RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 NDUFC1O43677 76 aa7.65□□□□□ -1.18
TSPAN9-204ENST00000444315 SCGB1A1P11684 91 aa7.63□□□□□ -1.19
TSPAN9-204ENST00000444315 KLKP1Q107X0 134 aa7.61□□□□□ -1.19
TSPAN9-204ENST00000444315 Q5VV11 94 aa7.6□□□□□ -1.19
TSPAN9-204ENST00000444315 A8MUN3 132 aa7.59□□□□□ -1.19
TSPAN9-204ENST00000444315 KRTAP3-3Q9BYR6 98 aa7.59□□□□□ -1.19
TSPAN9-204ENST00000444315 IMUPQ9GZP8 106 aa7.59□□□□□ -1.19
TSPAN9-204ENST00000444315 OCR1Q9BZK8 76 aa7.57□□□□□ -1.2
TSPAN9-204ENST00000444315 H3BPC8 53 aa7.51□□□□□ -1.21
TSPAN9-204ENST00000444315 SPRR2GQ9BYE4 73 aa7.51□□□□□ -1.21
TSPAN9-204ENST00000444315 CRIPTQ9P021 101 aa7.51□□□□□ -1.21
TSPAN9-204ENST00000444315 MACF1Q9UPN3 7388 aaKnown RBP7.51□□□□□ -1.21
TSPAN9-204ENST00000444315 A6NN06 94 aa7.5□□□□□ -1.21
TSPAN9-204ENST00000444315 ADM2Q7Z4H4 148 aa7.46□□□□□ -1.22
TSPAN9-204ENST00000444315 MT1BP07438 61 aa7.44□□□□□ -1.22
TSPAN9-204ENST00000444315 KRTAP19-8Q3LI54 63 aa7.44□□□□□ -1.22
TSPAN9-204ENST00000444315 SYNE2Q8WXH0 6885 aaKnown RBP7.43□□□□□ -1.22
TSPAN9-204ENST00000444315 H0YAA0 97 aa7.42□□□□□ -1.22
TSPAN9-204ENST00000444315 K7ERU9 68 aa7.42□□□□□ -1.22
TSPAN9-204ENST00000444315 MT-ATP8P03928 68 aa7.36□□□□□ -1.23
TSPAN9-204ENST00000444315 C20orf197Q8N268 126 aa7.36□□□□□ -1.23
TSPAN9-204ENST00000444315 DMAC1Q96GE9 116 aa7.36□□□□□ -1.23
TSPAN9-204ENST00000444315 SMIM20Q8N5G0 67 aa7.35□□□□□ -1.23
TSPAN9-204ENST00000444315 TRAV7A0A075B6U4 112 aa7.31□□□□□ -1.24
TSPAN9-204ENST00000444315 R4GN34 69 aa7.31□□□□□ -1.24
TSPAN9-204ENST00000444315 KRTAP10-5P60370 271 aa7.3□□□□□ -1.24
TSPAN9-204ENST00000444315 KRTAP6-3Q3LI67 103 aa7.28□□□□□ -1.24
TSPAN9-204ENST00000444315 ACYP2P14621 99 aa7.27□□□□□ -1.25
TSPAN9-204ENST00000444315 PLAC4Q8WY50 150 aa7.26□□□□□ -1.25
TSPAN9-204ENST00000444315 CHKB-CPT1BH3BT56 60 aa7.25□□□□□ -1.25
TSPAN9-204ENST00000444315 M0QZ58 72 aa7.25□□□□□ -1.25
TSPAN9-204ENST00000444315 SPTSSBQ8NFR3 76 aa7.25□□□□□ -1.25
TSPAN9-204ENST00000444315 P0C880 135 aa7.21□□□□□ -1.26
TSPAN9-204ENST00000444315 LINC01554Q52M75 96 aa7.2□□□□□ -1.26
TSPAN9-204ENST00000444315 PRO2289Q9P1D8 64 aa7.2□□□□□ -1.26
TSPAN9-204ENST00000444315 SNURFQ9Y675 71 aa7.19□□□□□ -1.26
TSPAN9-204ENST00000444315 KRTAP3-2Q9BYR7 98 aa7.08□□□□□ -1.28
TSPAN9-204ENST00000444315 SERP2Q8N6R1 65 aa7.07□□□□□ -1.28
TSPAN9-204ENST00000444315 SPANXA2-OT1Q8N9U9 137 aa7.02□□□□□ -1.29
TSPAN9-204ENST00000444315 MUC12Q9UKN1 5478 aa7.01□□□□□ -1.29
TSPAN9-204ENST00000444315 MT1XP80297 61 aa7□□□□□ -1.29
TSPAN9-204ENST00000444315 NEBP20929 6669 aa6.95□□□□□ -1.3
TSPAN9-204ENST00000444315 KRTAP5-9P26371 169 aa6.91□□□□□ -1.3
TSPAN9-204ENST00000444315 COA5Q86WW8 74 aa6.89□□□□□ -1.31
TSPAN9-204ENST00000444315 KMT2DO14686 5537 aa6.89□□□□□ -1.31
TSPAN9-204ENST00000444315 SEC61GP60059 68 aa6.88□□□□□ -1.31
TSPAN9-204ENST00000444315 KRTAP8-1Q8IUC2 63 aa6.88□□□□□ -1.31
TSPAN9-204ENST00000444315 SPRR2FQ96RM1 72 aa6.88□□□□□ -1.31
TSPAN9-204ENST00000444315 COX7CP15954 63 aa6.86□□□□□ -1.31
TSPAN9-204ENST00000444315 SERP1Q9Y6X1 66 aa6.84□□□□□ -1.31
TSPAN9-204ENST00000444315 MDN1Q9NU22 5596 aa6.83□□□□□ -1.32
TSPAN9-204ENST00000444315 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
TSPAN9-204ENST00000444315 KRTAP20-1Q3LI63 56 aa6.81□□□□□ -1.32
TSPAN9-204ENST00000444315 CAMK2N1Q7Z7J9 78 aa6.79□□□□□ -1.32
TSPAN9-204ENST00000444315 SPRR2EP22531 72 aa6.78□□□□□ -1.32
TSPAN9-204ENST00000444315 SPRR2BP35325 72 aa6.78□□□□□ -1.32
TSPAN9-204ENST00000444315 SPRR2AP35326 72 aa6.78□□□□□ -1.32
TSPAN9-204ENST00000444315 KRTAP13-4Q3LI77 160 aa6.72□□□□□ -1.33
TSPAN9-204ENST00000444315 ANAPC13Q9BS18 74 aa6.72□□□□□ -1.33
TSPAN9-204ENST00000444315 KRTAP10-7P60409 375 aaPredicted RBP6.71□□□□□ -1.34
TSPAN9-204ENST00000444315 A0A0D9SG42 100 aa6.7□□□□□ -1.34
TSPAN9-204ENST00000444315 H7BZZ5 65 aa6.7□□□□□ -1.34
TSPAN9-204ENST00000444315 KRTAP4-8A0A0G2JLE6 195 aa6.69□□□□□ -1.34
TSPAN9-204ENST00000444315 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
TSPAN9-204ENST00000444315 CYSTM1Q9H1C7 97 aa6.66□□□□□ -1.34
TSPAN9-204ENST00000444315 A0A1B0GU33 70 aa6.64□□□□□ -1.35
TSPAN9-204ENST00000444315 KRTAP10-12P60413 245 aa6.64□□□□□ -1.35
TSPAN9-204ENST00000444315 SPATA8Q6RVD6 105 aa6.62□□□□□ -1.35
TSPAN9-204ENST00000444315 SPINT4Q6UDR6 99 aa6.62□□□□□ -1.35
TSPAN9-204ENST00000444315 A0A1B0GU69 56 aa6.6□□□□□ -1.35
TSPAN9-204ENST00000444315 KRTAP2-3P0C7H8 128 aa6.6□□□□□ -1.35
TSPAN9-204ENST00000444315 KRTAP2-4Q9BYR9 128 aa6.6□□□□□ -1.35
TSPAN9-204ENST00000444315 LCE1AQ5T7P2 110 aa6.57□□□□□ -1.36
TSPAN9-204ENST00000444315 SPRR2DP22532 72 aa6.56□□□□□ -1.36
TSPAN9-204ENST00000444315 SMIM26A0A096LP01 95 aa6.5□□□□□ -1.37
TSPAN9-204ENST00000444315 CCDC179H3BU77 68 aa6.5□□□□□ -1.37
TSPAN9-204ENST00000444315 ATP5EP56381 51 aaPredicted RBP6.48□□□□□ -1.37
TSPAN9-204ENST00000444315 PRR15LQ9BU68 103 aa6.47□□□□□ -1.37
TSPAN9-204ENST00000444315 KRTAP12-1P59990 96 aa6.42□□□□□ -1.38
TSPAN9-204ENST00000444315 KRTAP2-2Q9BYT5 123 aa6.39□□□□□ -1.39
TSPAN9-204ENST00000444315 KRTAP2-1Q9BYU5 128 aa6.39□□□□□ -1.39
TSPAN9-204ENST00000444315 A8MU10 97 aa6.38□□□□□ -1.39
TSPAN9-204ENST00000444315 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
TSPAN9-204ENST00000444315 TMEM258P61165 79 aa6.3□□□□□ -1.4
TSPAN9-204ENST00000444315 LINC01558Q9Y6Z2 57 aa6.25□□□□□ -1.41
TSPAN9-204ENST00000444315 KRTAP19-7Q3SYF9 63 aa6.23□□□□□ -1.41
TSPAN9-204ENST00000444315 MT1EP04732 61 aa6.21□□□□□ -1.42
TSPAN9-204ENST00000444315 TNP1P09430 55 aa6.21□□□□□ -1.42
TSPAN9-204ENST00000444315 KRTAP19-3Q7Z4W3 81 aa6.18□□□□□ -1.42
TSPAN9-204ENST00000444315 UQCR11O14957 56 aa6.17□□□□□ -1.42
TSPAN9-204ENST00000444315 KRTAP19-5Q3LI72 72 aa6.17□□□□□ -1.42
TSPAN9-204ENST00000444315 LCE5AQ5TCM9 118 aa6.13□□□□□ -1.43
TSPAN9-204ENST00000444315 C10orf95Q9H7T3 257 aa6.12□□□□□ -1.43
TSPAN9-204ENST00000444315 PP632Q6XCG6 107 aa6.09□□□□□ -1.43
TSPAN9-204ENST00000444315 LCE3AQ5TA76 89 aa6.08□□□□□ -1.44
TSPAN9-204ENST00000444315 MIR22HGQ0VDD5 57 aa6.05□□□□□ -1.44
TSPAN9-204ENST00000444315 K7ERS5 55 aa6.04□□□□□ -1.44
TSPAN9-204ENST00000444315 MT1GP13640 62 aa6.03□□□□□ -1.44
TSPAN9-204ENST00000444315 V9GYY9 64 aa6.01□□□□□ -1.45
TSPAN9-204ENST00000444315 DSTQ03001 7570 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms