RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 XP32Q5T750 250 aa6.01□□□□□ -1.45
CLDN4-202ENST00000431918 S4R3F8 94 aa6.01□□□□□ -1.45
CLDN4-202ENST00000431918 FAT2Q9NYQ8 4349 aa6.01□□□□□ -1.45
CLDN4-202ENST00000431918 H0YAA0 97 aa5.99□□□□□ -1.45
CLDN4-202ENST00000431918 H1FX-AS1Q4G0G2 97 aa5.96□□□□□ -1.45
CLDN4-202ENST00000431918 PKD1P98161 4303 aa5.95□□□□□ -1.46
CLDN4-202ENST00000431918 KRTAP3-1Q9BYR8 98 aa5.95□□□□□ -1.46
CLDN4-202ENST00000431918 LUZP6Q538Z0 58 aa5.93□□□□□ -1.46
CLDN4-202ENST00000431918 KMT2CQ8NEZ4 4911 aaKnown RBP5.91□□□□□ -1.46
CLDN4-202ENST00000431918 APOBP04114 4563 aaKnown RBP5.9□□□□□ -1.46
CLDN4-202ENST00000431918 LRP1Q07954 4544 aaKnown RBP5.89□□□□□ -1.47
CLDN4-202ENST00000431918 MYCBP2O75592 4640 aa5.88□□□□□ -1.47
CLDN4-202ENST00000431918 KIAA1109Q2LD37 5005 aa5.88□□□□□ -1.47
CLDN4-202ENST00000431918 RYR2Q92736 4967 aa5.86□□□□□ -1.47
CLDN4-202ENST00000431918 MT1HL1P0DM35 61 aa5.84□□□□□ -1.47
CLDN4-202ENST00000431918 C10orf95Q9H7T3 257 aa5.84□□□□□ -1.47
CLDN4-202ENST00000431918 SEC61BP60468 96 aaKnown RBP5.83□□□□□ -1.48
CLDN4-202ENST00000431918 RYR3Q15413 4870 aa5.8□□□□□ -1.48
CLDN4-202ENST00000431918 KRTAP4-5Q9BYR2 181 aa5.8□□□□□ -1.48
CLDN4-202ENST00000431918 RYR1P21817 5038 aa5.79□□□□□ -1.48
CLDN4-202ENST00000431918 TPRXLQ17RH7 258 aa5.78□□□□□ -1.48
CLDN4-202ENST00000431918 KRTAP17-1Q9BYP8 105 aa5.77□□□□□ -1.49
CLDN4-202ENST00000431918 FAT3Q8TDW7 4589 aa5.74□□□□□ -1.49
CLDN4-202ENST00000431918 R4GN34 69 aa5.72□□□□□ -1.49
CLDN4-202ENST00000431918 M0QZ58 72 aa5.71□□□□□ -1.5
CLDN4-202ENST00000431918 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
CLDN4-202ENST00000431918 HSPG2P98160 4391 aa5.67□□□□□ -1.5
CLDN4-202ENST00000431918 KRTAP3-3Q9BYR6 98 aa5.65□□□□□ -1.5
CLDN4-202ENST00000431918 KRTAP10-6P60371 365 aaPredicted RBP5.63□□□□□ -1.51
CLDN4-202ENST00000431918 KRTAP13-4Q3LI77 160 aa5.62□□□□□ -1.51
CLDN4-202ENST00000431918 PKHD1L1Q86WI1 4243 aa5.59□□□□□ -1.51
CLDN4-202ENST00000431918 M0R2T5 61 aa5.57□□□□□ -1.52
CLDN4-202ENST00000431918 CAMK2N1Q7Z7J9 78 aa5.55□□□□□ -1.52
CLDN4-202ENST00000431918 KRTAP3-2Q9BYR7 98 aa5.55□□□□□ -1.52
CLDN4-202ENST00000431918 LRP2P98164 4655 aa5.55□□□□□ -1.52
CLDN4-202ENST00000431918 EPPK1P58107 5090 aaKnown RBP5.54□□□□□ -1.52
CLDN4-202ENST00000431918 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
CLDN4-202ENST00000431918 TNXBP22105 4242 aa5.5□□□□□ -1.53
CLDN4-202ENST00000431918 PLAC4Q8WY50 150 aa5.45□□□□□ -1.54
CLDN4-202ENST00000431918 LPAP08519 4548 aa5.45□□□□□ -1.54
CLDN4-202ENST00000431918 KRTAP12-1P59990 96 aa5.43□□□□□ -1.54
CLDN4-202ENST00000431918 HERC2O95714 4834 aa5.41□□□□□ -1.54
CLDN4-202ENST00000431918 KRTAP4-1Q9BYQ7 146 aa5.4□□□□□ -1.54
CLDN4-202ENST00000431918 ABCA13Q86UQ4 5058 aa5.34□□□□□ -1.55
CLDN4-202ENST00000431918 LORP23490 312 aaPredicted RBP5.32□□□□□ -1.56
CLDN4-202ENST00000431918 KRTAP10-10P60014 251 aa5.19□□□□□ -1.58
CLDN4-202ENST00000431918 BIRC6Q9NR09 4857 aa5.18□□□□□ -1.58
CLDN4-202ENST00000431918 MUC2Q02817 5179 aa5.14□□□□□ -1.59
CLDN4-202ENST00000431918 TNP1P09430 55 aa5.13□□□□□ -1.59
CLDN4-202ENST00000431918 HERC1Q15751 4861 aa5.1□□□□□ -1.59
CLDN4-202ENST00000431918 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
CLDN4-202ENST00000431918 KRTAP19-2Q3LHN2 52 aa4.98□□□□□ -1.61
CLDN4-202ENST00000431918 PCLOQ9Y6V0 5065 aa4.97□□□□□ -1.61
CLDN4-202ENST00000431918 MUC17Q685J3 4493 aa4.96□□□□□ -1.62
CLDN4-202ENST00000431918 RNF213Q63HN8 5207 aa4.96□□□□□ -1.62
CLDN4-202ENST00000431918 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
CLDN4-202ENST00000431918 PRO2289Q9P1D8 64 aa4.95□□□□□ -1.62
CLDN4-202ENST00000431918 MT1HP80294 61 aa4.93□□□□□ -1.62
CLDN4-202ENST00000431918 FLGP20930 4061 aaPredicted RBP4.88□□□□□ -1.63
CLDN4-202ENST00000431918 LCE2CQ5TA81 110 aa4.87□□□□□ -1.63
CLDN4-202ENST00000431918 HMCN2Q8NDA2 5059 aa4.87□□□□□ -1.63
CLDN4-202ENST00000431918 UBR4Q5T4S7 5183 aa4.86□□□□□ -1.63
CLDN4-202ENST00000431918 MT2AP02795 61 aa4.84□□□□□ -1.63
CLDN4-202ENST00000431918 MT1FP04733 61 aa4.84□□□□□ -1.64
CLDN4-202ENST00000431918 SPRR2GQ9BYE4 73 aa4.79□□□□□ -1.64
CLDN4-202ENST00000431918 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
CLDN4-202ENST00000431918 INE1O15225 51 aa4.75□□□□□ -1.65
CLDN4-202ENST00000431918 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
CLDN4-202ENST00000431918 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
CLDN4-202ENST00000431918 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
CLDN4-202ENST00000431918 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
CLDN4-202ENST00000431918 MT1BP07438 61 aa4.56□□□□□ -1.68
CLDN4-202ENST00000431918 KRTAP19-8Q3LI54 63 aa4.55□□□□□ -1.68
CLDN4-202ENST00000431918 SPRR5A0A1B0GTR4 108 aa4.53□□□□□ -1.68
CLDN4-202ENST00000431918 KRTAP12-3P60328 96 aa4.53□□□□□ -1.68
CLDN4-202ENST00000431918 MT1XP80297 61 aa4.51□□□□□ -1.69
CLDN4-202ENST00000431918 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
CLDN4-202ENST00000431918 KRTAP10-5P60370 271 aa4.49□□□□□ -1.69
CLDN4-202ENST00000431918 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
CLDN4-202ENST00000431918 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
CLDN4-202ENST00000431918 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
CLDN4-202ENST00000431918 KRTAP8-1Q8IUC2 63 aa4.4□□□□□ -1.7
CLDN4-202ENST00000431918 LCE2BO14633 110 aa4.4□□□□□ -1.71
CLDN4-202ENST00000431918 USH2AO75445 5202 aa4.38□□□□□ -1.71
CLDN4-202ENST00000431918 KRTAP19-5Q3LI72 72 aa4.33□□□□□ -1.72
CLDN4-202ENST00000431918 KRTAP4-8A0A0G2JLE6 195 aa4.31□□□□□ -1.72
CLDN4-202ENST00000431918 KRTAP4-8Q9BYQ9 185 aa4.31□□□□□ -1.72
CLDN4-202ENST00000431918 CRCT1Q9UGL9 99 aa4.28□□□□□ -1.72
CLDN4-202ENST00000431918 LCE2AQ5TA79 106 aaPredicted RBP4.27□□□□□ -1.73
CLDN4-202ENST00000431918 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
CLDN4-202ENST00000431918 KMT2DO14686 5537 aa4.22□□□□□ -1.73
CLDN4-202ENST00000431918 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
CLDN4-202ENST00000431918 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
CLDN4-202ENST00000431918 KRTAP19-7Q3SYF9 63 aa3.97□□□□□ -1.77
CLDN4-202ENST00000431918 SPRR2FQ96RM1 72 aa3.96□□□□□ -1.78
CLDN4-202ENST00000431918 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
CLDN4-202ENST00000431918 MT1EP04732 61 aa3.94□□□□□ -1.78
CLDN4-202ENST00000431918 MT1LQ93083 61 aa3.93□□□□□ -1.78
CLDN4-202ENST00000431918 KRTAP19-6Q3LI70 58 aa3.92□□□□□ -1.78
CLDN4-202ENST00000431918 KRTAP9-2Q9BYQ4 174 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms