RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 SEC61BP60468 96 aaKnown RBP5.96□□□□□ -1.46
SMAD3-202ENST00000439724 HERC2O95714 4834 aa5.95□□□□□ -1.46
SMAD3-202ENST00000439724 S4R3F8 94 aa5.94□□□□□ -1.46
SMAD3-202ENST00000439724 H1FX-AS1Q4G0G2 97 aa5.93□□□□□ -1.46
SMAD3-202ENST00000439724 KRTAP3-3Q9BYR6 98 aa5.93□□□□□ -1.46
SMAD3-202ENST00000439724 ABCA13Q86UQ4 5058 aa5.92□□□□□ -1.46
SMAD3-202ENST00000439724 UQCR11O14957 56 aa5.92□□□□□ -1.46
SMAD3-202ENST00000439724 RBM12B-AS1Q9P1G2 102 aa5.92□□□□□ -1.46
SMAD3-202ENST00000439724 SPATA8Q6RVD6 105 aa5.9□□□□□ -1.46
SMAD3-202ENST00000439724 MIR22HGQ0VDD5 57 aa5.88□□□□□ -1.47
SMAD3-202ENST00000439724 LRP2P98164 4655 aa5.85□□□□□ -1.47
SMAD3-202ENST00000439724 LPAP08519 4548 aa5.83□□□□□ -1.48
SMAD3-202ENST00000439724 A0A1B0GU33 70 aa5.82□□□□□ -1.48
SMAD3-202ENST00000439724 KRTAP4-1Q9BYQ7 146 aa5.82□□□□□ -1.48
SMAD3-202ENST00000439724 PMAIP1Q13794 54 aa5.8□□□□□ -1.48
SMAD3-202ENST00000439724 KRTAP10-6P60371 365 aaPredicted RBP5.79□□□□□ -1.48
SMAD3-202ENST00000439724 H0YAA0 97 aa5.78□□□□□ -1.48
SMAD3-202ENST00000439724 KRTAP3-2Q9BYR7 98 aa5.78□□□□□ -1.48
SMAD3-202ENST00000439724 A6NN06 94 aa5.77□□□□□ -1.49
SMAD3-202ENST00000439724 CSAG1Q6PB30 78 aa5.77□□□□□ -1.49
SMAD3-202ENST00000439724 PCLOQ9Y6V0 5065 aa5.73□□□□□ -1.49
SMAD3-202ENST00000439724 MUC17Q685J3 4493 aa5.72□□□□□ -1.49
SMAD3-202ENST00000439724 KRTAP19-2Q3LHN2 52 aa5.72□□□□□ -1.49
SMAD3-202ENST00000439724 P0C880 135 aa5.69□□□□□ -1.5
SMAD3-202ENST00000439724 ADM2Q7Z4H4 148 aa5.69□□□□□ -1.5
SMAD3-202ENST00000439724 KRTAP13-4Q3LI77 160 aa5.64□□□□□ -1.51
SMAD3-202ENST00000439724 KTN1-AS1Q86SY8 53 aa5.64□□□□□ -1.51
SMAD3-202ENST00000439724 M0QZ58 72 aa5.58□□□□□ -1.52
SMAD3-202ENST00000439724 K7ERS5 55 aa5.56□□□□□ -1.52
SMAD3-202ENST00000439724 HERC1Q15751 4861 aa5.55□□□□□ -1.52
SMAD3-202ENST00000439724 HMCN2Q8NDA2 5059 aa5.55□□□□□ -1.52
SMAD3-202ENST00000439724 A0A0D9SG42 100 aa5.53□□□□□ -1.52
SMAD3-202ENST00000439724 LCE2CQ5TA81 110 aa5.49□□□□□ -1.53
SMAD3-202ENST00000439724 R4GN34 69 aa5.46□□□□□ -1.54
SMAD3-202ENST00000439724 KRTAP12-1P59990 96 aa5.45□□□□□ -1.54
SMAD3-202ENST00000439724 FLGP20930 4061 aaPredicted RBP5.45□□□□□ -1.54
SMAD3-202ENST00000439724 LORP23490 312 aaPredicted RBP5.43□□□□□ -1.54
SMAD3-202ENST00000439724 KRTAP12-2P59991 146 aa5.43□□□□□ -1.54
SMAD3-202ENST00000439724 PRAC1Q96KF2 57 aa5.42□□□□□ -1.54
SMAD3-202ENST00000439724 SPINT4Q6UDR6 99 aa5.39□□□□□ -1.55
SMAD3-202ENST00000439724 ROMO1P60602 79 aa5.38□□□□□ -1.55
SMAD3-202ENST00000439724 MT1HP80294 61 aa5.37□□□□□ -1.55
SMAD3-202ENST00000439724 LCE2DQ5TA82 110 aaPredicted RBP5.37□□□□□ -1.55
SMAD3-202ENST00000439724 CRIPTQ9P021 101 aa5.37□□□□□ -1.55
SMAD3-202ENST00000439724 LINC01554Q52M75 96 aa5.36□□□□□ -1.55
SMAD3-202ENST00000439724 MUC2Q02817 5179 aa5.32□□□□□ -1.56
SMAD3-202ENST00000439724 M0R2T5 61 aa5.3□□□□□ -1.56
SMAD3-202ENST00000439724 RNF213Q63HN8 5207 aa5.27□□□□□ -1.57
SMAD3-202ENST00000439724 KRTAP25-1Q3LHN0 102 aa5.26□□□□□ -1.57
SMAD3-202ENST00000439724 UBR4Q5T4S7 5183 aa5.22□□□□□ -1.57
SMAD3-202ENST00000439724 SPRR2GQ9BYE4 73 aa5.21□□□□□ -1.58
SMAD3-202ENST00000439724 MT2AP02795 61 aa5.2□□□□□ -1.58
SMAD3-202ENST00000439724 KRTAP9-8Q9BYQ0 159 aa5.19□□□□□ -1.58
SMAD3-202ENST00000439724 MT1FP04733 61 aa5.18□□□□□ -1.58
SMAD3-202ENST00000439724 KRTAP19-1Q8IUB9 90 aa5.17□□□□□ -1.58
SMAD3-202ENST00000439724 KRTAP10-10P60014 251 aa5.15□□□□□ -1.58
SMAD3-202ENST00000439724 CAMK2N1Q7Z7J9 78 aa5.14□□□□□ -1.59
SMAD3-202ENST00000439724 C10orf95Q9H7T3 257 aa5.14□□□□□ -1.59
SMAD3-202ENST00000439724 FAT4Q6V0I7 4981 aa5.12□□□□□ -1.59
SMAD3-202ENST00000439724 PLAC4Q8WY50 150 aa5.06□□□□□ -1.6
SMAD3-202ENST00000439724 KRTAP19-8Q3LI54 63 aa5.05□□□□□ -1.6
SMAD3-202ENST00000439724 LCE2AQ5TA79 106 aaPredicted RBP5.01□□□□□ -1.61
SMAD3-202ENST00000439724 KRTAP9-3Q9BYQ3 159 aa5□□□□□ -1.61
SMAD3-202ENST00000439724 MT1BP07438 61 aa4.96□□□□□ -1.62
SMAD3-202ENST00000439724 TNP1P09430 55 aa4.94□□□□□ -1.62
SMAD3-202ENST00000439724 PP632Q6XCG6 107 aa4.92□□□□□ -1.62
SMAD3-202ENST00000439724 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
SMAD3-202ENST00000439724 MT1XP80297 61 aa4.84□□□□□ -1.63
SMAD3-202ENST00000439724 KRTAP10-5P60370 271 aa4.83□□□□□ -1.64
SMAD3-202ENST00000439724 LCE2BO14633 110 aa4.82□□□□□ -1.64
SMAD3-202ENST00000439724 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
SMAD3-202ENST00000439724 KRTAP15-1Q3LI76 137 aa4.72□□□□□ -1.65
SMAD3-202ENST00000439724 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
SMAD3-202ENST00000439724 KRTAP10-12P60413 245 aa4.65□□□□□ -1.67
SMAD3-202ENST00000439724 KRTAP10-7P60409 375 aaPredicted RBP4.64□□□□□ -1.67
SMAD3-202ENST00000439724 KRTAP8-1Q8IUC2 63 aa4.63□□□□□ -1.67
SMAD3-202ENST00000439724 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
SMAD3-202ENST00000439724 USH2AO75445 5202 aa4.5□□□□□ -1.69
SMAD3-202ENST00000439724 KRTAP19-6Q3LI70 58 aa4.49□□□□□ -1.69
SMAD3-202ENST00000439724 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.69
SMAD3-202ENST00000439724 KRTAP9-2Q9BYQ4 174 aa4.42□□□□□ -1.7
SMAD3-202ENST00000439724 NDUFAF8A1L188 74 aa4.41□□□□□ -1.7
SMAD3-202ENST00000439724 KRTAP4-8A0A0G2JLE6 195 aa4.41□□□□□ -1.7
SMAD3-202ENST00000439724 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
SMAD3-202ENST00000439724 KRTAP4-8Q9BYQ9 185 aa4.41□□□□□ -1.7
SMAD3-202ENST00000439724 SSPOA2VEC9 5147 aa4.37□□□□□ -1.71
SMAD3-202ENST00000439724 KRTAP9-6A0A140TA67 174 aa4.36□□□□□ -1.71
SMAD3-202ENST00000439724 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
SMAD3-202ENST00000439724 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
SMAD3-202ENST00000439724 LOC100996750A0A140TA64 210 aa4.28□□□□□ -1.72
SMAD3-202ENST00000439724 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
SMAD3-202ENST00000439724 FSIP2Q5CZC0 6907 aa4.24□□□□□ -1.73
SMAD3-202ENST00000439724 MT1EP04732 61 aa4.22□□□□□ -1.73
SMAD3-202ENST00000439724 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
SMAD3-202ENST00000439724 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
SMAD3-202ENST00000439724 H3BS24 57 aa4.19□□□□□ -1.74
SMAD3-202ENST00000439724 MT1LQ93083 61 aa4.17□□□□□ -1.74
SMAD3-202ENST00000439724 KMT2DO14686 5537 aa4.17□□□□□ -1.74
SMAD3-202ENST00000439724 CRCT1Q9UGL9 99 aa4.16□□□□□ -1.74
SMAD3-202ENST00000439724 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms