RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 CAMK2N1Q7Z7J9 78 aa2.36□□□□□ -2.03
R3HDM1-206ENST00000429703 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
R3HDM1-206ENST00000429703 KRTAP10-11P60412 298 aa2.36□□□□□ -2.03
R3HDM1-206ENST00000429703 RYR3Q15413 4870 aa2.36□□□□□ -2.03
R3HDM1-206ENST00000429703 SACSQ9NZJ4 4579 aa2.36□□□□□ -2.03
R3HDM1-206ENST00000429703 A0A1B0GU33 70 aa2.36□□□□□ -2.03
R3HDM1-206ENST00000429703 DEFB135Q30KP9 77 aa2.35□□□□□ -2.03
R3HDM1-206ENST00000429703 DNAH2Q9P225 4427 aa2.35□□□□□ -2.03
R3HDM1-206ENST00000429703 FAT2Q9NYQ8 4349 aa2.34□□□□□ -2.03
R3HDM1-206ENST00000429703 DNAH11Q96DT5 4516 aa2.33□□□□□ -2.04
R3HDM1-206ENST00000429703 PLECQ15149 4684 aaKnown RBP2.33□□□□□ -2.04
R3HDM1-206ENST00000429703 PCLOQ9Y6V0 5065 aa2.33□□□□□ -2.04
R3HDM1-206ENST00000429703 KMT2CQ8NEZ4 4911 aaKnown RBP2.33□□□□□ -2.04
R3HDM1-206ENST00000429703 STARD9Q9P2P6 4700 aa2.32□□□□□ -2.04
R3HDM1-206ENST00000429703 SPINK1P00995 79 aa2.32□□□□□ -2.04
R3HDM1-206ENST00000429703 KRTAP13-4Q3LI77 160 aa2.32□□□□□ -2.04
R3HDM1-206ENST00000429703 COX6B2Q6YFQ2 88 aa2.32□□□□□ -2.04
R3HDM1-206ENST00000429703 TENM3Q9P273 2699 aa2.32□□□□□ -2.04
R3HDM1-206ENST00000429703 LINC01556Q5JQF7 62 aa2.32□□□□□ -2.04
R3HDM1-206ENST00000429703 PKHD1L1Q86WI1 4243 aa2.31□□□□□ -2.04
R3HDM1-206ENST00000429703 HERC2O95714 4834 aa2.29□□□□□ -2.04
R3HDM1-206ENST00000429703 C14orf177Q52M58 125 aa2.29□□□□□ -2.04
R3HDM1-206ENST00000429703 KRTAP5-3Q6L8H2 238 aa2.29□□□□□ -2.04
R3HDM1-206ENST00000429703 STAB2Q8WWQ8 2551 aa2.29□□□□□ -2.04
R3HDM1-206ENST00000429703 DYNC1H1Q14204 4646 aaKnown RBP2.29□□□□□ -2.04
R3HDM1-206ENST00000429703 H3BNG1 76 aa2.28□□□□□ -2.04
R3HDM1-206ENST00000429703 KRTAP10-8P60410 259 aa2.28□□□□□ -2.04
R3HDM1-206ENST00000429703 VPS13BQ7Z7G8 4022 aa2.27□□□□□ -2.05
R3HDM1-206ENST00000429703 SPINK6Q6UWN8 80 aa2.27□□□□□ -2.05
R3HDM1-206ENST00000429703 KRTAP9-3Q9BYQ3 159 aa2.27□□□□□ -2.05
R3HDM1-206ENST00000429703 SPART-AS1P0CW21 52 aa2.26□□□□□ -2.05
R3HDM1-206ENST00000429703 KRTAP10-6P60371 365 aaPredicted RBP2.26□□□□□ -2.05
R3HDM1-206ENST00000429703 RPL37P61927 97 aaKnown RBP2.26□□□□□ -2.05
R3HDM1-206ENST00000429703 KRTAP4-11Q9BYQ6 195 aa2.26□□□□□ -2.05
R3HDM1-206ENST00000429703 KRTAP9-8Q9BYQ0 159 aa2.26□□□□□ -2.05
R3HDM1-206ENST00000429703 KRTAP4-5Q9BYR2 181 aa2.26□□□□□ -2.05
R3HDM1-206ENST00000429703 LCE5AQ5TCM9 118 aa2.26□□□□□ -2.05
R3HDM1-206ENST00000429703 PKD1P98161 4303 aa2.25□□□□□ -2.05
R3HDM1-206ENST00000429703 PKHD1P08F94 4074 aa2.25□□□□□ -2.05
R3HDM1-206ENST00000429703 KRTAP12-2P59991 146 aa2.24□□□□□ -2.05
R3HDM1-206ENST00000429703 HYDINQ4G0P3 5121 aa2.24□□□□□ -2.05
R3HDM1-206ENST00000429703 A0A1B0GVY2 172 aa2.24□□□□□ -2.05
R3HDM1-206ENST00000429703 EPPK1P58107 5090 aaKnown RBP2.23□□□□□ -2.05
R3HDM1-206ENST00000429703 SPACA4Q8TDM5 124 aa2.22□□□□□ -2.05
R3HDM1-206ENST00000429703 S4R3F8 94 aa2.21□□□□□ -2.05
R3HDM1-206ENST00000429703 PLAC4Q8WY50 150 aa2.21□□□□□ -2.06
R3HDM1-206ENST00000429703 KRTAP1-5Q9BYS1 174 aa2.21□□□□□ -2.06
R3HDM1-206ENST00000429703 APLNQ9ULZ1 77 aa2.2□□□□□ -2.06
R3HDM1-206ENST00000429703 RYR1P21817 5038 aa2.19□□□□□ -2.06
R3HDM1-206ENST00000429703 A0A0D9SG42 100 aa2.19□□□□□ -2.06
R3HDM1-206ENST00000429703 PRO2289Q9P1D8 64 aa2.19□□□□□ -2.06
R3HDM1-206ENST00000429703 R4GN34 69 aa2.19□□□□□ -2.06
R3HDM1-206ENST00000429703 KIAA1109Q2LD37 5005 aa2.19□□□□□ -2.06
R3HDM1-206ENST00000429703 KRTAP12-1P59990 96 aa2.18□□□□□ -2.06
R3HDM1-206ENST00000429703 Q6ZRN7 208 aaPredicted RBP2.18□□□□□ -2.06
R3HDM1-206ENST00000429703 APOBP04114 4563 aaKnown RBP2.17□□□□□ -2.06
R3HDM1-206ENST00000429703 UBE2DNLQ8IWF7 75 aa2.17□□□□□ -2.06
R3HDM1-206ENST00000429703 UBR4Q5T4S7 5183 aa2.16□□□□□ -2.06
R3HDM1-206ENST00000429703 DNAH5Q8TE73 4624 aa2.16□□□□□ -2.06
R3HDM1-206ENST00000429703 FAT3Q8TDW7 4589 aa2.15□□□□□ -2.07
R3HDM1-206ENST00000429703 HSPG2P98160 4391 aa2.15□□□□□ -2.07
R3HDM1-206ENST00000429703 LRP1BQ9NZR2 4599 aa2.14□□□□□ -2.07
R3HDM1-206ENST00000429703 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
R3HDM1-206ENST00000429703 KRTAP13-2Q52LG2 175 aa2.13□□□□□ -2.07
R3HDM1-206ENST00000429703 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
R3HDM1-206ENST00000429703 FAT1Q14517 4588 aa2.1□□□□□ -2.07
R3HDM1-206ENST00000429703 ABCA13Q86UQ4 5058 aa2.1□□□□□ -2.07
R3HDM1-206ENST00000429703 TNXBP22105 4242 aa2.09□□□□□ -2.08
R3HDM1-206ENST00000429703 LRP1Q07954 4544 aaKnown RBP2.09□□□□□ -2.08
R3HDM1-206ENST00000429703 KRTAP10-4P60372 401 aaPredicted RBP2.05□□□□□ -2.08
R3HDM1-206ENST00000429703 LCE1AQ5T7P2 110 aa2.04□□□□□ -2.08
R3HDM1-206ENST00000429703 CRCT1Q9UGL9 99 aa2.04□□□□□ -2.08
R3HDM1-206ENST00000429703 KRTAP1-4P0C5Y4 121 aa2.03□□□□□ -2.08
R3HDM1-206ENST00000429703 INE1O15225 51 aa2.03□□□□□ -2.08
R3HDM1-206ENST00000429703 LPAP08519 4548 aa2.03□□□□□ -2.08
R3HDM1-206ENST00000429703 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
R3HDM1-206ENST00000429703 C9orf92A6NGG3 77 aa2.01□□□□□ -2.09
R3HDM1-206ENST00000429703 KRTAP10-1P60331 282 aa1.98□□□□□ -2.09
R3HDM1-206ENST00000429703 MUC17Q685J3 4493 aa1.98□□□□□ -2.09
R3HDM1-206ENST00000429703 HMCN2Q8NDA2 5059 aa1.98□□□□□ -2.09
R3HDM1-206ENST00000429703 Q5VSD8 79 aa1.98□□□□□ -2.09
R3HDM1-206ENST00000429703 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
R3HDM1-206ENST00000429703 MT3P25713 68 aa1.95□□□□□ -2.1
R3HDM1-206ENST00000429703 M0QZ58 72 aa1.95□□□□□ -2.1
R3HDM1-206ENST00000429703 MT1HL1P0DM35 61 aa1.95□□□□□ -2.1
R3HDM1-206ENST00000429703 PP632Q6XCG6 107 aa1.94□□□□□ -2.1
R3HDM1-206ENST00000429703 HERC1Q15751 4861 aa1.94□□□□□ -2.1
R3HDM1-206ENST00000429703 SMR3BP02814 79 aaPredicted RBP1.93□□□□□ -2.1
R3HDM1-206ENST00000429703 FLGP20930 4061 aaPredicted RBP1.92□□□□□ -2.1
R3HDM1-206ENST00000429703 RPS29P62273 56 aaKnown RBP1.92□□□□□ -2.1
R3HDM1-206ENST00000429703 MUC2Q02817 5179 aa1.9□□□□□ -2.11
R3HDM1-206ENST00000429703 FAT4Q6V0I7 4981 aa1.88□□□□□ -2.11
R3HDM1-206ENST00000429703 LCE1FQ5T754 118 aa1.88□□□□□ -2.11
R3HDM1-206ENST00000429703 KRTAP2-2Q9BYT5 123 aa1.85□□□□□ -2.11
R3HDM1-206ENST00000429703 RNF213Q63HN8 5207 aa1.84□□□□□ -2.12
R3HDM1-206ENST00000429703 KRTAP10-10P60014 251 aa1.82□□□□□ -2.12
R3HDM1-206ENST00000429703 LRP2P98164 4655 aa1.81□□□□□ -2.12
R3HDM1-206ENST00000429703 OBSCNQ5VST9 7968 aa1.79□□□□□ -2.12
R3HDM1-206ENST00000429703 KRTAP20-1Q3LI63 56 aa1.79□□□□□ -2.12
R3HDM1-206ENST00000429703 KRTAP10-12P60413 245 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms