RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 C10orf95Q9H7T3 257 aa6.11□□□□□ -1.43
TRAPPC9-202ENST00000438773 FAT2Q9NYQ8 4349 aa6.11□□□□□ -1.43
TRAPPC9-202ENST00000438773 M0QZ58 72 aa6.08□□□□□ -1.44
TRAPPC9-202ENST00000438773 HYDINQ4G0P3 5121 aa6.08□□□□□ -1.44
TRAPPC9-202ENST00000438773 TPRXLQ17RH7 258 aa6.07□□□□□ -1.44
TRAPPC9-202ENST00000438773 H0YAA0 97 aa6.05□□□□□ -1.44
TRAPPC9-202ENST00000438773 PKD1P98161 4303 aa6.02□□□□□ -1.45
TRAPPC9-202ENST00000438773 KRTAP10-4P60372 401 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC9-202ENST00000438773 PKHD1P08F94 4074 aa5.98□□□□□ -1.45
TRAPPC9-202ENST00000438773 KRTAP3-1Q9BYR8 98 aa5.95□□□□□ -1.46
TRAPPC9-202ENST00000438773 FAT1Q14517 4588 aa5.92□□□□□ -1.46
TRAPPC9-202ENST00000438773 MT1HL1P0DM35 61 aa5.9□□□□□ -1.47
TRAPPC9-202ENST00000438773 P0C880 135 aa5.86□□□□□ -1.47
TRAPPC9-202ENST00000438773 KRTAP4-5Q9BYR2 181 aa5.85□□□□□ -1.47
TRAPPC9-202ENST00000438773 A0A0A0MQY5 61 aa5.83□□□□□ -1.48
TRAPPC9-202ENST00000438773 SACSQ9NZJ4 4579 aa5.82□□□□□ -1.48
TRAPPC9-202ENST00000438773 DYNC1H1Q14204 4646 aaKnown RBP5.79□□□□□ -1.48
TRAPPC9-202ENST00000438773 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
TRAPPC9-202ENST00000438773 MYCBP2O75592 4640 aa5.73□□□□□ -1.49
TRAPPC9-202ENST00000438773 KRTAP13-4Q3LI77 160 aa5.72□□□□□ -1.49
TRAPPC9-202ENST00000438773 LRP1Q07954 4544 aaKnown RBP5.71□□□□□ -1.5
TRAPPC9-202ENST00000438773 PKHD1L1Q86WI1 4243 aa5.69□□□□□ -1.5
TRAPPC9-202ENST00000438773 APOBP04114 4563 aaKnown RBP5.68□□□□□ -1.5
TRAPPC9-202ENST00000438773 KRTAP10-10P60014 251 aa5.68□□□□□ -1.5
TRAPPC9-202ENST00000438773 KRTAP10-6P60371 365 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC9-202ENST00000438773 HSPG2P98160 4391 aa5.67□□□□□ -1.5
TRAPPC9-202ENST00000438773 KRTAP3-3Q9BYR6 98 aa5.66□□□□□ -1.5
TRAPPC9-202ENST00000438773 KRTAP12-2P59991 146 aa5.65□□□□□ -1.51
TRAPPC9-202ENST00000438773 RYR2Q92736 4967 aa5.64□□□□□ -1.51
TRAPPC9-202ENST00000438773 KIAA1109Q2LD37 5005 aa5.63□□□□□ -1.51
TRAPPC9-202ENST00000438773 FAT3Q8TDW7 4589 aa5.61□□□□□ -1.51
TRAPPC9-202ENST00000438773 KRTAP3-2Q9BYR7 98 aa5.61□□□□□ -1.51
TRAPPC9-202ENST00000438773 KMT2CQ8NEZ4 4911 aaKnown RBP5.58□□□□□ -1.52
TRAPPC9-202ENST00000438773 RYR1P21817 5038 aa5.58□□□□□ -1.52
TRAPPC9-202ENST00000438773 LPAP08519 4548 aa5.57□□□□□ -1.52
TRAPPC9-202ENST00000438773 RYR3Q15413 4870 aa5.54□□□□□ -1.52
TRAPPC9-202ENST00000438773 TNXBP22105 4242 aa5.52□□□□□ -1.53
TRAPPC9-202ENST00000438773 TNP1P09430 55 aa5.5□□□□□ -1.53
TRAPPC9-202ENST00000438773 KRTAP12-1P59990 96 aa5.5□□□□□ -1.53
TRAPPC9-202ENST00000438773 KRTAP17-1Q9BYP8 105 aa5.48□□□□□ -1.53
TRAPPC9-202ENST00000438773 LRP2P98164 4655 aa5.44□□□□□ -1.54
TRAPPC9-202ENST00000438773 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
TRAPPC9-202ENST00000438773 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
TRAPPC9-202ENST00000438773 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
TRAPPC9-202ENST00000438773 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
TRAPPC9-202ENST00000438773 BIRC6Q9NR09 4857 aa5.27□□□□□ -1.57
TRAPPC9-202ENST00000438773 EPPK1P58107 5090 aaKnown RBP5.26□□□□□ -1.57
TRAPPC9-202ENST00000438773 ABCA13Q86UQ4 5058 aa5.24□□□□□ -1.57
TRAPPC9-202ENST00000438773 HERC2O95714 4834 aa5.23□□□□□ -1.57
TRAPPC9-202ENST00000438773 LORP23490 312 aaPredicted RBP5.21□□□□□ -1.58
TRAPPC9-202ENST00000438773 MUC2Q02817 5179 aa5.08□□□□□ -1.6
TRAPPC9-202ENST00000438773 MUC17Q685J3 4493 aa5.04□□□□□ -1.6
TRAPPC9-202ENST00000438773 MT1HP80294 61 aa5.01□□□□□ -1.61
TRAPPC9-202ENST00000438773 MT2AP02795 61 aa4.91□□□□□ -1.62
TRAPPC9-202ENST00000438773 PCLOQ9Y6V0 5065 aa4.88□□□□□ -1.63
TRAPPC9-202ENST00000438773 MT1FP04733 61 aa4.86□□□□□ -1.63
TRAPPC9-202ENST00000438773 KRTAP19-2Q3LHN2 52 aa4.86□□□□□ -1.63
TRAPPC9-202ENST00000438773 HERC1Q15751 4861 aa4.86□□□□□ -1.63
TRAPPC9-202ENST00000438773 SPRR2GQ9BYE4 73 aa4.85□□□□□ -1.63
TRAPPC9-202ENST00000438773 KRTAP10-12P60413 245 aa4.83□□□□□ -1.64
TRAPPC9-202ENST00000438773 FAT4Q6V0I7 4981 aa4.81□□□□□ -1.64
TRAPPC9-202ENST00000438773 LCE2CQ5TA81 110 aa4.77□□□□□ -1.65
TRAPPC9-202ENST00000438773 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
TRAPPC9-202ENST00000438773 CRCT1Q9UGL9 99 aa4.75□□□□□ -1.65
TRAPPC9-202ENST00000438773 KRTAP19-1Q8IUB9 90 aa4.73□□□□□ -1.65
TRAPPC9-202ENST00000438773 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
TRAPPC9-202ENST00000438773 FLGP20930 4061 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC9-202ENST00000438773 KRTAP12-3P60328 96 aa4.7□□□□□ -1.66
TRAPPC9-202ENST00000438773 HMCN2Q8NDA2 5059 aa4.69□□□□□ -1.66
TRAPPC9-202ENST00000438773 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
TRAPPC9-202ENST00000438773 KRTAP8-1Q8IUC2 63 aa4.62□□□□□ -1.67
TRAPPC9-202ENST00000438773 KRTAP19-8Q3LI54 63 aa4.6□□□□□ -1.67
TRAPPC9-202ENST00000438773 RNF213Q63HN8 5207 aa4.6□□□□□ -1.67
TRAPPC9-202ENST00000438773 SPRR5A0A1B0GTR4 108 aa4.6□□□□□ -1.67
TRAPPC9-202ENST00000438773 UBR4Q5T4S7 5183 aa4.59□□□□□ -1.68
TRAPPC9-202ENST00000438773 MT1BP07438 61 aa4.53□□□□□ -1.68
TRAPPC9-202ENST00000438773 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
TRAPPC9-202ENST00000438773 INE1O15225 51 aa4.5□□□□□ -1.69
TRAPPC9-202ENST00000438773 MT1XP80297 61 aa4.47□□□□□ -1.69
TRAPPC9-202ENST00000438773 KRTAP9-2Q9BYQ4 174 aa4.46□□□□□ -1.69
TRAPPC9-202ENST00000438773 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
TRAPPC9-202ENST00000438773 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC9-202ENST00000438773 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
TRAPPC9-202ENST00000438773 FSIP2Q5CZC0 6907 aa4.4□□□□□ -1.7
TRAPPC9-202ENST00000438773 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
TRAPPC9-202ENST00000438773 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
TRAPPC9-202ENST00000438773 LCE2BO14633 110 aa4.37□□□□□ -1.71
TRAPPC9-202ENST00000438773 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
TRAPPC9-202ENST00000438773 LCE2AQ5TA79 106 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC9-202ENST00000438773 KRTAP9-6A0A140TA67 174 aa4.31□□□□□ -1.72
TRAPPC9-202ENST00000438773 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
TRAPPC9-202ENST00000438773 LCE2DQ5TA82 110 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC9-202ENST00000438773 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
TRAPPC9-202ENST00000438773 KMT2DO14686 5537 aa4.24□□□□□ -1.73
TRAPPC9-202ENST00000438773 USH2AO75445 5202 aa4.23□□□□□ -1.73
TRAPPC9-202ENST00000438773 SPRR2EP22531 72 aa4.22□□□□□ -1.73
TRAPPC9-202ENST00000438773 SPRR2BP35325 72 aa4.22□□□□□ -1.73
TRAPPC9-202ENST00000438773 SPRR2AP35326 72 aa4.22□□□□□ -1.73
TRAPPC9-202ENST00000438773 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
TRAPPC9-202ENST00000438773 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms