RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 SVIPQ8NHG7 77 aa7.53□□□□□ -1.2
ITGB1-207ENST00000439974 K7ERU9 68 aa7.52□□□□□ -1.21
ITGB1-207ENST00000439974 LINC00208Q96KT6 92 aa7.52□□□□□ -1.21
ITGB1-207ENST00000439974 LCA10Q71F78 164 aa7.5□□□□□ -1.21
ITGB1-207ENST00000439974 SCGB1A1P11684 91 aa7.49□□□□□ -1.21
ITGB1-207ENST00000439974 KLKP1Q107X0 134 aa7.49□□□□□ -1.21
ITGB1-207ENST00000439974 MP68P56378 58 aa7.46□□□□□ -1.22
ITGB1-207ENST00000439974 CSAG1Q6PB30 78 aa7.42□□□□□ -1.22
ITGB1-207ENST00000439974 IMUPQ9GZP8 106 aa7.4□□□□□ -1.22
ITGB1-207ENST00000439974 FAM236AA0A1B0GUQ0 79 aa7.39□□□□□ -1.23
ITGB1-207ENST00000439974 FAM236BA0A1B0GV22 79 aa7.39□□□□□ -1.23
ITGB1-207ENST00000439974 KRTAP6-3Q3LI67 103 aa7.37□□□□□ -1.23
ITGB1-207ENST00000439974 H3BPC8 53 aa7.33□□□□□ -1.24
ITGB1-207ENST00000439974 NEBP20929 6669 aa7.31□□□□□ -1.24
ITGB1-207ENST00000439974 TRAV7A0A075B6U4 112 aa7.29□□□□□ -1.24
ITGB1-207ENST00000439974 A8MUN3 132 aa7.28□□□□□ -1.24
ITGB1-207ENST00000439974 NDUFC1O43677 76 aa7.27□□□□□ -1.25
ITGB1-207ENST00000439974 SMIM20Q8N5G0 67 aa7.24□□□□□ -1.25
ITGB1-207ENST00000439974 MUC12Q9UKN1 5478 aa7.23□□□□□ -1.25
ITGB1-207ENST00000439974 A6NN06 94 aa7.22□□□□□ -1.25
ITGB1-207ENST00000439974 MT1BP07438 61 aa7.21□□□□□ -1.26
ITGB1-207ENST00000439974 Q5VV11 94 aa7.21□□□□□ -1.26
ITGB1-207ENST00000439974 DMAC1Q96GE9 116 aa7.21□□□□□ -1.26
ITGB1-207ENST00000439974 SNURFQ9Y675 71 aa7.2□□□□□ -1.26
ITGB1-207ENST00000439974 SPRR2GQ9BYE4 73 aa7.19□□□□□ -1.26
ITGB1-207ENST00000439974 KRTAP19-8Q3LI54 63 aa7.18□□□□□ -1.26
ITGB1-207ENST00000439974 ADM2Q7Z4H4 148 aa7.14□□□□□ -1.27
ITGB1-207ENST00000439974 C20orf197Q8N268 126 aa7.12□□□□□ -1.27
ITGB1-207ENST00000439974 PCP4P48539 62 aa7.11□□□□□ -1.27
ITGB1-207ENST00000439974 SERP2Q8N6R1 65 aa7.11□□□□□ -1.27
ITGB1-207ENST00000439974 H0YAA0 97 aa7.09□□□□□ -1.27
ITGB1-207ENST00000439974 KRTAP10-5P60370 271 aa7.09□□□□□ -1.27
ITGB1-207ENST00000439974 ACYP2P14621 99 aa7.05□□□□□ -1.28
ITGB1-207ENST00000439974 P0C880 135 aa7.03□□□□□ -1.28
ITGB1-207ENST00000439974 CRIPTQ9P021 101 aa7.03□□□□□ -1.28
ITGB1-207ENST00000439974 CHKB-CPT1BH3BT56 60 aa6.97□□□□□ -1.29
ITGB1-207ENST00000439974 KMT2DO14686 5537 aa6.97□□□□□ -1.29
ITGB1-207ENST00000439974 MDN1Q9NU22 5596 aa6.97□□□□□ -1.29
ITGB1-207ENST00000439974 COX7CP15954 63 aa6.96□□□□□ -1.3
ITGB1-207ENST00000439974 KRTAP5-9P26371 169 aa6.95□□□□□ -1.3
ITGB1-207ENST00000439974 SPANXA2-OT1Q8N9U9 137 aa6.95□□□□□ -1.3
ITGB1-207ENST00000439974 CYSTM1Q9H1C7 97 aa6.92□□□□□ -1.3
ITGB1-207ENST00000439974 KRTAP20-1Q3LI63 56 aa6.91□□□□□ -1.3
ITGB1-207ENST00000439974 SPTSSBQ8NFR3 76 aa6.9□□□□□ -1.3
ITGB1-207ENST00000439974 R4GN34 69 aa6.9□□□□□ -1.3
ITGB1-207ENST00000439974 M0QZ58 72 aa6.89□□□□□ -1.31
ITGB1-207ENST00000439974 ANAPC13Q9BS18 74 aa6.84□□□□□ -1.31
ITGB1-207ENST00000439974 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
ITGB1-207ENST00000439974 COA5Q86WW8 74 aa6.83□□□□□ -1.32
ITGB1-207ENST00000439974 H7BZZ5 65 aa6.82□□□□□ -1.32
ITGB1-207ENST00000439974 LOC100996750A0A140TA64 210 aa6.8□□□□□ -1.32
ITGB1-207ENST00000439974 KRTAP4-6Q9BYQ5 205 aa6.8□□□□□ -1.32
ITGB1-207ENST00000439974 PRO2289Q9P1D8 64 aa6.77□□□□□ -1.33
ITGB1-207ENST00000439974 CCDC179H3BU77 68 aa6.76□□□□□ -1.33
ITGB1-207ENST00000439974 PLAC4Q8WY50 150 aa6.76□□□□□ -1.33
ITGB1-207ENST00000439974 MT1XP80297 61 aa6.72□□□□□ -1.33
ITGB1-207ENST00000439974 SPRR2FQ96RM1 72 aa6.71□□□□□ -1.34
ITGB1-207ENST00000439974 KRTAP2-3P0C7H8 128 aa6.68□□□□□ -1.34
ITGB1-207ENST00000439974 KRTAP2-4Q9BYR9 128 aa6.68□□□□□ -1.34
ITGB1-207ENST00000439974 KRTAP13-4Q3LI77 160 aa6.67□□□□□ -1.34
ITGB1-207ENST00000439974 SPRR2EP22531 72 aa6.66□□□□□ -1.34
ITGB1-207ENST00000439974 SPRR2BP35325 72 aa6.66□□□□□ -1.34
ITGB1-207ENST00000439974 SPRR2AP35326 72 aa6.66□□□□□ -1.34
ITGB1-207ENST00000439974 KRTAP8-1Q8IUC2 63 aa6.63□□□□□ -1.35
ITGB1-207ENST00000439974 KRTAP12-2P59991 146 aa6.61□□□□□ -1.35
ITGB1-207ENST00000439974 SEC61GP60059 68 aa6.57□□□□□ -1.36
ITGB1-207ENST00000439974 SERP1Q9Y6X1 66 aa6.57□□□□□ -1.36
ITGB1-207ENST00000439974 LCE1AQ5T7P2 110 aa6.53□□□□□ -1.36
ITGB1-207ENST00000439974 SPATA8Q6RVD6 105 aa6.51□□□□□ -1.37
ITGB1-207ENST00000439974 A0A0D9SG42 100 aa6.5□□□□□ -1.37
ITGB1-207ENST00000439974 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
ITGB1-207ENST00000439974 A0A1B0GU33 70 aa6.48□□□□□ -1.37
ITGB1-207ENST00000439974 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
ITGB1-207ENST00000439974 ATP5EP56381 51 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-207ENST00000439974 KRTAP2-2Q9BYT5 123 aa6.46□□□□□ -1.38
ITGB1-207ENST00000439974 KRTAP2-1Q9BYU5 128 aa6.46□□□□□ -1.38
ITGB1-207ENST00000439974 A0A1B0GU69 56 aa6.45□□□□□ -1.38
ITGB1-207ENST00000439974 SPRR2DP22532 72 aa6.44□□□□□ -1.38
ITGB1-207ENST00000439974 KRTAP10-7P60409 375 aaPredicted RBP6.43□□□□□ -1.38
ITGB1-207ENST00000439974 TMEM258P61165 79 aa6.41□□□□□ -1.38
ITGB1-207ENST00000439974 KRTAP10-12P60413 245 aa6.39□□□□□ -1.39
ITGB1-207ENST00000439974 CAMK2N1Q7Z7J9 78 aa6.39□□□□□ -1.39
ITGB1-207ENST00000439974 SPINT4Q6UDR6 99 aa6.36□□□□□ -1.39
ITGB1-207ENST00000439974 A8MU10 97 aa6.33□□□□□ -1.4
ITGB1-207ENST00000439974 KRTAP12-1P59990 96 aa6.31□□□□□ -1.4
ITGB1-207ENST00000439974 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
ITGB1-207ENST00000439974 LCE3BQ5TA77 95 aa6.27□□□□□ -1.41
ITGB1-207ENST00000439974 PRR15LQ9BU68 103 aa6.26□□□□□ -1.41
ITGB1-207ENST00000439974 SMIM26A0A096LP01 95 aa6.25□□□□□ -1.41
ITGB1-207ENST00000439974 KRTAP4-12Q9BQ66 201 aa6.14□□□□□ -1.43
ITGB1-207ENST00000439974 UQCR11O14957 56 aa6.08□□□□□ -1.44
ITGB1-207ENST00000439974 DSTQ03001 7570 aaKnown RBP6.06□□□□□ -1.44
ITGB1-207ENST00000439974 PSPHP1O15172 72 aa6.06□□□□□ -1.44
ITGB1-207ENST00000439974 C10orf95Q9H7T3 257 aa6.04□□□□□ -1.44
ITGB1-207ENST00000439974 GPR98Q8WXG9 6306 aa6.04□□□□□ -1.44
ITGB1-207ENST00000439974 KRTAP19-7Q3SYF9 63 aa6.01□□□□□ -1.45
ITGB1-207ENST00000439974 MIR22HGQ0VDD5 57 aa6□□□□□ -1.45
ITGB1-207ENST00000439974 LCE5AQ5TCM9 118 aa6□□□□□ -1.45
ITGB1-207ENST00000439974 Q1T7F1 81 aa5.99□□□□□ -1.45
ITGB1-207ENST00000439974 RPS28P62857 69 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms