RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 SEC61BP60468 96 aaKnown RBP8.02□□□□□ -1.13
SNX13-204ENST00000444712 CDC42SE1Q9NRR8 79 aa8.01□□□□□ -1.13
SNX13-204ENST00000444712 RBM12B-AS1Q9P1G2 102 aa7.98□□□□□ -1.13
SNX13-204ENST00000444712 UQCR11O14957 56 aa7.95□□□□□ -1.14
SNX13-204ENST00000444712 S4R3F8 94 aa7.95□□□□□ -1.14
SNX13-204ENST00000444712 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
SNX13-204ENST00000444712 LCA10Q71F78 164 aa7.95□□□□□ -1.14
SNX13-204ENST00000444712 ABCA13Q86UQ4 5058 aa7.92□□□□□ -1.14
SNX13-204ENST00000444712 SPATA8Q6RVD6 105 aa7.87□□□□□ -1.15
SNX13-204ENST00000444712 KRTAP3-3Q9BYR6 98 aa7.87□□□□□ -1.15
SNX13-204ENST00000444712 A8MU10 97 aa7.86□□□□□ -1.15
SNX13-204ENST00000444712 MIR22HGQ0VDD5 57 aa7.86□□□□□ -1.15
SNX13-204ENST00000444712 LRP2P98164 4655 aa7.84□□□□□ -1.15
SNX13-204ENST00000444712 LPAP08519 4548 aa7.82□□□□□ -1.16
SNX13-204ENST00000444712 A0A1B0GU33 70 aa7.79□□□□□ -1.16
SNX13-204ENST00000444712 PMAIP1Q13794 54 aa7.76□□□□□ -1.17
SNX13-204ENST00000444712 CSAG1Q6PB30 78 aa7.75□□□□□ -1.17
SNX13-204ENST00000444712 KRTAP4-1Q9BYQ7 146 aa7.69□□□□□ -1.18
SNX13-204ENST00000444712 H0YAA0 97 aa7.68□□□□□ -1.18
SNX13-204ENST00000444712 KRTAP10-6P60371 365 aaPredicted RBP7.67□□□□□ -1.18
SNX13-204ENST00000444712 A6NN06 94 aa7.66□□□□□ -1.18
SNX13-204ENST00000444712 MUC17Q685J3 4493 aa7.65□□□□□ -1.18
SNX13-204ENST00000444712 KRTAP3-2Q9BYR7 98 aa7.65□□□□□ -1.18
SNX13-204ENST00000444712 HERC1Q15751 4861 aa7.61□□□□□ -1.19
SNX13-204ENST00000444712 ADM2Q7Z4H4 148 aa7.61□□□□□ -1.19
SNX13-204ENST00000444712 P0C880 135 aa7.56□□□□□ -1.2
SNX13-204ENST00000444712 KRTAP19-2Q3LHN2 52 aa7.55□□□□□ -1.2
SNX13-204ENST00000444712 KTN1-AS1Q86SY8 53 aa7.54□□□□□ -1.2
SNX13-204ENST00000444712 K7ERS5 55 aa7.53□□□□□ -1.2
SNX13-204ENST00000444712 M0QZ58 72 aa7.49□□□□□ -1.21
SNX13-204ENST00000444712 KRTAP13-4Q3LI77 160 aa7.47□□□□□ -1.21
SNX13-204ENST00000444712 HMCN2Q8NDA2 5059 aa7.42□□□□□ -1.22
SNX13-204ENST00000444712 A0A0D9SG42 100 aa7.39□□□□□ -1.23
SNX13-204ENST00000444712 R4GN34 69 aa7.35□□□□□ -1.23
SNX13-204ENST00000444712 LCE2CQ5TA81 110 aa7.27□□□□□ -1.25
SNX13-204ENST00000444712 FLGP20930 4061 aaPredicted RBP7.27□□□□□ -1.25
SNX13-204ENST00000444712 KRTAP12-1P59990 96 aa7.24□□□□□ -1.25
SNX13-204ENST00000444712 SPINT4Q6UDR6 99 aa7.23□□□□□ -1.25
SNX13-204ENST00000444712 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
SNX13-204ENST00000444712 KRTAP12-2P59991 146 aa7.22□□□□□ -1.25
SNX13-204ENST00000444712 ROMO1P60602 79 aa7.2□□□□□ -1.26
SNX13-204ENST00000444712 LORP23490 312 aaPredicted RBP7.19□□□□□ -1.26
SNX13-204ENST00000444712 LINC01554Q52M75 96 aa7.18□□□□□ -1.26
SNX13-204ENST00000444712 MUC2Q02817 5179 aa7.18□□□□□ -1.26
SNX13-204ENST00000444712 PRAC1Q96KF2 57 aa7.18□□□□□ -1.26
SNX13-204ENST00000444712 UBR4Q5T4S7 5183 aa7.16□□□□□ -1.26
SNX13-204ENST00000444712 M0R2T5 61 aa7.15□□□□□ -1.27
SNX13-204ENST00000444712 MT1HP80294 61 aa7.14□□□□□ -1.27
SNX13-204ENST00000444712 RNF213Q63HN8 5207 aa7.03□□□□□ -1.28
SNX13-204ENST00000444712 KRTAP25-1Q3LHN0 102 aa7.01□□□□□ -1.29
SNX13-204ENST00000444712 SPRR2GQ9BYE4 73 aa6.94□□□□□ -1.3
SNX13-204ENST00000444712 CAMK2N1Q7Z7J9 78 aa6.92□□□□□ -1.3
SNX13-204ENST00000444712 MT2AP02795 61 aa6.91□□□□□ -1.3
SNX13-204ENST00000444712 KRTAP10-10P60014 251 aa6.9□□□□□ -1.3
SNX13-204ENST00000444712 KRTAP9-8Q9BYQ0 159 aa6.9□□□□□ -1.3
SNX13-204ENST00000444712 FAT4Q6V0I7 4981 aa6.87□□□□□ -1.31
SNX13-204ENST00000444712 MT1FP04733 61 aa6.87□□□□□ -1.31
SNX13-204ENST00000444712 KRTAP19-1Q8IUB9 90 aa6.85□□□□□ -1.31
SNX13-204ENST00000444712 C10orf95Q9H7T3 257 aa6.83□□□□□ -1.32
SNX13-204ENST00000444712 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
SNX13-204ENST00000444712 KRTAP19-8Q3LI54 63 aa6.72□□□□□ -1.33
SNX13-204ENST00000444712 LCE2DQ5TA82 110 aaPredicted RBP6.69□□□□□ -1.34
SNX13-204ENST00000444712 LCE2AQ5TA79 106 aaPredicted RBP6.66□□□□□ -1.34
SNX13-204ENST00000444712 TNP1P09430 55 aa6.64□□□□□ -1.35
SNX13-204ENST00000444712 KRTAP9-3Q9BYQ3 159 aa6.64□□□□□ -1.35
SNX13-204ENST00000444712 PP632Q6XCG6 107 aa6.63□□□□□ -1.35
SNX13-204ENST00000444712 MT1BP07438 61 aa6.57□□□□□ -1.36
SNX13-204ENST00000444712 KRTAP23-1A1A580 65 aa6.55□□□□□ -1.36
SNX13-204ENST00000444712 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
SNX13-204ENST00000444712 KRTAP10-5P60370 271 aa6.42□□□□□ -1.38
SNX13-204ENST00000444712 MT1XP80297 61 aa6.42□□□□□ -1.38
SNX13-204ENST00000444712 LCE2BO14633 110 aa6.4□□□□□ -1.39
SNX13-204ENST00000444712 KRTAP9-2Q9BYQ4 174 aa6.39□□□□□ -1.39
SNX13-204ENST00000444712 KRTAP15-1Q3LI76 137 aa6.25□□□□□ -1.41
SNX13-204ENST00000444712 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
SNX13-204ENST00000444712 KRTAP10-12P60413 245 aa6.22□□□□□ -1.41
SNX13-204ENST00000444712 KRTAP9-6A0A140TA67 174 aa6.18□□□□□ -1.42
SNX13-204ENST00000444712 KRTAP8-1Q8IUC2 63 aa6.16□□□□□ -1.42
SNX13-204ENST00000444712 KRTAP10-7P60409 375 aaPredicted RBP6.16□□□□□ -1.42
SNX13-204ENST00000444712 FSIP2Q5CZC0 6907 aa6.07□□□□□ -1.44
SNX13-204ENST00000444712 CRCT1Q9UGL9 99 aa6.03□□□□□ -1.44
SNX13-204ENST00000444712 KRTAP12-3P60328 96 aa6.01□□□□□ -1.45
SNX13-204ENST00000444712 USH2AO75445 5202 aa6□□□□□ -1.45
SNX13-204ENST00000444712 KRTAP19-6Q3LI70 58 aa5.99□□□□□ -1.45
SNX13-204ENST00000444712 SPRR5A0A1B0GTR4 108 aa5.91□□□□□ -1.46
SNX13-204ENST00000444712 LUZP6Q538Z0 58 aa5.91□□□□□ -1.46
SNX13-204ENST00000444712 NDUFAF8A1L188 74 aa5.87□□□□□ -1.47
SNX13-204ENST00000444712 KRTAP19-5Q3LI72 72 aa5.86□□□□□ -1.47
SNX13-204ENST00000444712 SSPOA2VEC9 5147 aa5.85□□□□□ -1.47
SNX13-204ENST00000444712 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
SNX13-204ENST00000444712 KRTAP4-8Q9BYQ9 185 aa5.82□□□□□ -1.48
SNX13-204ENST00000444712 KRTAP19-7Q3SYF9 63 aa5.72□□□□□ -1.49
SNX13-204ENST00000444712 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
SNX13-204ENST00000444712 LCE3CQ5T5A8 94 aa5.64□□□□□ -1.51
SNX13-204ENST00000444712 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.62□□□□□ -1.51
SNX13-204ENST00000444712 MT1EP04732 61 aa5.62□□□□□ -1.51
SNX13-204ENST00000444712 KMT2DO14686 5537 aa5.6□□□□□ -1.51
SNX13-204ENST00000444712 FCGBPQ9Y6R7 5405 aaPredicted RBP5.59□□□□□ -1.51
SNX13-204ENST00000444712 H3BS24 57 aa5.58□□□□□ -1.52
SNX13-204ENST00000444712 KRTAP9-7A8MTY7 169 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms