RNA–Protein interactions for RNA: ENST00000429553.5

SH2D3C-206, Transcript of SH2 domain containing 3C, humanhuman

TSL 1 (best) BASIC

Gene SH2D3C, Length 2,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-206ENST00000429553 KRTAP10-6P60371 365 aaPredicted RBP7.92□□□□□ -1.14
SH2D3C-206ENST00000429553 KMT2CQ8NEZ4 4911 aaKnown RBP7.9□□□□□ -1.15
SH2D3C-206ENST00000429553 RYR2Q92736 4967 aa7.89□□□□□ -1.15
SH2D3C-206ENST00000429553 DYNC1H1Q14204 4646 aaKnown RBP7.82□□□□□ -1.16
SH2D3C-206ENST00000429553 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
SH2D3C-206ENST00000429553 A0A1B0GVY2 172 aa7.8□□□□□ -1.16
SH2D3C-206ENST00000429553 S4R3F8 94 aa7.79□□□□□ -1.16
SH2D3C-206ENST00000429553 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
SH2D3C-206ENST00000429553 KRTAP3-3Q9BYR6 98 aa7.77□□□□□ -1.16
SH2D3C-206ENST00000429553 APOBP04114 4563 aaKnown RBP7.76□□□□□ -1.17
SH2D3C-206ENST00000429553 RYR3Q15413 4870 aa7.69□□□□□ -1.18
SH2D3C-206ENST00000429553 FAT1Q14517 4588 aa7.69□□□□□ -1.18
SH2D3C-206ENST00000429553 SMR3BP02814 79 aaPredicted RBP7.67□□□□□ -1.18
SH2D3C-206ENST00000429553 RPS29P62273 56 aaKnown RBP7.65□□□□□ -1.18
SH2D3C-206ENST00000429553 LUZP6Q538Z0 58 aa7.65□□□□□ -1.18
SH2D3C-206ENST00000429553 XP32Q5T750 250 aa7.64□□□□□ -1.19
SH2D3C-206ENST00000429553 KRTAP12-1P59990 96 aa7.63□□□□□ -1.19
SH2D3C-206ENST00000429553 KRTAP10-4P60372 401 aaPredicted RBP7.59□□□□□ -1.19
SH2D3C-206ENST00000429553 HSPG2P98160 4391 aa7.56□□□□□ -1.2
SH2D3C-206ENST00000429553 PKHD1L1Q86WI1 4243 aa7.55□□□□□ -1.2
SH2D3C-206ENST00000429553 KRTAP10-8P60410 259 aa7.54□□□□□ -1.2
SH2D3C-206ENST00000429553 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
SH2D3C-206ENST00000429553 RYR1P21817 5038 aa7.44□□□□□ -1.22
SH2D3C-206ENST00000429553 TNXBP22105 4242 aa7.41□□□□□ -1.22
SH2D3C-206ENST00000429553 EPPK1P58107 5090 aaKnown RBP7.41□□□□□ -1.22
SH2D3C-206ENST00000429553 Q5VSD8 79 aa7.4□□□□□ -1.22
SH2D3C-206ENST00000429553 LRP1Q07954 4544 aaKnown RBP7.4□□□□□ -1.23
SH2D3C-206ENST00000429553 KRTAP17-1Q9BYP8 105 aa7.38□□□□□ -1.23
SH2D3C-206ENST00000429553 KIAA1109Q2LD37 5005 aa7.37□□□□□ -1.23
SH2D3C-206ENST00000429553 MYCBP2O75592 4640 aa7.35□□□□□ -1.23
SH2D3C-206ENST00000429553 FAT3Q8TDW7 4589 aa7.32□□□□□ -1.24
SH2D3C-206ENST00000429553 M0QZ58 72 aa7.29□□□□□ -1.24
SH2D3C-206ENST00000429553 LPAP08519 4548 aa7.18□□□□□ -1.26
SH2D3C-206ENST00000429553 MT1HL1P0DM35 61 aa7.15□□□□□ -1.26
SH2D3C-206ENST00000429553 KRTAP4-5Q9BYR2 181 aa7.11□□□□□ -1.27
SH2D3C-206ENST00000429553 R4GN34 69 aa7.09□□□□□ -1.27
SH2D3C-206ENST00000429553 ABCA13Q86UQ4 5058 aa7.02□□□□□ -1.29
SH2D3C-206ENST00000429553 LORP23490 312 aaPredicted RBP7□□□□□ -1.29
SH2D3C-206ENST00000429553 BIRC6Q9NR09 4857 aa6.97□□□□□ -1.29
SH2D3C-206ENST00000429553 LRP2P98164 4655 aa6.97□□□□□ -1.29
SH2D3C-206ENST00000429553 HERC2O95714 4834 aa6.94□□□□□ -1.3
SH2D3C-206ENST00000429553 PP632Q6XCG6 107 aa6.92□□□□□ -1.3
SH2D3C-206ENST00000429553 SEC61BP60468 96 aaKnown RBP6.91□□□□□ -1.3
SH2D3C-206ENST00000429553 CAMK2N1Q7Z7J9 78 aa6.83□□□□□ -1.32
SH2D3C-206ENST00000429553 J3QL48 77 aa6.82□□□□□ -1.32
SH2D3C-206ENST00000429553 SPRR5A0A1B0GTR4 108 aa6.75□□□□□ -1.33
SH2D3C-206ENST00000429553 PCLOQ9Y6V0 5065 aa6.74□□□□□ -1.33
SH2D3C-206ENST00000429553 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.35
SH2D3C-206ENST00000429553 HERC1Q15751 4861 aa6.64□□□□□ -1.35
SH2D3C-206ENST00000429553 MUC17Q685J3 4493 aa6.61□□□□□ -1.35
SH2D3C-206ENST00000429553 TNP1P09430 55 aa6.58□□□□□ -1.36
SH2D3C-206ENST00000429553 HMCN2Q8NDA2 5059 aa6.55□□□□□ -1.36
SH2D3C-206ENST00000429553 KRTAP4-1Q9BYQ7 146 aa6.54□□□□□ -1.36
SH2D3C-206ENST00000429553 MUC2Q02817 5179 aa6.5□□□□□ -1.37
SH2D3C-206ENST00000429553 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.38
SH2D3C-206ENST00000429553 INE1O15225 51 aa6.39□□□□□ -1.39
SH2D3C-206ENST00000429553 KRTAP19-2Q3LHN2 52 aa6.38□□□□□ -1.39
SH2D3C-206ENST00000429553 FLGP20930 4061 aaPredicted RBP6.29□□□□□ -1.4
SH2D3C-206ENST00000429553 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
SH2D3C-206ENST00000429553 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
SH2D3C-206ENST00000429553 RNF213Q63HN8 5207 aa6.22□□□□□ -1.41
SH2D3C-206ENST00000429553 FAT4Q6V0I7 4981 aa6.19□□□□□ -1.42
SH2D3C-206ENST00000429553 LCE2CQ5TA81 110 aa6.16□□□□□ -1.42
SH2D3C-206ENST00000429553 MT1HP80294 61 aa6.01□□□□□ -1.45
SH2D3C-206ENST00000429553 KRTAP8-1Q8IUC2 63 aa5.98□□□□□ -1.45
SH2D3C-206ENST00000429553 M0R2T5 61 aa5.95□□□□□ -1.46
SH2D3C-206ENST00000429553 KRTAP19-1Q8IUB9 90 aa5.95□□□□□ -1.46
SH2D3C-206ENST00000429553 SPRR2GQ9BYE4 73 aa5.93□□□□□ -1.46
SH2D3C-206ENST00000429553 KRTAP10-12P60413 245 aa5.91□□□□□ -1.46
SH2D3C-206ENST00000429553 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
SH2D3C-206ENST00000429553 KRTAP9-8Q9BYQ0 159 aa5.82□□□□□ -1.48
SH2D3C-206ENST00000429553 MT2AP02795 61 aa5.81□□□□□ -1.48
SH2D3C-206ENST00000429553 MT1FP04733 61 aa5.8□□□□□ -1.48
SH2D3C-206ENST00000429553 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
SH2D3C-206ENST00000429553 KRTAP10-5P60370 271 aa5.69□□□□□ -1.5
SH2D3C-206ENST00000429553 MT1XP80297 61 aa5.66□□□□□ -1.5
SH2D3C-206ENST00000429553 LCE2AQ5TA79 106 aaPredicted RBP5.63□□□□□ -1.51
SH2D3C-206ENST00000429553 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
SH2D3C-206ENST00000429553 KRTAP9-3Q9BYQ3 159 aa5.59□□□□□ -1.51
SH2D3C-206ENST00000429553 KRTAP19-8Q3LI54 63 aa5.57□□□□□ -1.52
SH2D3C-206ENST00000429553 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
SH2D3C-206ENST00000429553 MT1BP07438 61 aa5.54□□□□□ -1.52
SH2D3C-206ENST00000429553 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
SH2D3C-206ENST00000429553 KRTAP19-5Q3LI72 72 aa5.47□□□□□ -1.53
SH2D3C-206ENST00000429553 LCE2BO14633 110 aa5.43□□□□□ -1.54
SH2D3C-206ENST00000429553 KMT2DO14686 5537 aa5.43□□□□□ -1.54
SH2D3C-206ENST00000429553 KRTAP2-3P0C7H8 128 aa5.42□□□□□ -1.54
SH2D3C-206ENST00000429553 KRTAP2-4Q9BYR9 128 aa5.42□□□□□ -1.54
SH2D3C-206ENST00000429553 KRTAP2-1Q9BYU5 128 aa5.42□□□□□ -1.54
SH2D3C-206ENST00000429553 USH2AO75445 5202 aa5.38□□□□□ -1.55
SH2D3C-206ENST00000429553 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
SH2D3C-206ENST00000429553 KRTAP4-8A0A0G2JLE6 195 aa5.21□□□□□ -1.58
SH2D3C-206ENST00000429553 KRTAP4-8Q9BYQ9 185 aa5.21□□□□□ -1.58
SH2D3C-206ENST00000429553 SSPOA2VEC9 5147 aa5.13□□□□□ -1.59
SH2D3C-206ENST00000429553 FSIP2Q5CZC0 6907 aa5.09□□□□□ -1.6
SH2D3C-206ENST00000429553 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
SH2D3C-206ENST00000429553 KRTAP12-4P60329 112 aa5.03□□□□□ -1.6
SH2D3C-206ENST00000429553 KRTAP19-6Q3LI70 58 aa5□□□□□ -1.61
SH2D3C-206ENST00000429553 LCE2DQ5TA82 110 aaPredicted RBP4.99□□□□□ -1.61
SH2D3C-206ENST00000429553 KRTAP9-2Q9BYQ4 174 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms