RNA–Protein interactions for RNA: ENST00000428744.1

KIF3A-204, Transcript of kinesin family member 3A, humanhuman

TSL 5

Gene KIF3A, Length 658 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-204ENST00000428744 AEBP2Q6ZN18 517 aaPredicted RBP22.04■■□□□ 1.12
KIF3A-204ENST00000428744 CHIC1Q5VXU3 224 aa21.06■□□□□ 0.96
KIF3A-204ENST00000428744 SENP3Q9H4L4 574 aaPredicted RBP18.71■□□□□ 0.59
KIF3A-204ENST00000428744 PHF23Q9BUL5 403 aaPredicted RBP18.53■□□□□ 0.56
KIF3A-204ENST00000428744 FOXD1Q16676 465 aa17.46■□□□□ 0.39
KIF3A-204ENST00000428744 PLPPR3Q6T4P5 718 aa16.87■□□□□ 0.29
KIF3A-204ENST00000428744 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
KIF3A-204ENST00000428744 PPP6R1Q9UPN7 881 aa16.49■□□□□ 0.23
KIF3A-204ENST00000428744 MSH5O43196 834 aa16.47■□□□□ 0.23
KIF3A-204ENST00000428744 ADRA2BP18089 450 aa16.41■□□□□ 0.22
KIF3A-204ENST00000428744 PIAS4Q8N2W9 510 aaPredicted RBP16.3■□□□□ 0.2
KIF3A-204ENST00000428744 MAPK8IP2Q13387 824 aaPredicted RBP15.04■□□□□ -0
KIF3A-204ENST00000428744 SCAF1Q9H7N4 1312 aaKnown RBP14.96□□□□□ -0.01
KIF3A-204ENST00000428744 DMRT2Q9Y5R5 561 aa14.89□□□□□ -0.03
KIF3A-204ENST00000428744 PPP4R3CPQ6ZMV5 832 aa14.82□□□□□ -0.04
KIF3A-204ENST00000428744 CNKSR2Q8WXI2 1034 aa14.5□□□□□ -0.09
KIF3A-204ENST00000428744 HOXD11P31277 338 aaPredicted RBP14.43□□□□□ -0.1
KIF3A-204ENST00000428744 CACNB1Q02641 598 aaPredicted RBP14.37□□□□□ -0.11
KIF3A-204ENST00000428744 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
KIF3A-204ENST00000428744 NCBP3Q53F19 620 aaKnown RBP14.26□□□□□ -0.13
KIF3A-204ENST00000428744 DCAF8L1A6NGE4 600 aa14.17□□□□□ -0.14
KIF3A-204ENST00000428744 NPM3O75607 178 aaKnown RBP14.1□□□□□ -0.15
KIF3A-204ENST00000428744 KCNA4P22459 653 aa13.98□□□□□ -0.17
KIF3A-204ENST00000428744 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
KIF3A-204ENST00000428744 RNF39Q9H2S5 420 aa13.9□□□□□ -0.18
KIF3A-204ENST00000428744 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
KIF3A-204ENST00000428744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.67□□□□□ -0.22
KIF3A-204ENST00000428744 SLC4A2P04920 1241 aa13.46□□□□□ -0.25
KIF3A-204ENST00000428744 U3KPZ7 1027 aaPredicted RBP13.45□□□□□ -0.26
KIF3A-204ENST00000428744 SPINK5Q9NQ38 1064 aaPredicted RBP13.21□□□□□ -0.29
KIF3A-204ENST00000428744 SLC4A1APQ9BWU0 796 aaKnown RBP13.19□□□□□ -0.3
KIF3A-204ENST00000428744 CAPN15O75808 1086 aa13.12□□□□□ -0.31
KIF3A-204ENST00000428744 POTEHQ6S545 545 aa13.12□□□□□ -0.31
KIF3A-204ENST00000428744 DSG3P32926 999 aa13.08□□□□□ -0.32
KIF3A-204ENST00000428744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
KIF3A-204ENST00000428744 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
KIF3A-204ENST00000428744 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
KIF3A-204ENST00000428744 APLP2Q06481 763 aa13.01□□□□□ -0.33
KIF3A-204ENST00000428744 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
KIF3A-204ENST00000428744 FOXD4L1Q9NU39 408 aa12.96□□□□□ -0.33
KIF3A-204ENST00000428744 TRHP20396 242 aaPredicted RBP12.95□□□□□ -0.34
KIF3A-204ENST00000428744 ZNF219Q9P2Y4 722 aaPredicted RBP12.94□□□□□ -0.34
KIF3A-204ENST00000428744 ZBTB22O15209 634 aa12.88□□□□□ -0.35
KIF3A-204ENST00000428744 ABCB7O75027 752 aa12.84□□□□□ -0.35
KIF3A-204ENST00000428744 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
KIF3A-204ENST00000428744 POLA2Q14181 598 aa12.69□□□□□ -0.38
KIF3A-204ENST00000428744 ATXN8OSP0DMR3 200 aa12.58□□□□□ -0.4
KIF3A-204ENST00000428744 CSRNP3Q8WYN3 585 aa12.44□□□□□ -0.42
KIF3A-204ENST00000428744 RBM42Q9BTD8 480 aaKnown RBP12.42□□□□□ -0.42
KIF3A-204ENST00000428744 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
KIF3A-204ENST00000428744 EHMT2Q96KQ7 1210 aa12.26□□□□□ -0.45
KIF3A-204ENST00000428744 OSCARQ8IYS5 282 aa12.24□□□□□ -0.45
KIF3A-204ENST00000428744 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
KIF3A-204ENST00000428744 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
KIF3A-204ENST00000428744 MKRN4PQ13434 485 aaPredicted RBP12.17□□□□□ -0.46
KIF3A-204ENST00000428744 FBLN2P98095 1184 aa12.15□□□□□ -0.46
KIF3A-204ENST00000428744 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
KIF3A-204ENST00000428744 SP7Q8TDD2 431 aaPredicted RBP12.07□□□□□ -0.48
KIF3A-204ENST00000428744 SPDYE2BA6NHP3 402 aa12.06□□□□□ -0.48
KIF3A-204ENST00000428744 SPDYE6P0CI01 402 aa12.06□□□□□ -0.48
KIF3A-204ENST00000428744 SPDYE2Q495Y8 402 aa12.06□□□□□ -0.48
KIF3A-204ENST00000428744 PITPNM1O00562 1244 aa11.94□□□□□ -0.5
KIF3A-204ENST00000428744 SSUH2Q9Y2M2 353 aa11.94□□□□□ -0.5
KIF3A-204ENST00000428744 ZNF692Q9BU19 519 aaPredicted RBP11.93□□□□□ -0.5
KIF3A-204ENST00000428744 PIP4P2Q8N4L2 257 aa11.87□□□□□ -0.51
KIF3A-204ENST00000428744 FXR2P51116 673 aaKnown RBP eCLIP11.85□□□□□ -0.51
KIF3A-204ENST00000428744 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
KIF3A-204ENST00000428744 PABPN1Q86U42 306 aaKnown RBP eCLIP11.76□□□□□ -0.53
KIF3A-204ENST00000428744 CLEC11AQ9Y240 323 aa11.74□□□□□ -0.53
KIF3A-204ENST00000428744 HAX1O00165 279 aa11.73□□□□□ -0.53
KIF3A-204ENST00000428744 SPDYE4A6NLX3 237 aa11.63□□□□□ -0.55
KIF3A-204ENST00000428744 PRKAR2AP13861 404 aaKnown RBP11.63□□□□□ -0.55
KIF3A-204ENST00000428744 PRR29P0C7W0 189 aa11.6□□□□□ -0.55
KIF3A-204ENST00000428744 CHADLQ6NUI6 762 aa11.54□□□□□ -0.56
KIF3A-204ENST00000428744 EVX2Q03828 476 aa11.53□□□□□ -0.56
KIF3A-204ENST00000428744 STAG3Q9UJ98 1225 aa11.46□□□□□ -0.57
KIF3A-204ENST00000428744 C19orf67A6NJJ6 358 aa11.45□□□□□ -0.58
KIF3A-204ENST00000428744 PROM2Q8N271 834 aa11.44□□□□□ -0.58
KIF3A-204ENST00000428744 CREBZFQ9NS37 354 aa11.39□□□□□ -0.59
KIF3A-204ENST00000428744 FARP1Q9Y4F1 1045 aaPredicted RBP11.39□□□□□ -0.59
KIF3A-204ENST00000428744 LHX8Q68G74 356 aa11.29□□□□□ -0.6
KIF3A-204ENST00000428744 CD44P16070 742 aaKnown RBP11.25□□□□□ -0.61
KIF3A-204ENST00000428744 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
KIF3A-204ENST00000428744 GABBR2O75899 941 aa11.24□□□□□ -0.61
KIF3A-204ENST00000428744 FKBP8Q14318 412 aa11.2□□□□□ -0.62
KIF3A-204ENST00000428744 CLCN6P51797 869 aa11.13□□□□□ -0.63
KIF3A-204ENST00000428744 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
KIF3A-204ENST00000428744 ZRANB1Q9UGI0 708 aa11.12□□□□□ -0.63
KIF3A-204ENST00000428744 ZNF579Q8NAF0 562 aaKnown RBP11.11□□□□□ -0.63
KIF3A-204ENST00000428744 MIER1Q8N108 512 aa11.07□□□□□ -0.64
KIF3A-204ENST00000428744 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
KIF3A-204ENST00000428744 PAK3O75914 559 aaPredicted RBP11.01□□□□□ -0.65
KIF3A-204ENST00000428744 PHF12Q96QT6 1004 aa10.99□□□□□ -0.65
KIF3A-204ENST00000428744 PLSCR2Q9NRY7 297 aa10.99□□□□□ -0.65
KIF3A-204ENST00000428744 PLEKHG5O94827 1062 aa10.98□□□□□ -0.65
KIF3A-204ENST00000428744 GALR2O43603 387 aaPredicted RBP10.97□□□□□ -0.65
KIF3A-204ENST00000428744 PLCD3Q8N3E9 789 aa10.96□□□□□ -0.65
KIF3A-204ENST00000428744 TSPYL2Q9H2G4 693 aaPredicted RBP10.94□□□□□ -0.66
KIF3A-204ENST00000428744 CCDC61Q9Y6R9 512 aa10.93□□□□□ -0.66
KIF3A-204ENST00000428744 RASEFQ8IZ41 740 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms