RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 FAM240AA0A1B0GVK7 77 aa8.94□□□□□ -0.98
NCKIPSD-206ENST00000439518 ATP5EP2Q5VTU8 51 aa8.94□□□□□ -0.98
NCKIPSD-206ENST00000439518 CRIPTQ9P021 101 aa8.93□□□□□ -0.98
NCKIPSD-206ENST00000439518 UQCRQO14949 82 aa8.92□□□□□ -0.98
NCKIPSD-206ENST00000439518 HIST1H4AP62805 103 aaKnown RBP8.89□□□□□ -0.99
NCKIPSD-206ENST00000439518 H0Y9P7 68 aa8.88□□□□□ -0.99
NCKIPSD-206ENST00000439518 IMUPQ9GZP8 106 aa8.88□□□□□ -0.99
NCKIPSD-206ENST00000439518 ATOX1O00244 68 aa8.87□□□□□ -0.99
NCKIPSD-206ENST00000439518 NEBP20929 6669 aa8.84□□□□□ -0.99
NCKIPSD-206ENST00000439518 H0YAA0 97 aa8.84□□□□□ -0.99
NCKIPSD-206ENST00000439518 NDUFC1O43677 76 aa8.83□□□□□ -1
NCKIPSD-206ENST00000439518 MUC12Q9UKN1 5478 aa8.77□□□□□ -1.01
NCKIPSD-206ENST00000439518 A8MUN3 132 aa8.77□□□□□ -1.01
NCKIPSD-206ENST00000439518 LINC00643Q86TS7 51 aa8.76□□□□□ -1.01
NCKIPSD-206ENST00000439518 KRTAP5-9P26371 169 aa8.73□□□□□ -1.01
NCKIPSD-206ENST00000439518 LINC00208Q96KT6 92 aa8.73□□□□□ -1.01
NCKIPSD-206ENST00000439518 ADM2Q7Z4H4 148 aa8.71□□□□□ -1.02
NCKIPSD-206ENST00000439518 OCR1Q9BZK8 76 aa8.69□□□□□ -1.02
NCKIPSD-206ENST00000439518 KMT2DO14686 5537 aa8.66□□□□□ -1.02
NCKIPSD-206ENST00000439518 MP68P56378 58 aa8.64□□□□□ -1.03
NCKIPSD-206ENST00000439518 MDN1Q9NU22 5596 aa8.58□□□□□ -1.04
NCKIPSD-206ENST00000439518 MT1XP80297 61 aa8.55□□□□□ -1.04
NCKIPSD-206ENST00000439518 KRTAP20-1Q3LI63 56 aa8.55□□□□□ -1.04
NCKIPSD-206ENST00000439518 PRO2289Q9P1D8 64 aa8.54□□□□□ -1.04
NCKIPSD-206ENST00000439518 A0A1B0GV90 55 aa8.52□□□□□ -1.05
NCKIPSD-206ENST00000439518 H3BPC8 53 aa8.52□□□□□ -1.05
NCKIPSD-206ENST00000439518 P0C880 135 aa8.51□□□□□ -1.05
NCKIPSD-206ENST00000439518 PLAC4Q8WY50 150 aa8.49□□□□□ -1.05
NCKIPSD-206ENST00000439518 DMAC1Q96GE9 116 aa8.49□□□□□ -1.05
NCKIPSD-206ENST00000439518 R4GN34 69 aa8.49□□□□□ -1.05
NCKIPSD-206ENST00000439518 C20orf197Q8N268 126 aa8.47□□□□□ -1.05
NCKIPSD-206ENST00000439518 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
NCKIPSD-206ENST00000439518 M0QZ58 72 aa8.41□□□□□ -1.06
NCKIPSD-206ENST00000439518 SPRR2FQ96RM1 72 aa8.4□□□□□ -1.06
NCKIPSD-206ENST00000439518 J3QR89 54 aa8.39□□□□□ -1.07
NCKIPSD-206ENST00000439518 SCGB1A1P11684 91 aa8.39□□□□□ -1.07
NCKIPSD-206ENST00000439518 KRTAP12-2P59991 146 aa8.37□□□□□ -1.07
NCKIPSD-206ENST00000439518 KRTAP8-1Q8IUC2 63 aa8.33□□□□□ -1.08
NCKIPSD-206ENST00000439518 KRTAP2-3P0C7H8 128 aa8.32□□□□□ -1.08
NCKIPSD-206ENST00000439518 KRTAP2-4Q9BYR9 128 aa8.32□□□□□ -1.08
NCKIPSD-206ENST00000439518 SPRR2EP22531 72 aa8.31□□□□□ -1.08
NCKIPSD-206ENST00000439518 SPRR2BP35325 72 aa8.31□□□□□ -1.08
NCKIPSD-206ENST00000439518 SPRR2AP35326 72 aa8.31□□□□□ -1.08
NCKIPSD-206ENST00000439518 TRAV7A0A075B6U4 112 aa8.3□□□□□ -1.08
NCKIPSD-206ENST00000439518 LINC01554Q52M75 96 aa8.29□□□□□ -1.08
NCKIPSD-206ENST00000439518 ACYP2P14621 99 aa8.23□□□□□ -1.09
NCKIPSD-206ENST00000439518 KRTAP4-8A0A0G2JLE6 195 aa8.22□□□□□ -1.09
NCKIPSD-206ENST00000439518 LCE1AQ5T7P2 110 aa8.22□□□□□ -1.09
NCKIPSD-206ENST00000439518 KRTAP4-8Q9BYQ9 185 aa8.22□□□□□ -1.09
NCKIPSD-206ENST00000439518 SPTSSBQ8NFR3 76 aa8.15□□□□□ -1.1
NCKIPSD-206ENST00000439518 MT-ATP8P03928 68 aa8.14□□□□□ -1.11
NCKIPSD-206ENST00000439518 KRTAP10-7P60409 375 aaPredicted RBP8.14□□□□□ -1.11
NCKIPSD-206ENST00000439518 SMIM20Q8N5G0 67 aa8.14□□□□□ -1.11
NCKIPSD-206ENST00000439518 KRTAP10-12P60413 245 aa8.12□□□□□ -1.11
NCKIPSD-206ENST00000439518 CHKB-CPT1BH3BT56 60 aa8.05□□□□□ -1.12
NCKIPSD-206ENST00000439518 KRTAP2-2Q9BYT5 123 aa8.04□□□□□ -1.12
NCKIPSD-206ENST00000439518 KRTAP2-1Q9BYU5 128 aa8.04□□□□□ -1.12
NCKIPSD-206ENST00000439518 SPRR2DP22532 72 aa8.03□□□□□ -1.12
NCKIPSD-206ENST00000439518 K7ERU9 68 aa8.02□□□□□ -1.13
NCKIPSD-206ENST00000439518 SNURFQ9Y675 71 aa8□□□□□ -1.13
NCKIPSD-206ENST00000439518 SPANXA2-OT1Q8N9U9 137 aa7.94□□□□□ -1.14
NCKIPSD-206ENST00000439518 KRTAP13-4Q3LI77 160 aa7.9□□□□□ -1.14
NCKIPSD-206ENST00000439518 LCE3BQ5TA77 95 aa7.83□□□□□ -1.16
NCKIPSD-206ENST00000439518 SERP2Q8N6R1 65 aa7.83□□□□□ -1.16
NCKIPSD-206ENST00000439518 CAMK2N1Q7Z7J9 78 aa7.78□□□□□ -1.16
NCKIPSD-206ENST00000439518 COA5Q86WW8 74 aa7.72□□□□□ -1.17
NCKIPSD-206ENST00000439518 KRTAP19-7Q3SYF9 63 aa7.65□□□□□ -1.18
NCKIPSD-206ENST00000439518 A0A0D9SG42 100 aa7.61□□□□□ -1.19
NCKIPSD-206ENST00000439518 SEC61GP60059 68 aa7.61□□□□□ -1.19
NCKIPSD-206ENST00000439518 LCE5AQ5TCM9 118 aa7.6□□□□□ -1.19
NCKIPSD-206ENST00000439518 SERP1Q9Y6X1 66 aa7.6□□□□□ -1.19
NCKIPSD-206ENST00000439518 MT1EP04732 61 aa7.58□□□□□ -1.2
NCKIPSD-206ENST00000439518 SPATA8Q6RVD6 105 aa7.57□□□□□ -1.2
NCKIPSD-206ENST00000439518 KRTAP19-3Q7Z4W3 81 aa7.54□□□□□ -1.2
NCKIPSD-206ENST00000439518 A0A1B0GU33 70 aa7.53□□□□□ -1.2
NCKIPSD-206ENST00000439518 COX7CP15954 63 aa7.53□□□□□ -1.2
NCKIPSD-206ENST00000439518 DSTQ03001 7570 aaKnown RBP7.52□□□□□ -1.21
NCKIPSD-206ENST00000439518 KRTAP12-1P59990 96 aa7.49□□□□□ -1.21
NCKIPSD-206ENST00000439518 SPINT4Q6UDR6 99 aa7.49□□□□□ -1.21
NCKIPSD-206ENST00000439518 H7BZZ5 65 aa7.48□□□□□ -1.21
NCKIPSD-206ENST00000439518 CYSTM1Q9H1C7 97 aa7.47□□□□□ -1.21
NCKIPSD-206ENST00000439518 KRTAP19-5Q3LI72 72 aa7.41□□□□□ -1.22
NCKIPSD-206ENST00000439518 MT1GP13640 62 aa7.34□□□□□ -1.23
NCKIPSD-206ENST00000439518 KRTAP4-9Q9BYQ8 210 aa7.32□□□□□ -1.24
NCKIPSD-206ENST00000439518 A0A1B0GU69 56 aa7.31□□□□□ -1.24
NCKIPSD-206ENST00000439518 SMIM26A0A096LP01 95 aa7.3□□□□□ -1.24
NCKIPSD-206ENST00000439518 GPR98Q8WXG9 6306 aa7.26□□□□□ -1.25
NCKIPSD-206ENST00000439518 A8MU10 97 aa7.26□□□□□ -1.25
NCKIPSD-206ENST00000439518 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
NCKIPSD-206ENST00000439518 MT1MQ8N339 61 aa7.23□□□□□ -1.25
NCKIPSD-206ENST00000439518 MT1LQ93083 61 aa7.23□□□□□ -1.25
NCKIPSD-206ENST00000439518 C10orf95Q9H7T3 257 aa7.17□□□□□ -1.26
NCKIPSD-206ENST00000439518 LCE1DQ5T752 114 aa7.16□□□□□ -1.26
NCKIPSD-206ENST00000439518 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
NCKIPSD-206ENST00000439518 ANAPC13Q9BS18 74 aa7.15□□□□□ -1.26
NCKIPSD-206ENST00000439518 TNP1P09430 55 aa7.14□□□□□ -1.27
NCKIPSD-206ENST00000439518 LCE4AQ5TA78 99 aa7.11□□□□□ -1.27
NCKIPSD-206ENST00000439518 KRTAP4-3Q9BYR4 195 aa7.07□□□□□ -1.28
NCKIPSD-206ENST00000439518 HMCN1Q96RW7 5635 aa7.05□□□□□ -1.28
NCKIPSD-206ENST00000439518 CCDC179H3BU77 68 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms