RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 A6NN06 94 aa12.24□□□□□ -0.45
MBD3-202ENST00000434436 MIR22HGQ0VDD5 57 aa12.23□□□□□ -0.45
MBD3-202ENST00000434436 TPRXLQ17RH7 258 aa12.18□□□□□ -0.46
MBD3-202ENST00000434436 LRP2P98164 4655 aa12.09□□□□□ -0.47
MBD3-202ENST00000434436 KRTAP3-3Q9BYR6 98 aa12.09□□□□□ -0.47
MBD3-202ENST00000434436 ABCA13Q86UQ4 5058 aa12.06□□□□□ -0.48
MBD3-202ENST00000434436 LPAP08519 4548 aa12.03□□□□□ -0.48
MBD3-202ENST00000434436 KTN1-AS1Q86SY8 53 aa12.02□□□□□ -0.48
MBD3-202ENST00000434436 A0A1B0GU33 70 aa12.01□□□□□ -0.49
MBD3-202ENST00000434436 H0YAA0 97 aa12□□□□□ -0.49
MBD3-202ENST00000434436 H1FX-AS1Q4G0G2 97 aa12□□□□□ -0.49
MBD3-202ENST00000434436 S4R3F8 94 aa11.99□□□□□ -0.49
MBD3-202ENST00000434436 KRTAP10-6P60371 365 aaPredicted RBP11.86□□□□□ -0.51
MBD3-202ENST00000434436 J3QL48 77 aa11.82□□□□□ -0.52
MBD3-202ENST00000434436 HERC2O95714 4834 aa11.82□□□□□ -0.52
MBD3-202ENST00000434436 KRTAP3-2Q9BYR7 98 aa11.82□□□□□ -0.52
MBD3-202ENST00000434436 RBM12B-AS1Q9P1G2 102 aa11.8□□□□□ -0.52
MBD3-202ENST00000434436 BIRC6Q9NR09 4857 aa11.73□□□□□ -0.53
MBD3-202ENST00000434436 SEC61BP60468 96 aaKnown RBP11.7□□□□□ -0.54
MBD3-202ENST00000434436 ADM2Q7Z4H4 148 aa11.68□□□□□ -0.54
MBD3-202ENST00000434436 P0C880 135 aa11.67□□□□□ -0.54
MBD3-202ENST00000434436 KRTAP13-4Q3LI77 160 aa11.67□□□□□ -0.54
MBD3-202ENST00000434436 PRAC1Q96KF2 57 aa11.64□□□□□ -0.55
MBD3-202ENST00000434436 MUC17Q685J3 4493 aa11.63□□□□□ -0.55
MBD3-202ENST00000434436 KRTAP4-1Q9BYQ7 146 aa11.62□□□□□ -0.55
MBD3-202ENST00000434436 CSAG1Q6PB30 78 aa11.61□□□□□ -0.55
MBD3-202ENST00000434436 A0A0D9SG42 100 aa11.48□□□□□ -0.57
MBD3-202ENST00000434436 K7ERS5 55 aa11.46□□□□□ -0.58
MBD3-202ENST00000434436 KRTAP19-2Q3LHN2 52 aa11.39□□□□□ -0.59
MBD3-202ENST00000434436 PCLOQ9Y6V0 5065 aa11.28□□□□□ -0.6
MBD3-202ENST00000434436 M0QZ58 72 aa11.27□□□□□ -0.6
MBD3-202ENST00000434436 KRTAP12-2P59991 146 aa11.24□□□□□ -0.61
MBD3-202ENST00000434436 HERC1Q15751 4861 aa11.22□□□□□ -0.61
MBD3-202ENST00000434436 KRTAP12-1P59990 96 aa11.2□□□□□ -0.62
MBD3-202ENST00000434436 ROMO1P60602 79 aa11.18□□□□□ -0.62
MBD3-202ENST00000434436 HMCN2Q8NDA2 5059 aa11.16□□□□□ -0.62
MBD3-202ENST00000434436 MUC2Q02817 5179 aa11.14□□□□□ -0.63
MBD3-202ENST00000434436 SPINT4Q6UDR6 99 aa11.13□□□□□ -0.63
MBD3-202ENST00000434436 LORP23490 312 aaPredicted RBP11.1□□□□□ -0.63
MBD3-202ENST00000434436 KRTAP25-1Q3LHN0 102 aa11.1□□□□□ -0.63
MBD3-202ENST00000434436 R4GN34 69 aa11.08□□□□□ -0.64
MBD3-202ENST00000434436 CRIPTQ9P021 101 aa11.07□□□□□ -0.64
MBD3-202ENST00000434436 LINC01554Q52M75 96 aa11.06□□□□□ -0.64
MBD3-202ENST00000434436 FLGP20930 4061 aaPredicted RBP11.06□□□□□ -0.64
MBD3-202ENST00000434436 LCE2CQ5TA81 110 aa10.85□□□□□ -0.67
MBD3-202ENST00000434436 C10orf95Q9H7T3 257 aa10.77□□□□□ -0.68
MBD3-202ENST00000434436 FAT4Q6V0I7 4981 aa10.66□□□□□ -0.7
MBD3-202ENST00000434436 RNF213Q63HN8 5207 aa10.65□□□□□ -0.71
MBD3-202ENST00000434436 UBR4Q5T4S7 5183 aa10.61□□□□□ -0.71
MBD3-202ENST00000434436 MT1HP80294 61 aa10.55□□□□□ -0.72
MBD3-202ENST00000434436 M0R2T5 61 aa10.48□□□□□ -0.73
MBD3-202ENST00000434436 CAMK2N1Q7Z7J9 78 aa10.45□□□□□ -0.74
MBD3-202ENST00000434436 SPRR2GQ9BYE4 73 aa10.36□□□□□ -0.75
MBD3-202ENST00000434436 KRTAP19-1Q8IUB9 90 aa10.34□□□□□ -0.75
MBD3-202ENST00000434436 MT2AP02795 61 aa10.3□□□□□ -0.76
MBD3-202ENST00000434436 MT1FP04733 61 aa10.28□□□□□ -0.76
MBD3-202ENST00000434436 KRTAP9-8Q9BYQ0 159 aa10.28□□□□□ -0.76
MBD3-202ENST00000434436 KRTAP10-10P60014 251 aa10.22□□□□□ -0.77
MBD3-202ENST00000434436 PLAC4Q8WY50 150 aa10.12□□□□□ -0.79
MBD3-202ENST00000434436 KRTAP15-1Q3LI76 137 aa10.04□□□□□ -0.8
MBD3-202ENST00000434436 TNP1P09430 55 aa10.03□□□□□ -0.8
MBD3-202ENST00000434436 PP632Q6XCG6 107 aa10.03□□□□□ -0.8
MBD3-202ENST00000434436 KRTAP19-8Q3LI54 63 aa9.98□□□□□ -0.81
MBD3-202ENST00000434436 MT1BP07438 61 aa9.87□□□□□ -0.83
MBD3-202ENST00000434436 KRTAP9-3Q9BYQ3 159 aa9.86□□□□□ -0.83
MBD3-202ENST00000434436 KRTAP23-1A1A580 65 aa9.85□□□□□ -0.83
MBD3-202ENST00000434436 H3BS24 57 aa9.78□□□□□ -0.84
MBD3-202ENST00000434436 KRTAP10-5P60370 271 aa9.7□□□□□ -0.86
MBD3-202ENST00000434436 MT1XP80297 61 aa9.7□□□□□ -0.86
MBD3-202ENST00000434436 LCE2AQ5TA79 106 aaPredicted RBP9.66□□□□□ -0.86
MBD3-202ENST00000434436 LCE3AQ5TA76 89 aa9.59□□□□□ -0.87
MBD3-202ENST00000434436 NDUFAF8A1L188 74 aa9.56□□□□□ -0.88
MBD3-202ENST00000434436 LCE2BO14633 110 aa9.53□□□□□ -0.88
MBD3-202ENST00000434436 KRTAP10-7P60409 375 aaPredicted RBP9.38□□□□□ -0.91
MBD3-202ENST00000434436 KRTAP8-1Q8IUC2 63 aa9.36□□□□□ -0.91
MBD3-202ENST00000434436 PRO2289Q9P1D8 64 aa9.35□□□□□ -0.91
MBD3-202ENST00000434436 KRTAP10-12P60413 245 aa9.35□□□□□ -0.91
MBD3-202ENST00000434436 SPRR5A0A1B0GTR4 108 aa9.25□□□□□ -0.93
MBD3-202ENST00000434436 USH2AO75445 5202 aa9.2□□□□□ -0.94
MBD3-202ENST00000434436 LUZP6Q538Z0 58 aa9.17□□□□□ -0.94
MBD3-202ENST00000434436 KRTAP12-3P60328 96 aa9.14□□□□□ -0.95
MBD3-202ENST00000434436 KRTAP19-5Q3LI72 72 aa8.92□□□□□ -0.98
MBD3-202ENST00000434436 KRTAP4-8A0A0G2JLE6 195 aa8.89□□□□□ -0.99
MBD3-202ENST00000434436 KRTAP4-8Q9BYQ9 185 aa8.89□□□□□ -0.99
MBD3-202ENST00000434436 KMT2DO14686 5537 aa8.87□□□□□ -0.99
MBD3-202ENST00000434436 SSPOA2VEC9 5147 aa8.8□□□□□ -1
MBD3-202ENST00000434436 A0A0A0MQY5 61 aa8.76□□□□□ -1.01
MBD3-202ENST00000434436 KRTAP19-6Q3LI70 58 aa8.69□□□□□ -1.02
MBD3-202ENST00000434436 FSIP2Q5CZC0 6907 aa8.68□□□□□ -1.02
MBD3-202ENST00000434436 KRTAP19-7Q3SYF9 63 aa8.65□□□□□ -1.02
MBD3-202ENST00000434436 LCE3CQ5T5A8 94 aa8.59□□□□□ -1.03
MBD3-202ENST00000434436 LCE2DQ5TA82 110 aaPredicted RBP8.44□□□□□ -1.06
MBD3-202ENST00000434436 MT1EP04732 61 aa8.42□□□□□ -1.06
MBD3-202ENST00000434436 MT1LQ93083 61 aa8.36□□□□□ -1.07
MBD3-202ENST00000434436 KRTAP4-7Q9BYR0 210 aa8.32□□□□□ -1.08
MBD3-202ENST00000434436 KRTAP9-6A8MVA2 160 aa8.27□□□□□ -1.09
MBD3-202ENST00000434436 KRTAP19-4Q3LI73 84 aa8.26□□□□□ -1.09
MBD3-202ENST00000434436 FCGBPQ9Y6R7 5405 aaPredicted RBP8.25□□□□□ -1.09
MBD3-202ENST00000434436 KRTAP9-2Q9BYQ4 174 aa8.14□□□□□ -1.11
MBD3-202ENST00000434436 MUC12Q9UKN1 5478 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms