RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 LCE2DQ5TA82 110 aaPredicted RBP7.35□□□□□ -1.23
RBM39-216ENST00000444878 LUZP6Q538Z0 58 aa7.34□□□□□ -1.23
RBM39-216ENST00000444878 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
RBM39-216ENST00000444878 MT1HL1P0DM35 61 aa7.32□□□□□ -1.24
RBM39-216ENST00000444878 SPINK7P58062 85 aa7.31□□□□□ -1.24
RBM39-216ENST00000444878 A6NED7 52 aa7.3□□□□□ -1.24
RBM39-216ENST00000444878 A8MU10 97 aa7.3□□□□□ -1.24
RBM39-216ENST00000444878 CDC42SE1Q9NRR8 79 aa7.28□□□□□ -1.24
RBM39-216ENST00000444878 RPL37P61927 97 aaKnown RBP7.24□□□□□ -1.25
RBM39-216ENST00000444878 XP32Q5T750 250 aa7.24□□□□□ -1.25
RBM39-216ENST00000444878 K7ERS5 55 aa7.21□□□□□ -1.26
RBM39-216ENST00000444878 A0A1B0GU69 56 aa7.19□□□□□ -1.26
RBM39-216ENST00000444878 KRTAP4-5Q9BYR2 181 aa7.18□□□□□ -1.26
RBM39-216ENST00000444878 KRTAP3-1Q9BYR8 98 aa7.18□□□□□ -1.26
RBM39-216ENST00000444878 ROMO1P60602 79 aa7.15□□□□□ -1.26
RBM39-216ENST00000444878 COX6B2Q6YFQ2 88 aa7.15□□□□□ -1.26
RBM39-216ENST00000444878 CAMK2N1Q7Z7J9 78 aa7.12□□□□□ -1.27
RBM39-216ENST00000444878 TPRXLQ17RH7 258 aa7.11□□□□□ -1.27
RBM39-216ENST00000444878 LRP2P98164 4655 aa7.06□□□□□ -1.28
RBM39-216ENST00000444878 ABCA13Q86UQ4 5058 aa7.04□□□□□ -1.28
RBM39-216ENST00000444878 LPAP08519 4548 aa7.02□□□□□ -1.29
RBM39-216ENST00000444878 UQCR11O14957 56 aa7.01□□□□□ -1.29
RBM39-216ENST00000444878 HERC2O95714 4834 aa6.99□□□□□ -1.29
RBM39-216ENST00000444878 MIR22HGQ0VDD5 57 aa6.96□□□□□ -1.3
RBM39-216ENST00000444878 SPATA8Q6RVD6 105 aa6.96□□□□□ -1.3
RBM39-216ENST00000444878 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
RBM39-216ENST00000444878 BIRC6Q9NR09 4857 aa6.94□□□□□ -1.3
RBM39-216ENST00000444878 S4R3F8 94 aa6.92□□□□□ -1.3
RBM39-216ENST00000444878 LCE2CQ5TA81 110 aa6.92□□□□□ -1.3
RBM39-216ENST00000444878 H1FX-AS1Q4G0G2 97 aa6.89□□□□□ -1.31
RBM39-216ENST00000444878 P0C880 135 aa6.88□□□□□ -1.31
RBM39-216ENST00000444878 A0A1B0GU33 70 aa6.87□□□□□ -1.31
RBM39-216ENST00000444878 H0YAA0 97 aa6.81□□□□□ -1.32
RBM39-216ENST00000444878 CSAG1Q6PB30 78 aa6.78□□□□□ -1.32
RBM39-216ENST00000444878 MUC17Q685J3 4493 aa6.76□□□□□ -1.33
RBM39-216ENST00000444878 KRTAP10-6P60371 365 aaPredicted RBP6.76□□□□□ -1.33
RBM39-216ENST00000444878 NDUFAF8A1L188 74 aa6.73□□□□□ -1.33
RBM39-216ENST00000444878 KRTAP4-1Q9BYQ7 146 aa6.7□□□□□ -1.34
RBM39-216ENST00000444878 LCE2BO14633 110 aa6.67□□□□□ -1.34
RBM39-216ENST00000444878 PCLOQ9Y6V0 5065 aa6.64□□□□□ -1.35
RBM39-216ENST00000444878 HERC1Q15751 4861 aa6.64□□□□□ -1.35
RBM39-216ENST00000444878 KRTAP13-4Q3LI77 160 aa6.63□□□□□ -1.35
RBM39-216ENST00000444878 KRTAP25-1Q3LHN0 102 aa6.58□□□□□ -1.36
RBM39-216ENST00000444878 A0A0D9SG42 100 aa6.57□□□□□ -1.36
RBM39-216ENST00000444878 HMCN2Q8NDA2 5059 aa6.55□□□□□ -1.36
RBM39-216ENST00000444878 KRTAP19-2Q3LHN2 52 aa6.55□□□□□ -1.36
RBM39-216ENST00000444878 MUC2Q02817 5179 aa6.52□□□□□ -1.37
RBM39-216ENST00000444878 M0QZ58 72 aa6.5□□□□□ -1.37
RBM39-216ENST00000444878 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
RBM39-216ENST00000444878 FLGP20930 4061 aaPredicted RBP6.43□□□□□ -1.38
RBM39-216ENST00000444878 R4GN34 69 aa6.42□□□□□ -1.38
RBM39-216ENST00000444878 KRTAP12-2P59991 146 aa6.4□□□□□ -1.39
RBM39-216ENST00000444878 SPINT4Q6UDR6 99 aa6.4□□□□□ -1.39
RBM39-216ENST00000444878 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
RBM39-216ENST00000444878 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
RBM39-216ENST00000444878 FAT4Q6V0I7 4981 aa6.26□□□□□ -1.41
RBM39-216ENST00000444878 CRIPTQ9P021 101 aa6.25□□□□□ -1.41
RBM39-216ENST00000444878 UBR4Q5T4S7 5183 aa6.22□□□□□ -1.41
RBM39-216ENST00000444878 RNF213Q63HN8 5207 aa6.22□□□□□ -1.41
RBM39-216ENST00000444878 M0R2T5 61 aa6.17□□□□□ -1.42
RBM39-216ENST00000444878 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
RBM39-216ENST00000444878 MT1HP80294 61 aa6.15□□□□□ -1.42
RBM39-216ENST00000444878 C10orf95Q9H7T3 257 aa6.08□□□□□ -1.44
RBM39-216ENST00000444878 SPRR2GQ9BYE4 73 aa5.99□□□□□ -1.45
RBM39-216ENST00000444878 MT2AP02795 61 aa5.98□□□□□ -1.45
RBM39-216ENST00000444878 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
RBM39-216ENST00000444878 KRTAP9-8Q9BYQ0 159 aa5.96□□□□□ -1.45
RBM39-216ENST00000444878 MT1FP04733 61 aa5.96□□□□□ -1.46
RBM39-216ENST00000444878 KRTAP19-1Q8IUB9 90 aa5.96□□□□□ -1.46
RBM39-216ENST00000444878 PLAC4Q8WY50 150 aa5.9□□□□□ -1.46
RBM39-216ENST00000444878 TNP1P09430 55 aa5.79□□□□□ -1.48
RBM39-216ENST00000444878 KRTAP19-8Q3LI54 63 aa5.78□□□□□ -1.48
RBM39-216ENST00000444878 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
RBM39-216ENST00000444878 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
RBM39-216ENST00000444878 MT1BP07438 61 aa5.69□□□□□ -1.5
RBM39-216ENST00000444878 INE1O15225 51 aa5.62□□□□□ -1.51
RBM39-216ENST00000444878 KRTAP10-5P60370 271 aa5.58□□□□□ -1.52
RBM39-216ENST00000444878 MT1XP80297 61 aa5.58□□□□□ -1.52
RBM39-216ENST00000444878 LCE3AQ5TA76 89 aa5.49□□□□□ -1.53
RBM39-216ENST00000444878 KRTAP10-12P60413 245 aa5.41□□□□□ -1.54
RBM39-216ENST00000444878 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
RBM39-216ENST00000444878 USH2AO75445 5202 aa5.39□□□□□ -1.55
RBM39-216ENST00000444878 KRTAP8-1Q8IUC2 63 aa5.36□□□□□ -1.55
RBM39-216ENST00000444878 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
RBM39-216ENST00000444878 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
RBM39-216ENST00000444878 LCE5AQ5TCM9 118 aa5.25□□□□□ -1.57
RBM39-216ENST00000444878 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.57
RBM39-216ENST00000444878 SSPOA2VEC9 5147 aa5.16□□□□□ -1.58
RBM39-216ENST00000444878 KMT2DO14686 5537 aa5.15□□□□□ -1.59
RBM39-216ENST00000444878 KRTAP4-8A0A0G2JLE6 195 aa5.13□□□□□ -1.59
RBM39-216ENST00000444878 KRTAP19-5Q3LI72 72 aa5.13□□□□□ -1.59
RBM39-216ENST00000444878 KRTAP4-8Q9BYQ9 185 aa5.13□□□□□ -1.59
RBM39-216ENST00000444878 KRTAP19-6Q3LI70 58 aa5.09□□□□□ -1.59
RBM39-216ENST00000444878 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
RBM39-216ENST00000444878 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
RBM39-216ENST00000444878 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
RBM39-216ENST00000444878 KRTAP19-7Q3SYF9 63 aa4.97□□□□□ -1.61
RBM39-216ENST00000444878 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
RBM39-216ENST00000444878 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
RBM39-216ENST00000444878 KRTAP4-6Q9BYQ5 205 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms