RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 C1orf195Q5TG92 126 aa4.83□□□□□ -1.64
HDAC1-202ENST00000428704 SPAG11AQ6PDA7 123 aa4.83□□□□□ -1.64
HDAC1-202ENST00000428704 SPANXA2-OT1Q8N9U9 137 aa4.83□□□□□ -1.64
HDAC1-202ENST00000428704 LINC00208Q96KT6 92 aa4.83□□□□□ -1.64
HDAC1-202ENST00000428704 CYP4F30PQ9H0H9 118 aa4.83□□□□□ -1.64
HDAC1-202ENST00000428704 NOTCH2NLQ7Z3S9 236 aa4.81□□□□□ -1.64
HDAC1-202ENST00000428704 LINC00313P59037 77 aa4.8□□□□□ -1.64
HDAC1-202ENST00000428704 C1orf64Q8NEQ6 169 aa4.8□□□□□ -1.64
HDAC1-202ENST00000428704 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
HDAC1-202ENST00000428704 FCGBPQ9Y6R7 5405 aaPredicted RBP4.8□□□□□ -1.64
HDAC1-202ENST00000428704 SMIM26A0A096LP01 95 aa4.79□□□□□ -1.64
HDAC1-202ENST00000428704 Q8N9P0 234 aaPredicted RBP4.79□□□□□ -1.64
HDAC1-202ENST00000428704 MT1HP80294 61 aa4.78□□□□□ -1.64
HDAC1-202ENST00000428704 KRTAP13-3Q3SY46 172 aa4.77□□□□□ -1.65
HDAC1-202ENST00000428704 FP248Q71RG6 208 aaPredicted RBP4.77□□□□□ -1.65
HDAC1-202ENST00000428704 NDUFS5O43920 106 aa4.76□□□□□ -1.65
HDAC1-202ENST00000428704 KRTAP10-6P60371 365 aaPredicted RBP4.76□□□□□ -1.65
HDAC1-202ENST00000428704 LOC101927531A0A1B0GV80 90 aa4.75□□□□□ -1.65
HDAC1-202ENST00000428704 KRTAP16-1A8MUX0 517 aa4.75□□□□□ -1.65
HDAC1-202ENST00000428704 SEC61BP60468 96 aaKnown RBP4.75□□□□□ -1.65
HDAC1-202ENST00000428704 Q5W150 140 aa4.73□□□□□ -1.65
HDAC1-202ENST00000428704 NEBP20929 6669 aa4.72□□□□□ -1.65
HDAC1-202ENST00000428704 M0R2T5 61 aa4.71□□□□□ -1.66
HDAC1-202ENST00000428704 MPLKIPQ8TAP9 179 aa4.71□□□□□ -1.66
HDAC1-202ENST00000428704 IGKV2-30P06310 120 aa4.68□□□□□ -1.66
HDAC1-202ENST00000428704 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
HDAC1-202ENST00000428704 Q1T7F1 81 aa4.66□□□□□ -1.66
HDAC1-202ENST00000428704 PCOTHQ58A44 107 aa4.66□□□□□ -1.66
HDAC1-202ENST00000428704 C4orf26Q17RF5 130 aa4.65□□□□□ -1.67
HDAC1-202ENST00000428704 V9GYY9 64 aa4.64□□□□□ -1.67
HDAC1-202ENST00000428704 C20orf166-AS1Q96NR2 134 aa4.63□□□□□ -1.67
HDAC1-202ENST00000428704 A8MUU9 505 aa4.62□□□□□ -1.67
HDAC1-202ENST00000428704 COA5Q86WW8 74 aa4.62□□□□□ -1.67
HDAC1-202ENST00000428704 C9orf92A6NGG3 77 aa4.61□□□□□ -1.67
HDAC1-202ENST00000428704 HRES1P13985 223 aa4.61□□□□□ -1.67
HDAC1-202ENST00000428704 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
HDAC1-202ENST00000428704 ACYP2P14621 99 aa4.6□□□□□ -1.67
HDAC1-202ENST00000428704 DMAC1Q96GE9 116 aa4.6□□□□□ -1.67
HDAC1-202ENST00000428704 FLGP20930 4061 aaPredicted RBP4.59□□□□□ -1.67
HDAC1-202ENST00000428704 COX6B2Q6YFQ2 88 aa4.56□□□□□ -1.68
HDAC1-202ENST00000428704 C7orf65Q6ZTY9 151 aa4.56□□□□□ -1.68
HDAC1-202ENST00000428704 Q75L30 129 aa4.56□□□□□ -1.68
HDAC1-202ENST00000428704 IGKV2D-30A0A075B6S6 120 aa4.54□□□□□ -1.68
HDAC1-202ENST00000428704 LINC01558Q9Y6Z2 57 aa4.54□□□□□ -1.68
HDAC1-202ENST00000428704 A8MUN3 132 aa4.53□□□□□ -1.68
HDAC1-202ENST00000428704 RPL37P61927 97 aaKnown RBP4.53□□□□□ -1.68
HDAC1-202ENST00000428704 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
HDAC1-202ENST00000428704 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
HDAC1-202ENST00000428704 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
HDAC1-202ENST00000428704 Q5VV11 94 aa4.49□□□□□ -1.69
HDAC1-202ENST00000428704 MUC12Q9UKN1 5478 aa4.47□□□□□ -1.69
HDAC1-202ENST00000428704 CHKB-CPT1BH3BT56 60 aa4.47□□□□□ -1.69
HDAC1-202ENST00000428704 PSPHP1O15172 72 aa4.47□□□□□ -1.69
HDAC1-202ENST00000428704 SPINK7P58062 85 aa4.47□□□□□ -1.69
HDAC1-202ENST00000428704 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
HDAC1-202ENST00000428704 ATP11AUNQ6ZP68 121 aa4.45□□□□□ -1.7
HDAC1-202ENST00000428704 PRR15LQ9BU68 103 aa4.45□□□□□ -1.7
HDAC1-202ENST00000428704 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
HDAC1-202ENST00000428704 BRK1Q8WUW1 75 aa4.42□□□□□ -1.7
HDAC1-202ENST00000428704 KRTAP9-8Q9BYQ0 159 aa4.42□□□□□ -1.7
HDAC1-202ENST00000428704 SPTSSBQ8NFR3 76 aa4.4□□□□□ -1.71
HDAC1-202ENST00000428704 A0A1B0GU69 56 aa4.37□□□□□ -1.71
HDAC1-202ENST00000428704 CDC42SE1Q9NRR8 79 aa4.36□□□□□ -1.71
HDAC1-202ENST00000428704 A6NED7 52 aa4.35□□□□□ -1.71
HDAC1-202ENST00000428704 LCA10Q71F78 164 aa4.35□□□□□ -1.71
HDAC1-202ENST00000428704 KRTAP19-6Q3LI70 58 aa4.34□□□□□ -1.71
HDAC1-202ENST00000428704 MT2AP02795 61 aa4.31□□□□□ -1.72
HDAC1-202ENST00000428704 SEC61GP60059 68 aa4.3□□□□□ -1.72
HDAC1-202ENST00000428704 SPATA8Q6RVD6 105 aa4.3□□□□□ -1.72
HDAC1-202ENST00000428704 MDN1Q9NU22 5596 aa4.3□□□□□ -1.72
HDAC1-202ENST00000428704 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
HDAC1-202ENST00000428704 UQCR11O14957 56 aa4.29□□□□□ -1.72
HDAC1-202ENST00000428704 MT1FP04733 61 aa4.28□□□□□ -1.72
HDAC1-202ENST00000428704 KMT2DO14686 5537 aa4.28□□□□□ -1.72
HDAC1-202ENST00000428704 A8MU10 97 aa4.27□□□□□ -1.73
HDAC1-202ENST00000428704 KRTAP10-10P60014 251 aa4.27□□□□□ -1.73
HDAC1-202ENST00000428704 MIR22HGQ0VDD5 57 aa4.24□□□□□ -1.73
HDAC1-202ENST00000428704 H1FX-AS1Q4G0G2 97 aa4.24□□□□□ -1.73
HDAC1-202ENST00000428704 PMAIP1Q13794 54 aa4.22□□□□□ -1.73
HDAC1-202ENST00000428704 RBM12B-AS1Q9P1G2 102 aa4.22□□□□□ -1.73
HDAC1-202ENST00000428704 S4R3F8 94 aa4.21□□□□□ -1.74
HDAC1-202ENST00000428704 A0A1B0GU33 70 aa4.2□□□□□ -1.74
HDAC1-202ENST00000428704 A6NN06 94 aa4.19□□□□□ -1.74
HDAC1-202ENST00000428704 KRTAP2-3P0C7H8 128 aa4.17□□□□□ -1.74
HDAC1-202ENST00000428704 KRTAP2-4Q9BYR9 128 aa4.17□□□□□ -1.74
HDAC1-202ENST00000428704 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
HDAC1-202ENST00000428704 H0YAA0 97 aa4.14□□□□□ -1.75
HDAC1-202ENST00000428704 CSAG1Q6PB30 78 aa4.13□□□□□ -1.75
HDAC1-202ENST00000428704 MT3P25713 68 aa4.12□□□□□ -1.75
HDAC1-202ENST00000428704 KTN1-AS1Q86SY8 53 aa4.1□□□□□ -1.75
HDAC1-202ENST00000428704 P0C880 135 aa4.05□□□□□ -1.76
HDAC1-202ENST00000428704 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
HDAC1-202ENST00000428704 ADM2Q7Z4H4 148 aa4.04□□□□□ -1.76
HDAC1-202ENST00000428704 M0QZ58 72 aa4.03□□□□□ -1.76
HDAC1-202ENST00000428704 K7ERS5 55 aa4.02□□□□□ -1.77
HDAC1-202ENST00000428704 KRTAP13-4Q3LI77 160 aa4.02□□□□□ -1.77
HDAC1-202ENST00000428704 KRTAP2-1Q9BYU5 128 aa4□□□□□ -1.77
HDAC1-202ENST00000428704 SPRR2EP22531 72 aa3.92□□□□□ -1.78
HDAC1-202ENST00000428704 SPRR2BP35325 72 aa3.92□□□□□ -1.78
HDAC1-202ENST00000428704 SPRR2AP35326 72 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms