RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 LOC101927531A0A1B0GV80 90 aa6.47□□□□□ -1.37
MSH5-208ENST00000429846 A0A1B0GV90 55 aa6.47□□□□□ -1.37
MSH5-208ENST00000429846 COL5A1-AS1Q5SY13 56 aa6.47□□□□□ -1.37
MSH5-208ENST00000429846 KMT2DO14686 5537 aa6.47□□□□□ -1.37
MSH5-208ENST00000429846 A0A087WVE0 104 aa6.43□□□□□ -1.38
MSH5-208ENST00000429846 H0YAA0 97 aa6.43□□□□□ -1.38
MSH5-208ENST00000429846 MDN1Q9NU22 5596 aa6.43□□□□□ -1.38
MSH5-208ENST00000429846 NDUFC1O43677 76 aa6.39□□□□□ -1.39
MSH5-208ENST00000429846 GTF2H5Q6ZYL4 71 aa6.39□□□□□ -1.39
MSH5-208ENST00000429846 F8W1H4 67 aa6.38□□□□□ -1.39
MSH5-208ENST00000429846 ETDBQ3ZM63 59 aa6.36□□□□□ -1.39
MSH5-208ENST00000429846 PRO2289Q9P1D8 64 aa6.35□□□□□ -1.39
MSH5-208ENST00000429846 ATOX1O00244 68 aa6.34□□□□□ -1.39
MSH5-208ENST00000429846 A8MUN3 132 aa6.32□□□□□ -1.4
MSH5-208ENST00000429846 UQCRQO14949 82 aa6.32□□□□□ -1.4
MSH5-208ENST00000429846 KRTAP2-3P0C7H8 128 aa6.31□□□□□ -1.4
MSH5-208ENST00000429846 ATP5EP2Q5VTU8 51 aa6.31□□□□□ -1.4
MSH5-208ENST00000429846 KRTAP2-4Q9BYR9 128 aa6.31□□□□□ -1.4
MSH5-208ENST00000429846 H0Y9P7 68 aa6.3□□□□□ -1.4
MSH5-208ENST00000429846 ACYP1P07311 99 aa6.3□□□□□ -1.4
MSH5-208ENST00000429846 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
MSH5-208ENST00000429846 ADM2Q7Z4H4 148 aa6.29□□□□□ -1.4
MSH5-208ENST00000429846 SPRR2FQ96RM1 72 aa6.29□□□□□ -1.4
MSH5-208ENST00000429846 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
MSH5-208ENST00000429846 MT1XP80297 61 aa6.26□□□□□ -1.41
MSH5-208ENST00000429846 FAM240AA0A1B0GVK7 77 aa6.25□□□□□ -1.41
MSH5-208ENST00000429846 SPRR2EP22531 72 aa6.25□□□□□ -1.41
MSH5-208ENST00000429846 SPRR2BP35325 72 aa6.25□□□□□ -1.41
MSH5-208ENST00000429846 SPRR2AP35326 72 aa6.25□□□□□ -1.41
MSH5-208ENST00000429846 HIST1H4AP62805 103 aaKnown RBP6.25□□□□□ -1.41
MSH5-208ENST00000429846 PLAC4Q8WY50 150 aa6.24□□□□□ -1.41
MSH5-208ENST00000429846 PCP4P48539 62 aa6.22□□□□□ -1.41
MSH5-208ENST00000429846 KRTAP8-1Q8IUC2 63 aa6.21□□□□□ -1.42
MSH5-208ENST00000429846 KRTAP12-2P59991 146 aa6.2□□□□□ -1.42
MSH5-208ENST00000429846 R4GN34 69 aa6.19□□□□□ -1.42
MSH5-208ENST00000429846 C20orf197Q8N268 126 aa6.18□□□□□ -1.42
MSH5-208ENST00000429846 LINC00208Q96KT6 92 aa6.17□□□□□ -1.42
MSH5-208ENST00000429846 MP68P56378 58 aa6.14□□□□□ -1.43
MSH5-208ENST00000429846 LCE1AQ5T7P2 110 aa6.13□□□□□ -1.43
MSH5-208ENST00000429846 K7ERU9 68 aa6.12□□□□□ -1.43
MSH5-208ENST00000429846 M0QZ58 72 aa6.11□□□□□ -1.43
MSH5-208ENST00000429846 P0C880 135 aa6.11□□□□□ -1.43
MSH5-208ENST00000429846 LINC00643Q86TS7 51 aa6.1□□□□□ -1.43
MSH5-208ENST00000429846 KRTAP2-2Q9BYT5 123 aa6.1□□□□□ -1.43
MSH5-208ENST00000429846 KRTAP2-1Q9BYU5 128 aa6.1□□□□□ -1.43
MSH5-208ENST00000429846 OCR1Q9BZK8 76 aa6.09□□□□□ -1.43
MSH5-208ENST00000429846 SPRR2DP22532 72 aa6.05□□□□□ -1.44
MSH5-208ENST00000429846 H3BPC8 53 aa6.04□□□□□ -1.44
MSH5-208ENST00000429846 DMAC1Q96GE9 116 aa6.04□□□□□ -1.44
MSH5-208ENST00000429846 SCGB1A1P11684 91 aa6.03□□□□□ -1.44
MSH5-208ENST00000429846 KRTAP4-8A0A0G2JLE6 195 aa6.02□□□□□ -1.45
MSH5-208ENST00000429846 KRTAP4-8Q9BYQ9 185 aa6.02□□□□□ -1.45
MSH5-208ENST00000429846 LINC01554Q52M75 96 aa6.01□□□□□ -1.45
MSH5-208ENST00000429846 J3QR89 54 aa5.96□□□□□ -1.46
MSH5-208ENST00000429846 KRTAP10-12P60413 245 aa5.96□□□□□ -1.46
MSH5-208ENST00000429846 KRTAP10-7P60409 375 aaPredicted RBP5.95□□□□□ -1.46
MSH5-208ENST00000429846 TRAV7A0A075B6U4 112 aa5.93□□□□□ -1.46
MSH5-208ENST00000429846 LCE3BQ5TA77 95 aa5.9□□□□□ -1.46
MSH5-208ENST00000429846 MT-ATP8P03928 68 aa5.88□□□□□ -1.47
MSH5-208ENST00000429846 SVIPQ8NHG7 77 aa5.87□□□□□ -1.47
MSH5-208ENST00000429846 ACYP2P14621 99 aa5.85□□□□□ -1.47
MSH5-208ENST00000429846 SPTSSBQ8NFR3 76 aa5.85□□□□□ -1.47
MSH5-208ENST00000429846 CHKB-CPT1BH3BT56 60 aa5.74□□□□□ -1.49
MSH5-208ENST00000429846 SMIM20Q8N5G0 67 aa5.69□□□□□ -1.5
MSH5-208ENST00000429846 ANAPC13Q9BS18 74 aa5.66□□□□□ -1.5
MSH5-208ENST00000429846 CAMK2N1Q7Z7J9 78 aa5.65□□□□□ -1.5
MSH5-208ENST00000429846 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
MSH5-208ENST00000429846 DSTQ03001 7570 aaKnown RBP5.62□□□□□ -1.51
MSH5-208ENST00000429846 KRTAP13-4Q3LI77 160 aa5.61□□□□□ -1.51
MSH5-208ENST00000429846 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
MSH5-208ENST00000429846 KRTAP19-3Q7Z4W3 81 aa5.58□□□□□ -1.52
MSH5-208ENST00000429846 MT1EP04732 61 aa5.57□□□□□ -1.52
MSH5-208ENST00000429846 SPANXA2-OT1Q8N9U9 137 aa5.57□□□□□ -1.52
MSH5-208ENST00000429846 SNURFQ9Y675 71 aa5.54□□□□□ -1.52
MSH5-208ENST00000429846 GPR98Q8WXG9 6306 aa5.54□□□□□ -1.52
MSH5-208ENST00000429846 CCDC179H3BU77 68 aa5.51□□□□□ -1.53
MSH5-208ENST00000429846 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
MSH5-208ENST00000429846 CYSTM1Q9H1C7 97 aa5.47□□□□□ -1.53
MSH5-208ENST00000429846 A0A0D9SG42 100 aa5.43□□□□□ -1.54
MSH5-208ENST00000429846 MT1GP13640 62 aa5.43□□□□□ -1.54
MSH5-208ENST00000429846 SEC61GP60059 68 aa5.43□□□□□ -1.54
MSH5-208ENST00000429846 COX7CP15954 63 aa5.42□□□□□ -1.54
MSH5-208ENST00000429846 RPS28P62857 69 aaKnown RBP5.42□□□□□ -1.54
MSH5-208ENST00000429846 PP632Q6XCG6 107 aa5.42□□□□□ -1.54
MSH5-208ENST00000429846 SERP1Q9Y6X1 66 aa5.42□□□□□ -1.54
MSH5-208ENST00000429846 COA5Q86WW8 74 aa5.4□□□□□ -1.54
MSH5-208ENST00000429846 TMEM258P61165 79 aa5.39□□□□□ -1.55
MSH5-208ENST00000429846 KRTAP19-5Q3LI72 72 aa5.39□□□□□ -1.55
MSH5-208ENST00000429846 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
MSH5-208ENST00000429846 SERP2Q8N6R1 65 aa5.39□□□□□ -1.55
MSH5-208ENST00000429846 SPINT4Q6UDR6 99 aa5.37□□□□□ -1.55
MSH5-208ENST00000429846 SPATA8Q6RVD6 105 aa5.36□□□□□ -1.55
MSH5-208ENST00000429846 KRTAP4-12Q9BQ66 201 aa5.36□□□□□ -1.55
MSH5-208ENST00000429846 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
MSH5-208ENST00000429846 A0A1B0GU33 70 aa5.33□□□□□ -1.56
MSH5-208ENST00000429846 KRTAP12-1P59990 96 aa5.32□□□□□ -1.56
MSH5-208ENST00000429846 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
MSH5-208ENST00000429846 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
MSH5-208ENST00000429846 MT1MQ8N339 61 aa5.31□□□□□ -1.56
MSH5-208ENST00000429846 MT4P47944 62 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms