RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 SSPOA2VEC9 5147 aa4.79□□□□□ -1.64
MCF2L-216ENST00000439475 KRTAP19-6Q3LI70 58 aa4.79□□□□□ -1.64
MCF2L-216ENST00000439475 IMUPQ9GZP8 106 aa4.79□□□□□ -1.64
MCF2L-216ENST00000439475 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
MCF2L-216ENST00000439475 KRTAP3-3Q9BYR6 98 aa4.78□□□□□ -1.64
MCF2L-216ENST00000439475 K7ERU9 68 aa4.77□□□□□ -1.65
MCF2L-216ENST00000439475 KLKP1Q107X0 134 aa4.77□□□□□ -1.65
MCF2L-216ENST00000439475 CRIPTQ9P021 101 aa4.74□□□□□ -1.65
MCF2L-216ENST00000439475 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
MCF2L-216ENST00000439475 Q5VV11 94 aa4.72□□□□□ -1.65
MCF2L-216ENST00000439475 SPRR2GQ9BYE4 73 aa4.72□□□□□ -1.65
MCF2L-216ENST00000439475 H0YAA0 97 aa4.71□□□□□ -1.66
MCF2L-216ENST00000439475 SMIM20Q8N5G0 67 aa4.71□□□□□ -1.66
MCF2L-216ENST00000439475 FCGBPQ9Y6R7 5405 aaPredicted RBP4.69□□□□□ -1.66
MCF2L-216ENST00000439475 MT-ATP8P03928 68 aa4.67□□□□□ -1.66
MCF2L-216ENST00000439475 KRTAP19-8Q3LI54 63 aa4.67□□□□□ -1.66
MCF2L-216ENST00000439475 TRAV7A0A075B6U4 112 aa4.66□□□□□ -1.66
MCF2L-216ENST00000439475 ADM2Q7Z4H4 148 aa4.66□□□□□ -1.66
MCF2L-216ENST00000439475 DMAC1Q96GE9 116 aa4.65□□□□□ -1.67
MCF2L-216ENST00000439475 A6NN06 94 aa4.64□□□□□ -1.67
MCF2L-216ENST00000439475 MT1BP07438 61 aa4.64□□□□□ -1.67
MCF2L-216ENST00000439475 ACYP2P14621 99 aa4.63□□□□□ -1.67
MCF2L-216ENST00000439475 C20orf197Q8N268 126 aa4.62□□□□□ -1.67
MCF2L-216ENST00000439475 SPTSSBQ8NFR3 76 aa4.58□□□□□ -1.68
MCF2L-216ENST00000439475 R4GN34 69 aa4.56□□□□□ -1.68
MCF2L-216ENST00000439475 MACF1Q9UPN3 7388 aaKnown RBP4.56□□□□□ -1.68
MCF2L-216ENST00000439475 CHKB-CPT1BH3BT56 60 aa4.55□□□□□ -1.68
MCF2L-216ENST00000439475 KRTAP10-5P60370 271 aa4.55□□□□□ -1.68
MCF2L-216ENST00000439475 KRTAP6-3Q3LI67 103 aa4.53□□□□□ -1.68
MCF2L-216ENST00000439475 PLAC4Q8WY50 150 aa4.53□□□□□ -1.68
MCF2L-216ENST00000439475 SNURFQ9Y675 71 aa4.53□□□□□ -1.68
MCF2L-216ENST00000439475 SERP2Q8N6R1 65 aa4.52□□□□□ -1.69
MCF2L-216ENST00000439475 M0QZ58 72 aa4.51□□□□□ -1.69
MCF2L-216ENST00000439475 P0C880 135 aa4.51□□□□□ -1.69
MCF2L-216ENST00000439475 SPANXA2-OT1Q8N9U9 137 aa4.5□□□□□ -1.69
MCF2L-216ENST00000439475 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
MCF2L-216ENST00000439475 KRTAP3-2Q9BYR7 98 aa4.47□□□□□ -1.69
MCF2L-216ENST00000439475 SYNE2Q8WXH0 6885 aaKnown RBP4.47□□□□□ -1.69
MCF2L-216ENST00000439475 LINC01554Q52M75 96 aa4.44□□□□□ -1.7
MCF2L-216ENST00000439475 COX7CP15954 63 aa4.41□□□□□ -1.7
MCF2L-216ENST00000439475 MT1XP80297 61 aa4.36□□□□□ -1.71
MCF2L-216ENST00000439475 COA5Q86WW8 74 aa4.35□□□□□ -1.71
MCF2L-216ENST00000439475 SEC61GP60059 68 aa4.34□□□□□ -1.71
MCF2L-216ENST00000439475 SERP1Q9Y6X1 66 aa4.33□□□□□ -1.72
MCF2L-216ENST00000439475 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
MCF2L-216ENST00000439475 H7BZZ5 65 aa4.29□□□□□ -1.72
MCF2L-216ENST00000439475 KRTAP12-2P59991 146 aa4.29□□□□□ -1.72
MCF2L-216ENST00000439475 ANAPC13Q9BS18 74 aa4.28□□□□□ -1.72
MCF2L-216ENST00000439475 KRTAP8-1Q8IUC2 63 aa4.25□□□□□ -1.73
MCF2L-216ENST00000439475 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
MCF2L-216ENST00000439475 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
MCF2L-216ENST00000439475 KRTAP13-4Q3LI77 160 aa4.22□□□□□ -1.73
MCF2L-216ENST00000439475 CAMK2N1Q7Z7J9 78 aa4.22□□□□□ -1.73
MCF2L-216ENST00000439475 CYSTM1Q9H1C7 97 aa4.22□□□□□ -1.73
MCF2L-216ENST00000439475 A0A1B0GU33 70 aa4.21□□□□□ -1.74
MCF2L-216ENST00000439475 NEBP20929 6669 aa4.19□□□□□ -1.74
MCF2L-216ENST00000439475 A0A1B0GU69 56 aa4.18□□□□□ -1.74
MCF2L-216ENST00000439475 KMT2DO14686 5537 aa4.17□□□□□ -1.74
MCF2L-216ENST00000439475 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
MCF2L-216ENST00000439475 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
MCF2L-216ENST00000439475 A0A0D9SG42 100 aa4.16□□□□□ -1.74
MCF2L-216ENST00000439475 KRTAP4-8A0A0G2JLE6 195 aa4.16□□□□□ -1.74
MCF2L-216ENST00000439475 ATP5EP56381 51 aaPredicted RBP4.16□□□□□ -1.74
MCF2L-216ENST00000439475 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
MCF2L-216ENST00000439475 KRTAP4-8Q9BYQ9 185 aa4.16□□□□□ -1.74
MCF2L-216ENST00000439475 CCDC179H3BU77 68 aa4.15□□□□□ -1.75
MCF2L-216ENST00000439475 SPRR2EP22531 72 aa4.15□□□□□ -1.75
MCF2L-216ENST00000439475 SPRR2BP35325 72 aa4.15□□□□□ -1.75
MCF2L-216ENST00000439475 SPRR2AP35326 72 aa4.15□□□□□ -1.75
MCF2L-216ENST00000439475 SPATA8Q6RVD6 105 aa4.15□□□□□ -1.75
MCF2L-216ENST00000439475 SPINT4Q6UDR6 99 aa4.14□□□□□ -1.75
MCF2L-216ENST00000439475 SMIM26A0A096LP01 95 aa4.12□□□□□ -1.75
MCF2L-216ENST00000439475 PRR15LQ9BU68 103 aa4.1□□□□□ -1.75
MCF2L-216ENST00000439475 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
MCF2L-216ENST00000439475 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
MCF2L-216ENST00000439475 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
MCF2L-216ENST00000439475 KRTAP12-1P59990 96 aa4.05□□□□□ -1.76
MCF2L-216ENST00000439475 TMEM258P61165 79 aa4.05□□□□□ -1.76
MCF2L-216ENST00000439475 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
MCF2L-216ENST00000439475 LINC01558Q9Y6Z2 57 aa4.02□□□□□ -1.77
MCF2L-216ENST00000439475 SPRR2DP22532 72 aa4.01□□□□□ -1.77
MCF2L-216ENST00000439475 A8MU10 97 aa3.99□□□□□ -1.77
MCF2L-216ENST00000439475 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
MCF2L-216ENST00000439475 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
MCF2L-216ENST00000439475 UQCR11O14957 56 aa3.94□□□□□ -1.78
MCF2L-216ENST00000439475 TNP1P09430 55 aa3.93□□□□□ -1.78
MCF2L-216ENST00000439475 LCE3BQ5TA77 95 aa3.91□□□□□ -1.78
MCF2L-216ENST00000439475 KRTAP19-7Q3SYF9 63 aa3.9□□□□□ -1.79
MCF2L-216ENST00000439475 MT1EP04732 61 aa3.88□□□□□ -1.79
MCF2L-216ENST00000439475 V9GYY9 64 aa3.88□□□□□ -1.79
MCF2L-216ENST00000439475 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
MCF2L-216ENST00000439475 C10orf95Q9H7T3 257 aa3.86□□□□□ -1.79
MCF2L-216ENST00000439475 MIR22HGQ0VDD5 57 aa3.84□□□□□ -1.79
MCF2L-216ENST00000439475 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.79
MCF2L-216ENST00000439475 K7ERS5 55 aa3.83□□□□□ -1.8
MCF2L-216ENST00000439475 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
MCF2L-216ENST00000439475 PP632Q6XCG6 107 aa3.81□□□□□ -1.8
MCF2L-216ENST00000439475 MT1GP13640 62 aa3.8□□□□□ -1.8
MCF2L-216ENST00000439475 Q1T7F1 81 aa3.79□□□□□ -1.8
MCF2L-216ENST00000439475 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms