RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 MYCBP2O75592 4640 aa9.77□□□□□ -0.85
LRCH3-207ENST00000441090 A0A1B0GU33 70 aa9.67□□□□□ -0.86
LRCH3-207ENST00000441090 H0YAA0 97 aa9.67□□□□□ -0.86
LRCH3-207ENST00000441090 EPPK1P58107 5090 aaKnown RBP9.66□□□□□ -0.86
LRCH3-207ENST00000441090 H1FX-AS1Q4G0G2 97 aa9.65□□□□□ -0.86
LRCH3-207ENST00000441090 KRTAP3-3Q9BYR6 98 aa9.61□□□□□ -0.87
LRCH3-207ENST00000441090 TPRXLQ17RH7 258 aa9.57□□□□□ -0.88
LRCH3-207ENST00000441090 RBM12B-AS1Q9P1G2 102 aa9.57□□□□□ -0.88
LRCH3-207ENST00000441090 S4R3F8 94 aa9.55□□□□□ -0.88
LRCH3-207ENST00000441090 ADM2Q7Z4H4 148 aa9.51□□□□□ -0.89
LRCH3-207ENST00000441090 PRAC1Q96KF2 57 aa9.49□□□□□ -0.89
LRCH3-207ENST00000441090 LRP2P98164 4655 aa9.47□□□□□ -0.89
LRCH3-207ENST00000441090 KRTAP10-6P60371 365 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-207ENST00000441090 LPAP08519 4548 aa9.45□□□□□ -0.9
LRCH3-207ENST00000441090 KRTAP4-5Q9BYR2 181 aa9.45□□□□□ -0.9
LRCH3-207ENST00000441090 ABCA13Q86UQ4 5058 aa9.42□□□□□ -0.9
LRCH3-207ENST00000441090 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
LRCH3-207ENST00000441090 KRTAP13-4Q3LI77 160 aa9.32□□□□□ -0.92
LRCH3-207ENST00000441090 K7ERS5 55 aa9.31□□□□□ -0.92
LRCH3-207ENST00000441090 P0C880 135 aa9.29□□□□□ -0.92
LRCH3-207ENST00000441090 CSAG1Q6PB30 78 aa9.26□□□□□ -0.93
LRCH3-207ENST00000441090 SEC61BP60468 96 aaKnown RBP9.2□□□□□ -0.94
LRCH3-207ENST00000441090 A0A0D9SG42 100 aa9.19□□□□□ -0.94
LRCH3-207ENST00000441090 J3QL48 77 aa9.16□□□□□ -0.94
LRCH3-207ENST00000441090 MUC17Q685J3 4493 aa9.15□□□□□ -0.94
LRCH3-207ENST00000441090 LINC01554Q52M75 96 aa9.14□□□□□ -0.95
LRCH3-207ENST00000441090 HERC2O95714 4834 aa9.13□□□□□ -0.95
LRCH3-207ENST00000441090 KRTAP25-1Q3LHN0 102 aa9.07□□□□□ -0.96
LRCH3-207ENST00000441090 ROMO1P60602 79 aa9.07□□□□□ -0.96
LRCH3-207ENST00000441090 KRTAP4-1Q9BYQ7 146 aa9.05□□□□□ -0.96
LRCH3-207ENST00000441090 M0QZ58 72 aa9.04□□□□□ -0.96
LRCH3-207ENST00000441090 KRTAP12-2P59991 146 aa9□□□□□ -0.97
LRCH3-207ENST00000441090 BIRC6Q9NR09 4857 aa8.99□□□□□ -0.97
LRCH3-207ENST00000441090 KRTAP12-1P59990 96 aa8.97□□□□□ -0.97
LRCH3-207ENST00000441090 CRIPTQ9P021 101 aa8.93□□□□□ -0.98
LRCH3-207ENST00000441090 SPINT4Q6UDR6 99 aa8.92□□□□□ -0.98
LRCH3-207ENST00000441090 KRTAP19-2Q3LHN2 52 aa8.91□□□□□ -0.98
LRCH3-207ENST00000441090 R4GN34 69 aa8.83□□□□□ -1
LRCH3-207ENST00000441090 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
LRCH3-207ENST00000441090 FLGP20930 4061 aaPredicted RBP8.73□□□□□ -1.01
LRCH3-207ENST00000441090 MUC2Q02817 5179 aa8.7□□□□□ -1.02
LRCH3-207ENST00000441090 C10orf95Q9H7T3 257 aa8.69□□□□□ -1.02
LRCH3-207ENST00000441090 PCLOQ9Y6V0 5065 aa8.67□□□□□ -1.02
LRCH3-207ENST00000441090 HERC1Q15751 4861 aa8.65□□□□□ -1.03
LRCH3-207ENST00000441090 HMCN2Q8NDA2 5059 aa8.65□□□□□ -1.03
LRCH3-207ENST00000441090 LCE2CQ5TA81 110 aa8.43□□□□□ -1.06
LRCH3-207ENST00000441090 CAMK2N1Q7Z7J9 78 aa8.35□□□□□ -1.07
LRCH3-207ENST00000441090 FAT4Q6V0I7 4981 aa8.28□□□□□ -1.08
LRCH3-207ENST00000441090 RNF213Q63HN8 5207 aa8.28□□□□□ -1.08
LRCH3-207ENST00000441090 KRTAP15-1Q3LI76 137 aa8.22□□□□□ -1.09
LRCH3-207ENST00000441090 MT1HP80294 61 aa8.21□□□□□ -1.1
LRCH3-207ENST00000441090 UBR4Q5T4S7 5183 aa8.21□□□□□ -1.1
LRCH3-207ENST00000441090 M0R2T5 61 aa8.18□□□□□ -1.1
LRCH3-207ENST00000441090 SPRR2GQ9BYE4 73 aa8.17□□□□□ -1.1
LRCH3-207ENST00000441090 PP632Q6XCG6 107 aa8.13□□□□□ -1.11
LRCH3-207ENST00000441090 KRTAP19-1Q8IUB9 90 aa8.12□□□□□ -1.11
LRCH3-207ENST00000441090 MT2AP02795 61 aa8.03□□□□□ -1.12
LRCH3-207ENST00000441090 TNP1P09430 55 aa8.03□□□□□ -1.12
LRCH3-207ENST00000441090 PLAC4Q8WY50 150 aa8.03□□□□□ -1.12
LRCH3-207ENST00000441090 MT1FP04733 61 aa8.02□□□□□ -1.13
LRCH3-207ENST00000441090 KRTAP9-8Q9BYQ0 159 aa8□□□□□ -1.13
LRCH3-207ENST00000441090 KRTAP10-10P60014 251 aa7.99□□□□□ -1.13
LRCH3-207ENST00000441090 H3BS24 57 aa7.97□□□□□ -1.13
LRCH3-207ENST00000441090 KRTAP23-1A1A580 65 aa7.95□□□□□ -1.14
LRCH3-207ENST00000441090 NDUFAF8A1L188 74 aa7.88□□□□□ -1.15
LRCH3-207ENST00000441090 KRTAP19-8Q3LI54 63 aa7.85□□□□□ -1.15
LRCH3-207ENST00000441090 MT1BP07438 61 aa7.73□□□□□ -1.17
LRCH3-207ENST00000441090 KRTAP9-3Q9BYQ3 159 aa7.68□□□□□ -1.18
LRCH3-207ENST00000441090 KRTAP10-5P60370 271 aa7.63□□□□□ -1.19
LRCH3-207ENST00000441090 MT1XP80297 61 aa7.62□□□□□ -1.19
LRCH3-207ENST00000441090 LCE3AQ5TA76 89 aa7.62□□□□□ -1.19
LRCH3-207ENST00000441090 LUZP6Q538Z0 58 aa7.54□□□□□ -1.2
LRCH3-207ENST00000441090 SPRR5A0A1B0GTR4 108 aa7.51□□□□□ -1.21
LRCH3-207ENST00000441090 KRTAP8-1Q8IUC2 63 aa7.48□□□□□ -1.21
LRCH3-207ENST00000441090 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
LRCH3-207ENST00000441090 KRTAP10-12P60413 245 aa7.42□□□□□ -1.22
LRCH3-207ENST00000441090 PRO2289Q9P1D8 64 aa7.4□□□□□ -1.23
LRCH3-207ENST00000441090 LCE2BO14633 110 aa7.39□□□□□ -1.23
LRCH3-207ENST00000441090 KRTAP10-7P60409 375 aaPredicted RBP7.38□□□□□ -1.23
LRCH3-207ENST00000441090 KRTAP12-3P60328 96 aa7.28□□□□□ -1.24
LRCH3-207ENST00000441090 USH2AO75445 5202 aa7.16□□□□□ -1.26
LRCH3-207ENST00000441090 KRTAP19-5Q3LI72 72 aa7.04□□□□□ -1.28
LRCH3-207ENST00000441090 A0A0A0MQY5 61 aa7□□□□□ -1.29
LRCH3-207ENST00000441090 KMT2DO14686 5537 aa6.97□□□□□ -1.29
LRCH3-207ENST00000441090 KRTAP4-8A0A0G2JLE6 195 aa6.94□□□□□ -1.3
LRCH3-207ENST00000441090 KRTAP4-8Q9BYQ9 185 aa6.94□□□□□ -1.3
LRCH3-207ENST00000441090 SSPOA2VEC9 5147 aa6.85□□□□□ -1.31
LRCH3-207ENST00000441090 LCE3CQ5T5A8 94 aa6.85□□□□□ -1.31
LRCH3-207ENST00000441090 KRTAP19-7Q3SYF9 63 aa6.8□□□□□ -1.32
LRCH3-207ENST00000441090 KRTAP19-6Q3LI70 58 aa6.73□□□□□ -1.33
LRCH3-207ENST00000441090 KRTAP19-4Q3LI73 84 aa6.63□□□□□ -1.35
LRCH3-207ENST00000441090 MT1EP04732 61 aa6.62□□□□□ -1.35
LRCH3-207ENST00000441090 MT1LQ93083 61 aa6.59□□□□□ -1.36
LRCH3-207ENST00000441090 KRTAP9-6A8MVA2 160 aa6.57□□□□□ -1.36
LRCH3-207ENST00000441090 KRTAP4-7Q9BYR0 210 aa6.54□□□□□ -1.36
LRCH3-207ENST00000441090 FSIP2Q5CZC0 6907 aa6.54□□□□□ -1.36
LRCH3-207ENST00000441090 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
LRCH3-207ENST00000441090 INE1O15225 51 aa6.42□□□□□ -1.38
LRCH3-207ENST00000441090 FCGBPQ9Y6R7 5405 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-207ENST00000441090 KRTAP2-3P0C7H8 128 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms