RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 LPAP08519 4548 aa6.15□□□□□ -1.43
SMPD4-205ENST00000431183 HERC1Q15751 4861 aa6.13□□□□□ -1.43
SMPD4-205ENST00000431183 KRTAP16-1A8MUX0 517 aa6.12□□□□□ -1.43
SMPD4-205ENST00000431183 BIRC6Q9NR09 4857 aa6.11□□□□□ -1.43
SMPD4-205ENST00000431183 UQCR11O14957 56 aa6.11□□□□□ -1.43
SMPD4-205ENST00000431183 PCLOQ9Y6V0 5065 aa6.09□□□□□ -1.43
SMPD4-205ENST00000431183 SPATA8Q6RVD6 105 aa6.09□□□□□ -1.43
SMPD4-205ENST00000431183 DMAC1Q96GE9 116 aa6.07□□□□□ -1.44
SMPD4-205ENST00000431183 XP32Q5T750 250 aa6.06□□□□□ -1.44
SMPD4-205ENST00000431183 RPS29P62273 56 aaKnown RBP6.04□□□□□ -1.44
SMPD4-205ENST00000431183 TNXBP22105 4242 aa6.04□□□□□ -1.44
SMPD4-205ENST00000431183 MUC2Q02817 5179 aa6.03□□□□□ -1.44
SMPD4-205ENST00000431183 KRTAP13-3Q3SY46 172 aa6.03□□□□□ -1.44
SMPD4-205ENST00000431183 CRIPTQ9P021 101 aa6.02□□□□□ -1.45
SMPD4-205ENST00000431183 A8MUU9 505 aa5.97□□□□□ -1.45
SMPD4-205ENST00000431183 C20orf166-AS1Q96NR2 134 aa5.97□□□□□ -1.45
SMPD4-205ENST00000431183 RPL37P61927 97 aaKnown RBP5.94□□□□□ -1.46
SMPD4-205ENST00000431183 RNF213Q63HN8 5207 aa5.93□□□□□ -1.46
SMPD4-205ENST00000431183 ROMO1P60602 79 aa5.93□□□□□ -1.46
SMPD4-205ENST00000431183 COX6B2Q6YFQ2 88 aa5.9□□□□□ -1.46
SMPD4-205ENST00000431183 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
SMPD4-205ENST00000431183 UBR4Q5T4S7 5183 aa5.86□□□□□ -1.47
SMPD4-205ENST00000431183 TPRXLQ17RH7 258 aa5.85□□□□□ -1.47
SMPD4-205ENST00000431183 SEC61BP60468 96 aaKnown RBP5.81□□□□□ -1.48
SMPD4-205ENST00000431183 H0YAA0 97 aa5.81□□□□□ -1.48
SMPD4-205ENST00000431183 SPINT4Q6UDR6 99 aa5.79□□□□□ -1.48
SMPD4-205ENST00000431183 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
SMPD4-205ENST00000431183 P0C880 135 aa5.78□□□□□ -1.48
SMPD4-205ENST00000431183 FAT4Q6V0I7 4981 aa5.76□□□□□ -1.49
SMPD4-205ENST00000431183 A0A1B0GU33 70 aa5.76□□□□□ -1.49
SMPD4-205ENST00000431183 KRTAP4-1Q9BYQ7 146 aa5.73□□□□□ -1.49
SMPD4-205ENST00000431183 K7ERS5 55 aa5.72□□□□□ -1.49
SMPD4-205ENST00000431183 S4R3F8 94 aa5.72□□□□□ -1.49
SMPD4-205ENST00000431183 NDUFAF8A1L188 74 aa5.7□□□□□ -1.5
SMPD4-205ENST00000431183 M0R2T5 61 aa5.7□□□□□ -1.5
SMPD4-205ENST00000431183 H1FX-AS1Q4G0G2 97 aa5.69□□□□□ -1.5
SMPD4-205ENST00000431183 HMCN2Q8NDA2 5059 aa5.67□□□□□ -1.5
SMPD4-205ENST00000431183 A0A0D9SG42 100 aa5.67□□□□□ -1.5
SMPD4-205ENST00000431183 C10orf95Q9H7T3 257 aa5.6□□□□□ -1.51
SMPD4-205ENST00000431183 A0A0A0MQY5 61 aa5.56□□□□□ -1.52
SMPD4-205ENST00000431183 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
SMPD4-205ENST00000431183 M0QZ58 72 aa5.43□□□□□ -1.54
SMPD4-205ENST00000431183 KRTAP13-4Q3LI77 160 aa5.42□□□□□ -1.54
SMPD4-205ENST00000431183 R4GN34 69 aa5.42□□□□□ -1.54
SMPD4-205ENST00000431183 MUC17Q685J3 4493 aa5.42□□□□□ -1.54
SMPD4-205ENST00000431183 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.54
SMPD4-205ENST00000431183 FSIP2Q5CZC0 6907 aa5.38□□□□□ -1.55
SMPD4-205ENST00000431183 LORP23490 312 aaPredicted RBP5.37□□□□□ -1.55
SMPD4-205ENST00000431183 KRTAP10-6P60371 365 aaPredicted RBP5.36□□□□□ -1.55
SMPD4-205ENST00000431183 KRTAP3-2Q9BYR7 98 aa5.33□□□□□ -1.56
SMPD4-205ENST00000431183 LUZP6Q538Z0 58 aa5.32□□□□□ -1.56
SMPD4-205ENST00000431183 KRTAP10-10P60014 251 aa5.3□□□□□ -1.56
SMPD4-205ENST00000431183 KRTAP12-2P59991 146 aa5.29□□□□□ -1.56
SMPD4-205ENST00000431183 KRTAP19-2Q3LHN2 52 aa5.24□□□□□ -1.57
SMPD4-205ENST00000431183 MT1HP80294 61 aa5.23□□□□□ -1.57
SMPD4-205ENST00000431183 LCE2CQ5TA81 110 aa5.23□□□□□ -1.57
SMPD4-205ENST00000431183 CAMK2N1Q7Z7J9 78 aa5.21□□□□□ -1.58
SMPD4-205ENST00000431183 FLGP20930 4061 aaPredicted RBP5.2□□□□□ -1.58
SMPD4-205ENST00000431183 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
SMPD4-205ENST00000431183 USH2AO75445 5202 aa5.16□□□□□ -1.58
SMPD4-205ENST00000431183 PLAC4Q8WY50 150 aa5.09□□□□□ -1.6
SMPD4-205ENST00000431183 MT1FP04733 61 aa5.08□□□□□ -1.6
SMPD4-205ENST00000431183 MT2AP02795 61 aa5.05□□□□□ -1.6
SMPD4-205ENST00000431183 KRTAP9-8Q9BYQ0 159 aa4.97□□□□□ -1.61
SMPD4-205ENST00000431183 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
SMPD4-205ENST00000431183 LCE2AQ5TA79 106 aaPredicted RBP4.8□□□□□ -1.64
SMPD4-205ENST00000431183 KMT2DO14686 5537 aa4.79□□□□□ -1.64
SMPD4-205ENST00000431183 SPRR2GQ9BYE4 73 aa4.78□□□□□ -1.64
SMPD4-205ENST00000431183 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
SMPD4-205ENST00000431183 LCE2BO14633 110 aa4.76□□□□□ -1.65
SMPD4-205ENST00000431183 TNP1P09430 55 aa4.73□□□□□ -1.65
SMPD4-205ENST00000431183 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
SMPD4-205ENST00000431183 MT1BP07438 61 aa4.71□□□□□ -1.66
SMPD4-205ENST00000431183 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
SMPD4-205ENST00000431183 PRO2289Q9P1D8 64 aa4.59□□□□□ -1.67
SMPD4-205ENST00000431183 MT1XP80297 61 aa4.59□□□□□ -1.68
SMPD4-205ENST00000431183 KRTAP19-8Q3LI54 63 aa4.59□□□□□ -1.68
SMPD4-205ENST00000431183 KRTAP10-5P60370 271 aa4.57□□□□□ -1.68
SMPD4-205ENST00000431183 KRTAP10-7P60409 375 aaPredicted RBP4.57□□□□□ -1.68
SMPD4-205ENST00000431183 LCE3AQ5TA76 89 aa4.55□□□□□ -1.68
SMPD4-205ENST00000431183 KRTAP4-8A0A0G2JLE6 195 aa4.53□□□□□ -1.68
SMPD4-205ENST00000431183 KRTAP4-8Q9BYQ9 185 aa4.53□□□□□ -1.68
SMPD4-205ENST00000431183 KRTAP10-12P60413 245 aa4.49□□□□□ -1.69
SMPD4-205ENST00000431183 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
SMPD4-205ENST00000431183 FCGBPQ9Y6R7 5405 aaPredicted RBP4.43□□□□□ -1.7
SMPD4-205ENST00000431183 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
SMPD4-205ENST00000431183 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
SMPD4-205ENST00000431183 KRTAP9-2Q9BYQ4 174 aa4.41□□□□□ -1.7
SMPD4-205ENST00000431183 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
SMPD4-205ENST00000431183 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
SMPD4-205ENST00000431183 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
SMPD4-205ENST00000431183 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
SMPD4-205ENST00000431183 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
SMPD4-205ENST00000431183 INE1O15225 51 aa4.29□□□□□ -1.72
SMPD4-205ENST00000431183 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
SMPD4-205ENST00000431183 CRCT1Q9UGL9 99 aa4.24□□□□□ -1.73
SMPD4-205ENST00000431183 KRTAP19-6Q3LI70 58 aa4.22□□□□□ -1.73
SMPD4-205ENST00000431183 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
SMPD4-205ENST00000431183 LCE2DQ5TA82 110 aaPredicted RBP4.19□□□□□ -1.74
SMPD4-205ENST00000431183 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms