RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 KRTAP13-2Q52LG2 175 aa3.46□□□□□ -1.86
PTPRR-204ENST00000440835 RPS29P62273 56 aaKnown RBP3.45□□□□□ -1.86
PTPRR-204ENST00000440835 MIR22HGQ0VDD5 57 aa3.45□□□□□ -1.86
PTPRR-204ENST00000440835 IGLV8-61A0A075B6I0 122 aa3.45□□□□□ -1.86
PTPRR-204ENST00000440835 KRTAP9-6A0A140TA67 174 aa3.45□□□□□ -1.86
PTPRR-204ENST00000440835 A0A087WSZ3 146 aa3.44□□□□□ -1.86
PTPRR-204ENST00000440835 A8MWP4 228 aa3.44□□□□□ -1.86
PTPRR-204ENST00000440835 PCOTHQ58A44 107 aa3.44□□□□□ -1.86
PTPRR-204ENST00000440835 LINC00483Q53H64 154 aa3.43□□□□□ -1.86
PTPRR-204ENST00000440835 IGFL1Q6UW32 110 aa3.43□□□□□ -1.86
PTPRR-204ENST00000440835 SPINK1P00995 79 aa3.43□□□□□ -1.86
PTPRR-204ENST00000440835 HRES1P13985 223 aa3.42□□□□□ -1.86
PTPRR-204ENST00000440835 CSAG1Q6PB30 78 aa3.41□□□□□ -1.86
PTPRR-204ENST00000440835 FAT4Q6V0I7 4981 aa3.41□□□□□ -1.86
PTPRR-204ENST00000440835 SSBP3-AS1Q7Z2R9 100 aa3.4□□□□□ -1.86
PTPRR-204ENST00000440835 KRTAP13-3Q3SY46 172 aa3.4□□□□□ -1.87
PTPRR-204ENST00000440835 CAMK2N1Q7Z7J9 78 aa3.4□□□□□ -1.87
PTPRR-204ENST00000440835 ANAPC11Q9NYG5 84 aa3.39□□□□□ -1.87
PTPRR-204ENST00000440835 MMP24-AS1A0A0U1RRL7 71 aa3.38□□□□□ -1.87
PTPRR-204ENST00000440835 LOC100996750A0A140TA64 210 aa3.38□□□□□ -1.87
PTPRR-204ENST00000440835 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
PTPRR-204ENST00000440835 LINC00472Q9H8W2 130 aa3.38□□□□□ -1.87
PTPRR-204ENST00000440835 C20orf166-AS1Q96NR2 134 aa3.37□□□□□ -1.87
PTPRR-204ENST00000440835 P0C880 135 aa3.35□□□□□ -1.87
PTPRR-204ENST00000440835 MUC2Q02817 5179 aa3.34□□□□□ -1.87
PTPRR-204ENST00000440835 SPATA8Q6RVD6 105 aa3.34□□□□□ -1.87
PTPRR-204ENST00000440835 DMAC1Q96GE9 116 aa3.34□□□□□ -1.87
PTPRR-204ENST00000440835 KRTAP25-1Q3LHN0 102 aa3.33□□□□□ -1.88
PTPRR-204ENST00000440835 A0A1B0GVX0 72 aa3.32□□□□□ -1.88
PTPRR-204ENST00000440835 TP53AIP1Q9HCN2 124 aa3.31□□□□□ -1.88
PTPRR-204ENST00000440835 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
PTPRR-204ENST00000440835 CRCT1Q9UGL9 99 aa3.31□□□□□ -1.88
PTPRR-204ENST00000440835 UQCR11O14957 56 aa3.3□□□□□ -1.88
PTPRR-204ENST00000440835 Q96NJ1 140 aa3.3□□□□□ -1.88
PTPRR-204ENST00000440835 A0A1B0GU69 56 aa3.29□□□□□ -1.88
PTPRR-204ENST00000440835 KRTAP4-1Q9BYQ7 146 aa3.29□□□□□ -1.88
PTPRR-204ENST00000440835 A8MUU9 505 aa3.28□□□□□ -1.88
PTPRR-204ENST00000440835 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
PTPRR-204ENST00000440835 Q5W150 140 aa3.27□□□□□ -1.89
PTPRR-204ENST00000440835 ACYP2P14621 99 aa3.26□□□□□ -1.89
PTPRR-204ENST00000440835 KRTAP19-2Q3LHN2 52 aa3.25□□□□□ -1.89
PTPRR-204ENST00000440835 MRPL34Q9BQ48 92 aaKnown RBP3.25□□□□□ -1.89
PTPRR-204ENST00000440835 MT1HP80294 61 aa3.25□□□□□ -1.89
PTPRR-204ENST00000440835 KRTAP10-6P60371 365 aaPredicted RBP3.22□□□□□ -1.89
PTPRR-204ENST00000440835 RPL37P61927 97 aaKnown RBP3.21□□□□□ -1.9
PTPRR-204ENST00000440835 C9orf92A6NGG3 77 aa3.18□□□□□ -1.9
PTPRR-204ENST00000440835 COX6B2Q6YFQ2 88 aa3.18□□□□□ -1.9
PTPRR-204ENST00000440835 M0R2T5 61 aa3.17□□□□□ -1.9
PTPRR-204ENST00000440835 KRTAP15-1Q3LI76 137 aa3.17□□□□□ -1.9
PTPRR-204ENST00000440835 SPINT4Q6UDR6 99 aa3.16□□□□□ -1.9
PTPRR-204ENST00000440835 CRIPTQ9P021 101 aa3.15□□□□□ -1.9
PTPRR-204ENST00000440835 H0YAA0 97 aa3.15□□□□□ -1.91
PTPRR-204ENST00000440835 A0A1B0GU33 70 aa3.14□□□□□ -1.91
PTPRR-204ENST00000440835 IGKV2-30P06310 120 aa3.13□□□□□ -1.91
PTPRR-204ENST00000440835 FLGP20930 4061 aaPredicted RBP3.13□□□□□ -1.91
PTPRR-204ENST00000440835 KRTAP9-7A8MTY7 169 aa3.08□□□□□ -1.92
PTPRR-204ENST00000440835 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.08□□□□□ -1.92
PTPRR-204ENST00000440835 IGKV2D-30A0A075B6S6 120 aa3.07□□□□□ -1.92
PTPRR-204ENST00000440835 KRTAP9-8Q9BYQ0 159 aa3.05□□□□□ -1.92
PTPRR-204ENST00000440835 FSIP2Q5CZC0 6907 aa3.03□□□□□ -1.92
PTPRR-204ENST00000440835 H1FX-AS1Q4G0G2 97 aa3.02□□□□□ -1.93
PTPRR-204ENST00000440835 PRO2289Q9P1D8 64 aa3.01□□□□□ -1.93
PTPRR-204ENST00000440835 MT2AP02795 61 aa2.99□□□□□ -1.93
PTPRR-204ENST00000440835 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
PTPRR-204ENST00000440835 KRTAP19-1Q8IUB9 90 aa2.97□□□□□ -1.93
PTPRR-204ENST00000440835 KRTAP9-3Q9BYQ3 159 aa2.97□□□□□ -1.93
PTPRR-204ENST00000440835 KRTAP10-10P60014 251 aa2.96□□□□□ -1.94
PTPRR-204ENST00000440835 KRTAP3-1Q9BYR8 98 aa2.95□□□□□ -1.94
PTPRR-204ENST00000440835 MT1FP04733 61 aa2.95□□□□□ -1.94
PTPRR-204ENST00000440835 USH2AO75445 5202 aa2.95□□□□□ -1.94
PTPRR-204ENST00000440835 KRTAP19-6Q3LI70 58 aa2.94□□□□□ -1.94
PTPRR-204ENST00000440835 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
PTPRR-204ENST00000440835 R4GN34 69 aa2.92□□□□□ -1.94
PTPRR-204ENST00000440835 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
PTPRR-204ENST00000440835 FCGBPQ9Y6R7 5405 aaPredicted RBP2.91□□□□□ -1.94
PTPRR-204ENST00000440835 KRTAP13-4Q3LI77 160 aa2.91□□□□□ -1.94
PTPRR-204ENST00000440835 KRTAP6-3Q3LI67 103 aa2.9□□□□□ -1.94
PTPRR-204ENST00000440835 A0A0D9SG42 100 aa2.89□□□□□ -1.95
PTPRR-204ENST00000440835 S4R3F8 94 aa2.87□□□□□ -1.95
PTPRR-204ENST00000440835 PLAC4Q8WY50 150 aa2.85□□□□□ -1.95
PTPRR-204ENST00000440835 INE1O15225 51 aa2.84□□□□□ -1.95
PTPRR-204ENST00000440835 KRTAP12-2P59991 146 aa2.82□□□□□ -1.96
PTPRR-204ENST00000440835 MACF1Q9UPN3 7388 aaKnown RBP2.8□□□□□ -1.96
PTPRR-204ENST00000440835 KRTAP4-8Q9BYQ9 185 aa2.77□□□□□ -1.97
PTPRR-204ENST00000440835 KRTAP12-1P59990 96 aa2.77□□□□□ -1.97
PTPRR-204ENST00000440835 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
PTPRR-204ENST00000440835 LCE4AQ5TA78 99 aa2.74□□□□□ -1.97
PTPRR-204ENST00000440835 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
PTPRR-204ENST00000440835 KRTAP19-8Q3LI54 63 aa2.73□□□□□ -1.97
PTPRR-204ENST00000440835 NEBP20929 6669 aa2.73□□□□□ -1.97
PTPRR-204ENST00000440835 SPRR2GQ9BYE4 73 aa2.72□□□□□ -1.97
PTPRR-204ENST00000440835 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
PTPRR-204ENST00000440835 KRTAP5-9P26371 169 aa2.71□□□□□ -1.98
PTPRR-204ENST00000440835 KRTAP10-5P60370 271 aa2.7□□□□□ -1.98
PTPRR-204ENST00000440835 KRTAP4-7Q9BYR0 210 aa2.7□□□□□ -1.98
PTPRR-204ENST00000440835 MT1BP07438 61 aa2.69□□□□□ -1.98
PTPRR-204ENST00000440835 KRTAP4-8A0A0G2JLE6 195 aa2.68□□□□□ -1.98
PTPRR-204ENST00000440835 M0QZ58 72 aa2.68□□□□□ -1.98
PTPRR-204ENST00000440835 LCE3BQ5TA77 95 aa2.68□□□□□ -1.98
PTPRR-204ENST00000440835 KRTAP2-3P0C7H8 128 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms