Q3LHN2 52 aa4.51□□□□□ -1.69
FXR1-203ENST00000445140 UBR4Q5T4S7 5183 aa4.5□□□□□ -1.69
FXR1-203ENST00000445140 P0C880 135 aa4.49□□□□□ -1.69
FXR1-203ENST00000445140 SPATA8Q6RVD6 105 aa4.48□□□□□ -1.69
FXR1-203ENST00000445140 MIR22HGQ0VDD5 57 aa4.46□□□□□ -1.7
FXR1-203ENST00000445140 COX6B2Q6YFQ2 88 aa4.42□□□□□ -1.7
FXR1-203ENST00000445140 IGKV2D-30A0A075B6S6 120 aa4.42□□□□□ -1.7
FXR1-203ENST00000445140 A0A1B0GU69 56 aa4.42□□□□□ -1.7
FXR1-203ENST00000445140 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.7
FXR1-203ENST00000445140 FLGP20930 4061 aaPredicted RBP4.4□□□□□ -1.71
FXR1-203ENST00000445140 UQCR11O14957 56 aa4.39□□□□□ -1.71
FXR1-203ENST00000445140 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
FXR1-203ENST00000445140 CAMK2N1Q7Z7J9 78 aa4.38□□□□□ -1.71
FXR1-203ENST00000445140 H1FX-AS1Q4G0G2 97 aa4.37□□□□□ -1.71
FXR1-203ENST00000445140 CRIPTQ9P021 101 aa4.37□□□□□ -1.71
FXR1-203ENST00000445140 FAT4Q6V0I7 4981 aa4.35□□□□□ -1.71
FXR1-203ENST00000445140 DMAC1Q96GE9 116 aa4.35□□□□□ -1.71
FXR1-203ENST00000445140 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
FXR1-203ENST00000445140 MT1HP80294 61 aa4.34□□□□□ -1.72
FXR1-203ENST00000445140 ACYP2P14621 99 aa4.32□□□□□ -1.72
FXR1-203ENST00000445140 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
FXR1-203ENST00000445140 MUC2Q02817 5179 aa4.28□□□□□ -1.72
FXR1-203ENST00000445140 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
FXR1-203ENST00000445140 S4R3F8 94 aa4.26□□□□□ -1.73
FXR1-203ENST00000445140 H0YAA0 97 aa4.23□□□□□ -1.73
FXR1-203ENST00000445140 KRTAP10-6P60371 365 aaPredicted RBP4.22□□□□□ -1.73
FXR1-203ENST00000445140 SPINT4Q6UDR6 99 aa4.21□□□□□ -1.74
FXR1-203ENST00000445140 KRTAP9-6A0A140TA67 174 aa4.2□□□□□ -1.74
FXR1-203ENST00000445140 KRTAP9-8Q9BYQ0 159 aa4.17□□□□□ -1.74
FXR1-203ENST00000445140 KRTAP9-2Q9BYQ4 174 aa4.17□□□□□ -1.74
FXR1-203ENST00000445140 K7ERS5 55 aa4.16□□□□□ -1.74
FXR1-203ENST00000445140 M0R2T5 61 aa4.14□□□□□ -1.75
FXR1-203ENST00000445140 MT2AP02795 61 aa4.12□□□□□ -1.75
FXR1-203ENST00000445140 C10orf95Q9H7T3 257 aa4.09□□□□□ -1.75
FXR1-203ENST00000445140 MT1FP04733 61 aa4.07□□□□□ -1.76
FXR1-203ENST00000445140 A0A1B0GU33 70 aa4.04□□□□□ -1.76
FXR1-203ENST00000445140 KRTAP9-3Q9BYQ3 159 aa4.04□□□□□ -1.76
FXR1-203ENST00000445140 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
FXR1-203ENST00000445140 SPRR2GQ9BYE4 73 aa4.02□□□□□ -1.77
FXR1-203ENST00000445140 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
FXR1-203ENST00000445140 LCE5AQ5TCM9 118 aa4.02□□□□□ -1.77
FXR1-203ENST00000445140 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
FXR1-203ENST00000445140 KRTAP10-10P60014 251 aa4□□□□□ -1.77
FXR1-203ENST00000445140 KRTAP19-8Q3LI54 63 aa3.98□□□□□ -1.77
FXR1-203ENST00000445140 KRTAP19-1Q8IUB9 90 aa3.97□□□□□ -1.77
FXR1-203ENST00000445140 M0QZ58 72 aa3.96□□□□□ -1.78
FXR1-203ENST00000445140 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
FXR1-203ENST00000445140 CRCT1Q9UGL9 99 aa3.9□□□□□ -1.78
FXR1-203ENST00000445140 KRTAP9-7A8MTY7 169 aa3.9□□□□□ -1.79
FXR1-203ENST00000445140 A0A0D9SG42 100 aa3.89□□□□□ -1.79
FXR1-203ENST00000445140 KRTAP13-4Q3LI77 160 aa3.87□□□□□ -1.79
FXR1-203ENST00000445140 R4GN34 69 aa3.87□□□□□ -1.79
FXR1-203ENST00000445140 MT1BP07438 61 aa3.85□□□□□ -1.79
FXR1-203ENST00000445140 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
FXR1-203ENST00000445140 KRTAP19-6Q3LI70 58 aa3.81□□□□□ -1.8
FXR1-203ENST00000445140 USH2AO75445 5202 aa3.79□□□□□ -1.8
FXR1-203ENST00000445140 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
FXR1-203ENST00000445140 SSPOA2VEC9 5147 aa3.74□□□□□ -1.81
FXR1-203ENST00000445140 KRTAP10-5P60370 271 aa3.74□□□□□ -1.81
FXR1-203ENST00000445140 PLAC4Q8WY50 150 aa3.74□□□□□ -1.81
FXR1-203ENST00000445140 KRTAP12-1P59990 96 aa3.7□□□□□ -1.82
FXR1-203ENST00000445140 PRO2289Q9P1D8 64 aa3.68□□□□□ -1.82
FXR1-203ENST00000445140 MT1XP80297 61 aa3.67□□□□□ -1.82
FXR1-203ENST00000445140 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.65□□□□□ -1.82
FXR1-203ENST00000445140 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
FXR1-203ENST00000445140 KRTAP10-12P60413 245 aa3.56□□□□□ -1.84
FXR1-203ENST00000445140 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
FXR1-203ENST00000445140 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
FXR1-203ENST00000445140 KRTAP4-8Q9BYQ9 185 aa3.49□□□□□ -1.85
FXR1-203ENST00000445140 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
FXR1-203ENST00000445140 FSIP2Q5CZC0 6907 aa3.45□□□□□ -1.86
FXR1-203ENST00000445140 TNP1P09430 55 aa3.44□□□□□ -1.86
FXR1-203ENST00000445140 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
FXR1-203ENST00000445140 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
FXR1-203ENST00000445140 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms