RNA–Protein interactions for RNA: ENST00000428744.1

KIF3A-204, Transcript of kinesin family member 3A, humanhuman

TSL 5

Gene KIF3A, Length 658 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-204ENST00000428744 LAMA1P25391 3075 aa1.84□□□□□ -2.12
KIF3A-204ENST00000428744 ATMQ13315 3056 aa1.84□□□□□ -2.12
KIF3A-204ENST00000428744 PRRC2CQ9Y520 2896 aaKnown RBP1.83□□□□□ -2.12
KIF3A-204ENST00000428744 AKAP9Q99996 3911 aa1.83□□□□□ -2.12
KIF3A-204ENST00000428744 CSMD2Q7Z408 3487 aa1.82□□□□□ -2.12
KIF3A-204ENST00000428744 NSD1Q96L73 2696 aaPredicted RBP1.82□□□□□ -2.12
KIF3A-204ENST00000428744 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.82□□□□□ -2.12
KIF3A-204ENST00000428744 C10orf95Q9H7T3 257 aa1.82□□□□□ -2.12
KIF3A-204ENST00000428744 DCHS2Q6V1P9 2916 aa1.81□□□□□ -2.12
KIF3A-204ENST00000428744 SPINK1P00995 79 aa1.81□□□□□ -2.12
KIF3A-204ENST00000428744 LINC01556Q5JQF7 62 aa1.81□□□□□ -2.12
KIF3A-204ENST00000428744 MGAM2Q2M2H8 2515 aa1.81□□□□□ -2.12
KIF3A-204ENST00000428744 RYR2Q92736 4967 aa1.8□□□□□ -2.12
KIF3A-204ENST00000428744 CACNA1EQ15878 2313 aa1.8□□□□□ -2.12
KIF3A-204ENST00000428744 CSPG4Q6UVK1 2322 aa1.8□□□□□ -2.12
KIF3A-204ENST00000428744 A0A096LPF7 62 aa1.8□□□□□ -2.12
KIF3A-204ENST00000428744 APCP25054 2843 aa1.8□□□□□ -2.12
KIF3A-204ENST00000428744 ZANQ9Y493 2812 aa1.8□□□□□ -2.12
KIF3A-204ENST00000428744 CUBNO60494 3623 aa1.79□□□□□ -2.12
KIF3A-204ENST00000428744 SPART-AS1P0CW21 52 aa1.79□□□□□ -2.12
KIF3A-204ENST00000428744 S4R3F8 94 aa1.79□□□□□ -2.12
KIF3A-204ENST00000428744 HERC2O95714 4834 aa1.79□□□□□ -2.12
KIF3A-204ENST00000428744 NBASA2RRP1 2371 aa1.79□□□□□ -2.12
KIF3A-204ENST00000428744 BSNQ9UPA5 3926 aa1.79□□□□□ -2.12
KIF3A-204ENST00000428744 TENM2Q9NT68 2774 aa1.78□□□□□ -2.12
KIF3A-204ENST00000428744 KRTAP13-1Q8IUC0 172 aa1.78□□□□□ -2.12
KIF3A-204ENST00000428744 DEFB124Q8NES8 71 aa1.78□□□□□ -2.12
KIF3A-204ENST00000428744 APC2O95996 2303 aa1.77□□□□□ -2.13
KIF3A-204ENST00000428744 COL6A6A6NMZ7 2263 aa1.77□□□□□ -2.13
KIF3A-204ENST00000428744 TENM3Q9P273 2699 aa1.76□□□□□ -2.13
KIF3A-204ENST00000428744 MUC2Q02817 5179 aa1.76□□□□□ -2.13
KIF3A-204ENST00000428744 ACANP16112 2415 aa1.76□□□□□ -2.13
KIF3A-204ENST00000428744 MXRA5Q9NR99 2828 aa1.75□□□□□ -2.13
KIF3A-204ENST00000428744 APLNQ9ULZ1 77 aa1.75□□□□□ -2.13
KIF3A-204ENST00000428744 ACACAQ13085 2346 aa1.75□□□□□ -2.13
KIF3A-204ENST00000428744 A0A096LNI7 61 aa1.74□□□□□ -2.13
KIF3A-204ENST00000428744 VPS13CQ709C8 3753 aa1.74□□□□□ -2.13
KIF3A-204ENST00000428744 FLG2Q5D862 2391 aaPredicted RBP1.74□□□□□ -2.13
KIF3A-204ENST00000428744 ANK2Q01484 3957 aa1.74□□□□□ -2.13
KIF3A-204ENST00000428744 PKDREJQ9NTG1 2253 aa1.74□□□□□ -2.13
KIF3A-204ENST00000428744 AKAP6Q13023 2319 aa1.73□□□□□ -2.13
KIF3A-204ENST00000428744 HERC1Q15751 4861 aa1.72□□□□□ -2.13
KIF3A-204ENST00000428744 M0QZ58 72 aa1.72□□□□□ -2.13
KIF3A-204ENST00000428744 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
KIF3A-204ENST00000428744 SPINK6Q6UWN8 80 aa1.72□□□□□ -2.13
KIF3A-204ENST00000428744 KRTAP6-3Q3LI67 103 aa1.71□□□□□ -2.14
KIF3A-204ENST00000428744 MAP1AP78559 2803 aaPredicted RBP1.7□□□□□ -2.14
KIF3A-204ENST00000428744 KRTAP12-1P59990 96 aa1.7□□□□□ -2.14
KIF3A-204ENST00000428744 KRTAP13-4Q3LI77 160 aa1.7□□□□□ -2.14
KIF3A-204ENST00000428744 Q5VSD8 79 aa1.7□□□□□ -2.14
KIF3A-204ENST00000428744 A0A0D9SG42 100 aa1.69□□□□□ -2.14
KIF3A-204ENST00000428744 ABCA13Q86UQ4 5058 aa1.69□□□□□ -2.14
KIF3A-204ENST00000428744 PRKDCP78527 4128 aaKnown RBP1.68□□□□□ -2.14
KIF3A-204ENST00000428744 HTN3P15516 51 aa1.68□□□□□ -2.14
KIF3A-204ENST00000428744 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
KIF3A-204ENST00000428744 SVEP1Q4LDE5 3571 aa1.68□□□□□ -2.14
KIF3A-204ENST00000428744 TACC2O95359 2948 aa1.67□□□□□ -2.14
KIF3A-204ENST00000428744 SONP18583 2426 aaKnown RBP1.67□□□□□ -2.14
KIF3A-204ENST00000428744 DEFB135Q30KP9 77 aa1.65□□□□□ -2.15
KIF3A-204ENST00000428744 RPS29P62273 56 aaKnown RBP1.64□□□□□ -2.15
KIF3A-204ENST00000428744 ROS1P08922 2347 aa1.63□□□□□ -2.15
KIF3A-204ENST00000428744 DEFB4AO15263 64 aa1.62□□□□□ -2.15
KIF3A-204ENST00000428744 ZNF469Q96JG9 3925 aaPredicted RBP1.62□□□□□ -2.15
KIF3A-204ENST00000428744 COL7A1Q02388 2944 aa1.6□□□□□ -2.15
KIF3A-204ENST00000428744 KRTAP12-4P60329 112 aa1.6□□□□□ -2.15
KIF3A-204ENST00000428744 FSIP2Q5CZC0 6907 aa1.59□□□□□ -2.15
KIF3A-204ENST00000428744 DYNC2H1Q8NCM8 4307 aaKnown RBP1.59□□□□□ -2.15
KIF3A-204ENST00000428744 TRRAPQ9Y4A5 3859 aa1.59□□□□□ -2.16
KIF3A-204ENST00000428744 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.16
KIF3A-204ENST00000428744 FAT4Q6V0I7 4981 aa1.59□□□□□ -2.16
KIF3A-204ENST00000428744 SACSQ9NZJ4 4579 aa1.57□□□□□ -2.16
KIF3A-204ENST00000428744 DNAH1Q9P2D7 4330 aa1.56□□□□□ -2.16
KIF3A-204ENST00000428744 STAB2Q8WWQ8 2551 aa1.55□□□□□ -2.16
KIF3A-204ENST00000428744 RNF213Q63HN8 5207 aa1.54□□□□□ -2.16
KIF3A-204ENST00000428744 SMR3AQ99954 134 aa1.53□□□□□ -2.16
KIF3A-204ENST00000428744 CRCT1Q9UGL9 99 aa1.53□□□□□ -2.16
KIF3A-204ENST00000428744 GPR98Q8WXG9 6306 aa1.53□□□□□ -2.16
KIF3A-204ENST00000428744 TNP1P09430 55 aa1.52□□□□□ -2.17
KIF3A-204ENST00000428744 CMYA5Q8N3K9 4069 aa1.51□□□□□ -2.17
KIF3A-204ENST00000428744 DMBT1Q9UGM3 2413 aaPredicted RBP1.51□□□□□ -2.17
KIF3A-204ENST00000428744 HECTD4Q9Y4D8 3996 aa1.51□□□□□ -2.17
KIF3A-204ENST00000428744 C9orf92A6NGG3 77 aa1.5□□□□□ -2.17
KIF3A-204ENST00000428744 SRRM2Q9UQ35 2752 aaKnown RBP1.5□□□□□ -2.17
KIF3A-204ENST00000428744 FRAS1Q86XX4 4008 aa1.48□□□□□ -2.17
KIF3A-204ENST00000428744 ANK3Q12955 4377 aaKnown RBP1.47□□□□□ -2.17
KIF3A-204ENST00000428744 KMT2AQ03164 3969 aa1.46□□□□□ -2.18
KIF3A-204ENST00000428744 NEBP20929 6669 aa1.46□□□□□ -2.18
KIF3A-204ENST00000428744 HMCN2Q8NDA2 5059 aa1.45□□□□□ -2.18
KIF3A-204ENST00000428744 LYSTQ99698 3801 aa1.45□□□□□ -2.18
KIF3A-204ENST00000428744 VPS13DQ5THJ4 4388 aa1.45□□□□□ -2.18
KIF3A-204ENST00000428744 SSPOA2VEC9 5147 aa1.43□□□□□ -2.18
KIF3A-204ENST00000428744 SYNE2Q8WXH0 6885 aaKnown RBP1.43□□□□□ -2.18
KIF3A-204ENST00000428744 PKHD1P08F94 4074 aa1.43□□□□□ -2.18
KIF3A-204ENST00000428744 CSMD3Q7Z407 3707 aa1.42□□□□□ -2.18
KIF3A-204ENST00000428744 HRNRQ86YZ3 2850 aaPredicted RBP1.41□□□□□ -2.18
KIF3A-204ENST00000428744 HSPG2P98160 4391 aa1.38□□□□□ -2.19
KIF3A-204ENST00000428744 KRTAP4-1Q9BYQ7 146 aa1.38□□□□□ -2.19
KIF3A-204ENST00000428744 DNAH9Q9NYC9 4486 aa1.37□□□□□ -2.19
KIF3A-204ENST00000428744 MYCBP2O75592 4640 aa1.36□□□□□ -2.19
KIF3A-204ENST00000428744 DNAH11Q96DT5 4516 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms