RNA–Protein interactions for RNA: ENST00000432641.2

SDHAF3-202, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHAF3, Length 2,060 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-202ENST00000432641 COX6B2Q6YFQ2 88 aa10.74□□□□□ -0.69
SDHAF3-202ENST00000432641 KIAA1109Q2LD37 5005 aa10.74□□□□□ -0.69
SDHAF3-202ENST00000432641 DMBT1Q9UGM3 2413 aaPredicted RBP10.73□□□□□ -0.69
SDHAF3-202ENST00000432641 KRTAP3-1Q9BYR8 98 aa10.72□□□□□ -0.69
SDHAF3-202ENST00000432641 TPRXLQ17RH7 258 aa10.61□□□□□ -0.71
SDHAF3-202ENST00000432641 EPPK1P58107 5090 aaKnown RBP10.59□□□□□ -0.71
SDHAF3-202ENST00000432641 CSAG1Q6PB30 78 aa10.57□□□□□ -0.72
SDHAF3-202ENST00000432641 MYCBP2O75592 4640 aa10.56□□□□□ -0.72
SDHAF3-202ENST00000432641 KRTAP4-5Q9BYR2 181 aa10.44□□□□□ -0.74
SDHAF3-202ENST00000432641 H0YAA0 97 aa10.4□□□□□ -0.74
SDHAF3-202ENST00000432641 S4R3F8 94 aa10.37□□□□□ -0.75
SDHAF3-202ENST00000432641 A0A1B0GU33 70 aa10.35□□□□□ -0.75
SDHAF3-202ENST00000432641 H1FX-AS1Q4G0G2 97 aa10.33□□□□□ -0.76
SDHAF3-202ENST00000432641 KRTAP3-3Q9BYR6 98 aa10.32□□□□□ -0.76
SDHAF3-202ENST00000432641 KRTAP25-1Q3LHN0 102 aa10.31□□□□□ -0.76
SDHAF3-202ENST00000432641 J3QL48 77 aa10.3□□□□□ -0.76
SDHAF3-202ENST00000432641 H3BS24 57 aa10.27□□□□□ -0.77
SDHAF3-202ENST00000432641 SEC61BP60468 96 aaKnown RBP10.25□□□□□ -0.77
SDHAF3-202ENST00000432641 LRP2P98164 4655 aa10.18□□□□□ -0.78
SDHAF3-202ENST00000432641 ABCA13Q86UQ4 5058 aa10.15□□□□□ -0.79
SDHAF3-202ENST00000432641 KRTAP10-6P60371 365 aaPredicted RBP10.13□□□□□ -0.79
SDHAF3-202ENST00000432641 ROMO1P60602 79 aa10.12□□□□□ -0.79
SDHAF3-202ENST00000432641 KRTAP3-2Q9BYR7 98 aa10.08□□□□□ -0.8
SDHAF3-202ENST00000432641 LPAP08519 4548 aa10.08□□□□□ -0.8
SDHAF3-202ENST00000432641 HERC2O95714 4834 aa10.07□□□□□ -0.8
SDHAF3-202ENST00000432641 BIRC6Q9NR09 4857 aa10.07□□□□□ -0.8
SDHAF3-202ENST00000432641 K7ERS5 55 aa10.06□□□□□ -0.8
SDHAF3-202ENST00000432641 P0C880 135 aa9.94□□□□□ -0.82
SDHAF3-202ENST00000432641 KRTAP13-4Q3LI77 160 aa9.89□□□□□ -0.83
SDHAF3-202ENST00000432641 MUC17Q685J3 4493 aa9.87□□□□□ -0.83
SDHAF3-202ENST00000432641 KRTAP4-1Q9BYQ7 146 aa9.86□□□□□ -0.83
SDHAF3-202ENST00000432641 CRIPTQ9P021 101 aa9.86□□□□□ -0.83
SDHAF3-202ENST00000432641 M0QZ58 72 aa9.83□□□□□ -0.84
SDHAF3-202ENST00000432641 A0A0D9SG42 100 aa9.78□□□□□ -0.84
SDHAF3-202ENST00000432641 KRTAP19-2Q3LHN2 52 aa9.72□□□□□ -0.85
SDHAF3-202ENST00000432641 R4GN34 69 aa9.59□□□□□ -0.87
SDHAF3-202ENST00000432641 KRTAP12-1P59990 96 aa9.58□□□□□ -0.88
SDHAF3-202ENST00000432641 SPINT4Q6UDR6 99 aa9.58□□□□□ -0.88
SDHAF3-202ENST00000432641 KRTAP12-2P59991 146 aa9.57□□□□□ -0.88
SDHAF3-202ENST00000432641 PCLOQ9Y6V0 5065 aa9.54□□□□□ -0.88
SDHAF3-202ENST00000432641 KRTAP15-1Q3LI76 137 aa9.53□□□□□ -0.88
SDHAF3-202ENST00000432641 HMCN2Q8NDA2 5059 aa9.52□□□□□ -0.89
SDHAF3-202ENST00000432641 C10orf95Q9H7T3 257 aa9.51□□□□□ -0.89
SDHAF3-202ENST00000432641 HERC1Q15751 4861 aa9.5□□□□□ -0.89
SDHAF3-202ENST00000432641 FLGP20930 4061 aaPredicted RBP9.44□□□□□ -0.9
SDHAF3-202ENST00000432641 LORP23490 312 aaPredicted RBP9.37□□□□□ -0.91
SDHAF3-202ENST00000432641 NDUFAF8A1L188 74 aa9.32□□□□□ -0.92
SDHAF3-202ENST00000432641 MUC2Q02817 5179 aa9.3□□□□□ -0.92
SDHAF3-202ENST00000432641 LCE2CQ5TA81 110 aa9.28□□□□□ -0.92
SDHAF3-202ENST00000432641 MT1HP80294 61 aa9.08□□□□□ -0.96
SDHAF3-202ENST00000432641 M0R2T5 61 aa9.07□□□□□ -0.96
SDHAF3-202ENST00000432641 CAMK2N1Q7Z7J9 78 aa9.04□□□□□ -0.96
SDHAF3-202ENST00000432641 RNF213Q63HN8 5207 aa9.02□□□□□ -0.97
SDHAF3-202ENST00000432641 SPRR2GQ9BYE4 73 aa8.98□□□□□ -0.97
SDHAF3-202ENST00000432641 UBR4Q5T4S7 5183 aa8.95□□□□□ -0.98
SDHAF3-202ENST00000432641 FAT4Q6V0I7 4981 aa8.91□□□□□ -0.98
SDHAF3-202ENST00000432641 PLAC4Q8WY50 150 aa8.87□□□□□ -0.99
SDHAF3-202ENST00000432641 KRTAP19-1Q8IUB9 90 aa8.85□□□□□ -0.99
SDHAF3-202ENST00000432641 MT2AP02795 61 aa8.84□□□□□ -0.99
SDHAF3-202ENST00000432641 KRTAP10-10P60014 251 aa8.82□□□□□ -1
SDHAF3-202ENST00000432641 KRTAP9-8Q9BYQ0 159 aa8.81□□□□□ -1
SDHAF3-202ENST00000432641 PP632Q6XCG6 107 aa8.81□□□□□ -1
SDHAF3-202ENST00000432641 MT1FP04733 61 aa8.79□□□□□ -1
SDHAF3-202ENST00000432641 TNP1P09430 55 aa8.71□□□□□ -1.01
SDHAF3-202ENST00000432641 KRTAP23-1A1A580 65 aa8.66□□□□□ -1.02
SDHAF3-202ENST00000432641 KRTAP19-8Q3LI54 63 aa8.65□□□□□ -1.02
SDHAF3-202ENST00000432641 LUZP6Q538Z0 58 aa8.53□□□□□ -1.04
SDHAF3-202ENST00000432641 KRTAP9-3Q9BYQ3 159 aa8.48□□□□□ -1.05
SDHAF3-202ENST00000432641 MT1BP07438 61 aa8.44□□□□□ -1.06
SDHAF3-202ENST00000432641 A0A0A0MQY5 61 aa8.39□□□□□ -1.07
SDHAF3-202ENST00000432641 LCE2AQ5TA79 106 aaPredicted RBP8.34□□□□□ -1.07
SDHAF3-202ENST00000432641 SPRR5A0A1B0GTR4 108 aa8.33□□□□□ -1.08
SDHAF3-202ENST00000432641 KRTAP10-5P60370 271 aa8.3□□□□□ -1.08
SDHAF3-202ENST00000432641 MT1XP80297 61 aa8.3□□□□□ -1.08
SDHAF3-202ENST00000432641 PRO2289Q9P1D8 64 aa8.24□□□□□ -1.09
SDHAF3-202ENST00000432641 LCE3AQ5TA76 89 aa8.18□□□□□ -1.1
SDHAF3-202ENST00000432641 LCE2BO14633 110 aa8.13□□□□□ -1.11
SDHAF3-202ENST00000432641 KRTAP8-1Q8IUC2 63 aa8.1□□□□□ -1.11
SDHAF3-202ENST00000432641 KRTAP10-12P60413 245 aa8.08□□□□□ -1.12
SDHAF3-202ENST00000432641 KRTAP10-7P60409 375 aaPredicted RBP7.97□□□□□ -1.13
SDHAF3-202ENST00000432641 KRTAP12-3P60328 96 aa7.88□□□□□ -1.15
SDHAF3-202ENST00000432641 USH2AO75445 5202 aa7.72□□□□□ -1.17
SDHAF3-202ENST00000432641 INE1O15225 51 aa7.63□□□□□ -1.19
SDHAF3-202ENST00000432641 KRTAP19-5Q3LI72 72 aa7.61□□□□□ -1.19
SDHAF3-202ENST00000432641 KRTAP19-6Q3LI70 58 aa7.56□□□□□ -1.2
SDHAF3-202ENST00000432641 KRTAP4-8A0A0G2JLE6 195 aa7.49□□□□□ -1.21
SDHAF3-202ENST00000432641 KRTAP4-8Q9BYQ9 185 aa7.49□□□□□ -1.21
SDHAF3-202ENST00000432641 SSPOA2VEC9 5147 aa7.49□□□□□ -1.21
SDHAF3-202ENST00000432641 KRTAP19-4Q3LI73 84 aa7.43□□□□□ -1.22
SDHAF3-202ENST00000432641 LCE2DQ5TA82 110 aaPredicted RBP7.42□□□□□ -1.22
SDHAF3-202ENST00000432641 LCE3CQ5T5A8 94 aa7.4□□□□□ -1.23
SDHAF3-202ENST00000432641 KRTAP19-7Q3SYF9 63 aa7.39□□□□□ -1.23
SDHAF3-202ENST00000432641 KMT2DO14686 5537 aa7.33□□□□□ -1.24
SDHAF3-202ENST00000432641 MT1EP04732 61 aa7.24□□□□□ -1.25
SDHAF3-202ENST00000432641 MT1LQ93083 61 aa7.18□□□□□ -1.26
SDHAF3-202ENST00000432641 FSIP2Q5CZC0 6907 aa7.05□□□□□ -1.28
SDHAF3-202ENST00000432641 FCGBPQ9Y6R7 5405 aaPredicted RBP6.99□□□□□ -1.29
SDHAF3-202ENST00000432641 KRTAP9-6A8MVA2 160 aa6.96□□□□□ -1.3
SDHAF3-202ENST00000432641 KRTAP4-7Q9BYR0 210 aa6.96□□□□□ -1.3
SDHAF3-202ENST00000432641 KRTAP19-3Q7Z4W3 81 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms