RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 S4R3F8 94 aa7.11□□□□□ -1.27
LINC02048-201ENST00000440556 C9orf92A6NGG3 77 aa7.1□□□□□ -1.27
LINC02048-201ENST00000440556 PKHD1P08F94 4074 aa7.1□□□□□ -1.27
LINC02048-201ENST00000440556 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
LINC02048-201ENST00000440556 DYNC1H1Q14204 4646 aaKnown RBP7.09□□□□□ -1.28
LINC02048-201ENST00000440556 KRTAP17-1Q9BYP8 105 aa7.08□□□□□ -1.28
LINC02048-201ENST00000440556 EPPK1P58107 5090 aaKnown RBP7.06□□□□□ -1.28
LINC02048-201ENST00000440556 LRP1BQ9NZR2 4599 aa7.06□□□□□ -1.28
LINC02048-201ENST00000440556 KRTAP3-3Q9BYR6 98 aa7.05□□□□□ -1.28
LINC02048-201ENST00000440556 XP32Q5T750 250 aa7.04□□□□□ -1.28
LINC02048-201ENST00000440556 A0A1B0GVY2 172 aa7.03□□□□□ -1.28
LINC02048-201ENST00000440556 BIRC6Q9NR09 4857 aa6.98□□□□□ -1.29
LINC02048-201ENST00000440556 KRTAP12-2P59991 146 aa6.97□□□□□ -1.29
LINC02048-201ENST00000440556 APOBP04114 4563 aaKnown RBP6.96□□□□□ -1.3
LINC02048-201ENST00000440556 LUZP6Q538Z0 58 aa6.96□□□□□ -1.3
LINC02048-201ENST00000440556 KRTAP12-1P59990 96 aa6.95□□□□□ -1.3
LINC02048-201ENST00000440556 LCE2DQ5TA82 110 aaPredicted RBP6.93□□□□□ -1.3
LINC02048-201ENST00000440556 KIAA1109Q2LD37 5005 aa6.9□□□□□ -1.3
LINC02048-201ENST00000440556 M0QZ58 72 aa6.9□□□□□ -1.31
LINC02048-201ENST00000440556 FAT1Q14517 4588 aa6.89□□□□□ -1.31
LINC02048-201ENST00000440556 RYR1P21817 5038 aa6.89□□□□□ -1.31
LINC02048-201ENST00000440556 VPS13BQ7Z7G8 4022 aa6.87□□□□□ -1.31
LINC02048-201ENST00000440556 HSPG2P98160 4391 aa6.85□□□□□ -1.31
LINC02048-201ENST00000440556 SMR3BP02814 79 aaPredicted RBP6.82□□□□□ -1.32
LINC02048-201ENST00000440556 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
LINC02048-201ENST00000440556 PKHD1L1Q86WI1 4243 aa6.8□□□□□ -1.32
LINC02048-201ENST00000440556 KRTAP10-4P60372 401 aaPredicted RBP6.72□□□□□ -1.33
LINC02048-201ENST00000440556 DMBT1Q9UGM3 2413 aaPredicted RBP6.69□□□□□ -1.34
LINC02048-201ENST00000440556 HERC2O95714 4834 aa6.69□□□□□ -1.34
LINC02048-201ENST00000440556 KRTAP10-8P60410 259 aa6.67□□□□□ -1.34
LINC02048-201ENST00000440556 ABCA13Q86UQ4 5058 aa6.66□□□□□ -1.34
LINC02048-201ENST00000440556 KRTAP4-5Q9BYR2 181 aa6.65□□□□□ -1.34
LINC02048-201ENST00000440556 Q5VSD8 79 aa6.64□□□□□ -1.35
LINC02048-201ENST00000440556 PP632Q6XCG6 107 aa6.63□□□□□ -1.35
LINC02048-201ENST00000440556 LRP1Q07954 4544 aaKnown RBP6.62□□□□□ -1.35
LINC02048-201ENST00000440556 PCLOQ9Y6V0 5065 aa6.61□□□□□ -1.35
LINC02048-201ENST00000440556 MYCBP2O75592 4640 aa6.58□□□□□ -1.36
LINC02048-201ENST00000440556 FAT3Q8TDW7 4589 aa6.55□□□□□ -1.36
LINC02048-201ENST00000440556 SEC61BP60468 96 aaKnown RBP6.54□□□□□ -1.36
LINC02048-201ENST00000440556 TNXBP22105 4242 aa6.5□□□□□ -1.37
LINC02048-201ENST00000440556 R4GN34 69 aa6.49□□□□□ -1.37
LINC02048-201ENST00000440556 J3QL48 77 aa6.4□□□□□ -1.38
LINC02048-201ENST00000440556 MT1HL1P0DM35 61 aa6.39□□□□□ -1.39
LINC02048-201ENST00000440556 CAMK2N1Q7Z7J9 78 aa6.36□□□□□ -1.39
LINC02048-201ENST00000440556 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
LINC02048-201ENST00000440556 HERC1Q15751 4861 aa6.3□□□□□ -1.4
LINC02048-201ENST00000440556 SPRR5A0A1B0GTR4 108 aa6.3□□□□□ -1.4
LINC02048-201ENST00000440556 PRO2289Q9P1D8 64 aa6.23□□□□□ -1.41
LINC02048-201ENST00000440556 LPAP08519 4548 aa6.17□□□□□ -1.42
LINC02048-201ENST00000440556 HMCN2Q8NDA2 5059 aa6.15□□□□□ -1.43
LINC02048-201ENST00000440556 TNP1P09430 55 aa6.13□□□□□ -1.43
LINC02048-201ENST00000440556 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
LINC02048-201ENST00000440556 INE1O15225 51 aa6.11□□□□□ -1.43
LINC02048-201ENST00000440556 UBR4Q5T4S7 5183 aa6.1□□□□□ -1.43
LINC02048-201ENST00000440556 LRP2P98164 4655 aa6.08□□□□□ -1.44
LINC02048-201ENST00000440556 MUC2Q02817 5179 aa5.86□□□□□ -1.47
LINC02048-201ENST00000440556 LCE2BO14633 110 aa5.86□□□□□ -1.47
LINC02048-201ENST00000440556 RNF213Q63HN8 5207 aa5.85□□□□□ -1.47
LINC02048-201ENST00000440556 MUC17Q685J3 4493 aa5.85□□□□□ -1.47
LINC02048-201ENST00000440556 KRTAP4-1Q9BYQ7 146 aa5.81□□□□□ -1.48
LINC02048-201ENST00000440556 FLGP20930 4061 aaPredicted RBP5.81□□□□□ -1.48
LINC02048-201ENST00000440556 KRTAP19-2Q3LHN2 52 aa5.75□□□□□ -1.49
LINC02048-201ENST00000440556 LCE2CQ5TA81 110 aa5.66□□□□□ -1.5
LINC02048-201ENST00000440556 FAT4Q6V0I7 4981 aa5.64□□□□□ -1.51
LINC02048-201ENST00000440556 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
LINC02048-201ENST00000440556 KRTAP9-2Q9BYQ4 174 aa5.62□□□□□ -1.51
LINC02048-201ENST00000440556 KRTAP9-6A0A140TA67 174 aa5.61□□□□□ -1.51
LINC02048-201ENST00000440556 KRTAP8-1Q8IUC2 63 aa5.59□□□□□ -1.51
LINC02048-201ENST00000440556 LCE2AQ5TA79 106 aaPredicted RBP5.57□□□□□ -1.52
LINC02048-201ENST00000440556 SPRR2GQ9BYE4 73 aa5.55□□□□□ -1.52
LINC02048-201ENST00000440556 MT1HP80294 61 aa5.4□□□□□ -1.54
LINC02048-201ENST00000440556 KRTAP19-1Q8IUB9 90 aa5.39□□□□□ -1.55
LINC02048-201ENST00000440556 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
LINC02048-201ENST00000440556 KRTAP10-12P60413 245 aa5.37□□□□□ -1.55
LINC02048-201ENST00000440556 M0R2T5 61 aa5.32□□□□□ -1.56
LINC02048-201ENST00000440556 KRTAP10-10P60014 251 aa5.3□□□□□ -1.56
LINC02048-201ENST00000440556 CRCT1Q9UGL9 99 aa5.24□□□□□ -1.57
LINC02048-201ENST00000440556 KRTAP10-5P60370 271 aa5.23□□□□□ -1.57
LINC02048-201ENST00000440556 KRTAP19-8Q3LI54 63 aa5.23□□□□□ -1.57
LINC02048-201ENST00000440556 KRTAP9-8Q9BYQ0 159 aa5.19□□□□□ -1.58
LINC02048-201ENST00000440556 MT2AP02795 61 aa5.16□□□□□ -1.58
LINC02048-201ENST00000440556 MT1FP04733 61 aa5.14□□□□□ -1.59
LINC02048-201ENST00000440556 MT1XP80297 61 aa5.14□□□□□ -1.59
LINC02048-201ENST00000440556 LCE3CQ5T5A8 94 aa5.12□□□□□ -1.59
LINC02048-201ENST00000440556 FSIP2Q5CZC0 6907 aa5.11□□□□□ -1.59
LINC02048-201ENST00000440556 MT1BP07438 61 aa5.04□□□□□ -1.6
LINC02048-201ENST00000440556 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
LINC02048-201ENST00000440556 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
LINC02048-201ENST00000440556 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
LINC02048-201ENST00000440556 KRTAP9-3Q9BYQ3 159 aa5□□□□□ -1.61
LINC02048-201ENST00000440556 KRTAP9-7A8MTY7 169 aa4.99□□□□□ -1.61
LINC02048-201ENST00000440556 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
LINC02048-201ENST00000440556 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
LINC02048-201ENST00000440556 USH2AO75445 5202 aa4.95□□□□□ -1.62
LINC02048-201ENST00000440556 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
LINC02048-201ENST00000440556 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
LINC02048-201ENST00000440556 SSPOA2VEC9 5147 aa4.84□□□□□ -1.63
LINC02048-201ENST00000440556 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
LINC02048-201ENST00000440556 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
LINC02048-201ENST00000440556 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms