RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 PRAC1Q96KF2 57 aa8.67□□□□□ -1.02
CHFR-203ENST00000432561 RBM12B-AS1Q9P1G2 102 aa8.66□□□□□ -1.02
CHFR-203ENST00000432561 H0YAA0 97 aa8.64□□□□□ -1.03
CHFR-203ENST00000432561 XP32Q5T750 250 aa8.64□□□□□ -1.03
CHFR-203ENST00000432561 LPAP08519 4548 aa8.64□□□□□ -1.03
CHFR-203ENST00000432561 RPL37P61927 97 aaKnown RBP8.62□□□□□ -1.03
CHFR-203ENST00000432561 MT1HL1P0DM35 61 aa8.58□□□□□ -1.04
CHFR-203ENST00000432561 A0A1B0GU33 70 aa8.58□□□□□ -1.04
CHFR-203ENST00000432561 LRP2P98164 4655 aa8.58□□□□□ -1.04
CHFR-203ENST00000432561 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
CHFR-203ENST00000432561 ABCA13Q86UQ4 5058 aa8.52□□□□□ -1.05
CHFR-203ENST00000432561 KRTAP3-3Q9BYR6 98 aa8.51□□□□□ -1.05
CHFR-203ENST00000432561 KRTAP4-5Q9BYR2 181 aa8.42□□□□□ -1.06
CHFR-203ENST00000432561 S4R3F8 94 aa8.41□□□□□ -1.06
CHFR-203ENST00000432561 KRTAP10-6P60371 365 aaPredicted RBP8.4□□□□□ -1.07
CHFR-203ENST00000432561 CSAG1Q6PB30 78 aa8.38□□□□□ -1.07
CHFR-203ENST00000432561 KRTAP13-4Q3LI77 160 aa8.35□□□□□ -1.07
CHFR-203ENST00000432561 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
CHFR-203ENST00000432561 A0A0D9SG42 100 aa8.31□□□□□ -1.08
CHFR-203ENST00000432561 P0C880 135 aa8.31□□□□□ -1.08
CHFR-203ENST00000432561 TPRXLQ17RH7 258 aa8.28□□□□□ -1.08
CHFR-203ENST00000432561 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
CHFR-203ENST00000432561 LINC01554Q52M75 96 aa8.21□□□□□ -1.1
CHFR-203ENST00000432561 K7ERS5 55 aa8.2□□□□□ -1.1
CHFR-203ENST00000432561 HERC2O95714 4834 aa8.15□□□□□ -1.1
CHFR-203ENST00000432561 MUC17Q685J3 4493 aa8.11□□□□□ -1.11
CHFR-203ENST00000432561 KRTAP25-1Q3LHN0 102 aa8.1□□□□□ -1.11
CHFR-203ENST00000432561 KRTAP12-2P59991 146 aa8.06□□□□□ -1.12
CHFR-203ENST00000432561 ROMO1P60602 79 aa8.04□□□□□ -1.12
CHFR-203ENST00000432561 J3QL48 77 aa8.03□□□□□ -1.12
CHFR-203ENST00000432561 KRTAP4-1Q9BYQ7 146 aa8.03□□□□□ -1.12
CHFR-203ENST00000432561 MUC2Q02817 5179 aa8.02□□□□□ -1.13
CHFR-203ENST00000432561 SPINT4Q6UDR6 99 aa8□□□□□ -1.13
CHFR-203ENST00000432561 SEC61BP60468 96 aaKnown RBP7.97□□□□□ -1.13
CHFR-203ENST00000432561 KRTAP12-1P59990 96 aa7.96□□□□□ -1.14
CHFR-203ENST00000432561 C10orf95Q9H7T3 257 aa7.91□□□□□ -1.14
CHFR-203ENST00000432561 M0QZ58 72 aa7.88□□□□□ -1.15
CHFR-203ENST00000432561 BIRC6Q9NR09 4857 aa7.88□□□□□ -1.15
CHFR-203ENST00000432561 LORP23490 312 aaPredicted RBP7.86□□□□□ -1.15
CHFR-203ENST00000432561 HERC1Q15751 4861 aa7.85□□□□□ -1.15
CHFR-203ENST00000432561 H3BS24 57 aa7.83□□□□□ -1.16
CHFR-203ENST00000432561 R4GN34 69 aa7.82□□□□□ -1.16
CHFR-203ENST00000432561 PCLOQ9Y6V0 5065 aa7.8□□□□□ -1.16
CHFR-203ENST00000432561 KRTAP19-2Q3LHN2 52 aa7.79□□□□□ -1.16
CHFR-203ENST00000432561 HMCN2Q8NDA2 5059 aa7.66□□□□□ -1.18
CHFR-203ENST00000432561 FAT4Q6V0I7 4981 aa7.65□□□□□ -1.18
CHFR-203ENST00000432561 FLGP20930 4061 aaPredicted RBP7.65□□□□□ -1.18
CHFR-203ENST00000432561 A0A0A0MQY5 61 aa7.53□□□□□ -1.2
CHFR-203ENST00000432561 RNF213Q63HN8 5207 aa7.49□□□□□ -1.21
CHFR-203ENST00000432561 UBR4Q5T4S7 5183 aa7.44□□□□□ -1.22
CHFR-203ENST00000432561 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
CHFR-203ENST00000432561 LCE2CQ5TA81 110 aa7.38□□□□□ -1.23
CHFR-203ENST00000432561 KRTAP15-1Q3LI76 137 aa7.36□□□□□ -1.23
CHFR-203ENST00000432561 M0R2T5 61 aa7.25□□□□□ -1.25
CHFR-203ENST00000432561 NDUFAF8A1L188 74 aa7.19□□□□□ -1.26
CHFR-203ENST00000432561 MT1HP80294 61 aa7.19□□□□□ -1.26
CHFR-203ENST00000432561 KRTAP19-1Q8IUB9 90 aa7.14□□□□□ -1.27
CHFR-203ENST00000432561 PLAC4Q8WY50 150 aa7.12□□□□□ -1.27
CHFR-203ENST00000432561 SPRR2GQ9BYE4 73 aa7.11□□□□□ -1.27
CHFR-203ENST00000432561 MT1FP04733 61 aa7.08□□□□□ -1.28
CHFR-203ENST00000432561 TNP1P09430 55 aa7.07□□□□□ -1.28
CHFR-203ENST00000432561 PP632Q6XCG6 107 aa7.06□□□□□ -1.28
CHFR-203ENST00000432561 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
CHFR-203ENST00000432561 MT2AP02795 61 aa7.05□□□□□ -1.28
CHFR-203ENST00000432561 KRTAP9-8Q9BYQ0 159 aa7.01□□□□□ -1.29
CHFR-203ENST00000432561 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
CHFR-203ENST00000432561 LCE3AQ5TA76 89 aa6.8□□□□□ -1.32
CHFR-203ENST00000432561 MT1BP07438 61 aa6.79□□□□□ -1.32
CHFR-203ENST00000432561 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
CHFR-203ENST00000432561 KRTAP10-5P60370 271 aa6.72□□□□□ -1.33
CHFR-203ENST00000432561 MT1XP80297 61 aa6.72□□□□□ -1.33
CHFR-203ENST00000432561 LUZP6Q538Z0 58 aa6.71□□□□□ -1.33
CHFR-203ENST00000432561 KRTAP9-3Q9BYQ3 159 aa6.7□□□□□ -1.34
CHFR-203ENST00000432561 USH2AO75445 5202 aa6.67□□□□□ -1.34
CHFR-203ENST00000432561 SPRR5A0A1B0GTR4 108 aa6.59□□□□□ -1.35
CHFR-203ENST00000432561 KRTAP10-7P60409 375 aaPredicted RBP6.57□□□□□ -1.36
CHFR-203ENST00000432561 KRTAP10-12P60413 245 aa6.53□□□□□ -1.36
CHFR-203ENST00000432561 KRTAP8-1Q8IUC2 63 aa6.53□□□□□ -1.36
CHFR-203ENST00000432561 LCE2BO14633 110 aa6.51□□□□□ -1.37
CHFR-203ENST00000432561 KMT2DO14686 5537 aa6.49□□□□□ -1.37
CHFR-203ENST00000432561 KRTAP12-3P60328 96 aa6.44□□□□□ -1.38
CHFR-203ENST00000432561 LCE2AQ5TA79 106 aaPredicted RBP6.43□□□□□ -1.38
CHFR-203ENST00000432561 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
CHFR-203ENST00000432561 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
CHFR-203ENST00000432561 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
CHFR-203ENST00000432561 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
CHFR-203ENST00000432561 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
CHFR-203ENST00000432561 SSPOA2VEC9 5147 aa6.09□□□□□ -1.43
CHFR-203ENST00000432561 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
CHFR-203ENST00000432561 KRTAP19-7Q3SYF9 63 aa5.99□□□□□ -1.45
CHFR-203ENST00000432561 KRTAP4-7Q9BYR0 210 aa5.95□□□□□ -1.46
CHFR-203ENST00000432561 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
CHFR-203ENST00000432561 MT1EP04732 61 aa5.8□□□□□ -1.48
CHFR-203ENST00000432561 KRTAP19-6Q3LI70 58 aa5.78□□□□□ -1.48
CHFR-203ENST00000432561 MT1LQ93083 61 aa5.78□□□□□ -1.48
CHFR-203ENST00000432561 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
CHFR-203ENST00000432561 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
CHFR-203ENST00000432561 INE1O15225 51 aa5.62□□□□□ -1.51
CHFR-203ENST00000432561 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
CHFR-203ENST00000432561 LCE2DQ5TA82 110 aaPredicted RBP5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms