RNA–Protein interactions for RNA: ENST00000428621.5

CLHC1-207, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 2

Gene CLHC1, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-207ENST00000428621 SPTSSBQ8NFR3 76 aa4.44□□□□□ -1.7
CLHC1-207ENST00000428621 A0A1B0GU69 56 aa4.42□□□□□ -1.7
CLHC1-207ENST00000428621 A6NN06 94 aa4.42□□□□□ -1.7
CLHC1-207ENST00000428621 C20orf166-AS1Q96NR2 134 aa4.42□□□□□ -1.7
CLHC1-207ENST00000428621 A8MUU9 505 aa4.42□□□□□ -1.7
CLHC1-207ENST00000428621 BIRC6Q9NR09 4857 aa4.41□□□□□ -1.7
CLHC1-207ENST00000428621 RYR3Q15413 4870 aa4.41□□□□□ -1.7
CLHC1-207ENST00000428621 SMR3BP02814 79 aaPredicted RBP4.41□□□□□ -1.7
CLHC1-207ENST00000428621 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
CLHC1-207ENST00000428621 KMT2CQ8NEZ4 4911 aaKnown RBP4.37□□□□□ -1.71
CLHC1-207ENST00000428621 SPATA8Q6RVD6 105 aa4.36□□□□□ -1.71
CLHC1-207ENST00000428621 KRTAP4-5Q9BYR2 181 aa4.36□□□□□ -1.71
CLHC1-207ENST00000428621 UQCR11O14957 56 aa4.36□□□□□ -1.71
CLHC1-207ENST00000428621 C9orf92A6NGG3 77 aa4.35□□□□□ -1.71
CLHC1-207ENST00000428621 Q8N1X5 172 aa4.35□□□□□ -1.71
CLHC1-207ENST00000428621 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
CLHC1-207ENST00000428621 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
CLHC1-207ENST00000428621 KRTAP3-1Q9BYR8 98 aa4.32□□□□□ -1.72
CLHC1-207ENST00000428621 FLG2Q5D862 2391 aaPredicted RBP4.31□□□□□ -1.72
CLHC1-207ENST00000428621 SEC61GP60059 68 aa4.3□□□□□ -1.72
CLHC1-207ENST00000428621 TNXBP22105 4242 aa4.3□□□□□ -1.72
CLHC1-207ENST00000428621 FAT3Q8TDW7 4589 aa4.3□□□□□ -1.72
CLHC1-207ENST00000428621 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
CLHC1-207ENST00000428621 HSPG2P98160 4391 aa4.28□□□□□ -1.72
CLHC1-207ENST00000428621 KRTAP4-11Q9BYQ6 195 aa4.27□□□□□ -1.73
CLHC1-207ENST00000428621 EPPK1P58107 5090 aaKnown RBP4.27□□□□□ -1.73
CLHC1-207ENST00000428621 KRTAP10-8P60410 259 aa4.26□□□□□ -1.73
CLHC1-207ENST00000428621 COX6B2Q6YFQ2 88 aa4.26□□□□□ -1.73
CLHC1-207ENST00000428621 RYR1P21817 5038 aa4.25□□□□□ -1.73
CLHC1-207ENST00000428621 KRTAP9-7A8MTY7 169 aa4.25□□□□□ -1.73
CLHC1-207ENST00000428621 LRP1Q07954 4544 aaKnown RBP4.24□□□□□ -1.73
CLHC1-207ENST00000428621 Q5VSD8 79 aa4.24□□□□□ -1.73
CLHC1-207ENST00000428621 RBM12B-AS1Q9P1G2 102 aa4.24□□□□□ -1.73
CLHC1-207ENST00000428621 RPL37P61927 97 aaKnown RBP4.22□□□□□ -1.73
CLHC1-207ENST00000428621 H0YAA0 97 aa4.2□□□□□ -1.74
CLHC1-207ENST00000428621 A0A1B0GU33 70 aa4.19□□□□□ -1.74
CLHC1-207ENST00000428621 H1FX-AS1Q4G0G2 97 aa4.18□□□□□ -1.74
CLHC1-207ENST00000428621 PCLOQ9Y6V0 5065 aa4.17□□□□□ -1.74
CLHC1-207ENST00000428621 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
CLHC1-207ENST00000428621 MYCBP2O75592 4640 aa4.15□□□□□ -1.75
CLHC1-207ENST00000428621 KIAA1109Q2LD37 5005 aa4.15□□□□□ -1.75
CLHC1-207ENST00000428621 HERC2O95714 4834 aa4.14□□□□□ -1.75
CLHC1-207ENST00000428621 ADM2Q7Z4H4 148 aa4.14□□□□□ -1.75
CLHC1-207ENST00000428621 MT1HL1P0DM35 61 aa4.14□□□□□ -1.75
CLHC1-207ENST00000428621 DMBT1Q9UGM3 2413 aaPredicted RBP4.12□□□□□ -1.75
CLHC1-207ENST00000428621 S4R3F8 94 aa4.1□□□□□ -1.75
CLHC1-207ENST00000428621 TPRXLQ17RH7 258 aa4.09□□□□□ -1.76
CLHC1-207ENST00000428621 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
CLHC1-207ENST00000428621 K7ERS5 55 aa4.07□□□□□ -1.76
CLHC1-207ENST00000428621 LINC01554Q52M75 96 aa4.06□□□□□ -1.76
CLHC1-207ENST00000428621 CSAG1Q6PB30 78 aa4.05□□□□□ -1.76
CLHC1-207ENST00000428621 KRTAP9-3Q9BYQ3 159 aa4.04□□□□□ -1.76
CLHC1-207ENST00000428621 KRTAP13-4Q3LI77 160 aa4.01□□□□□ -1.77
CLHC1-207ENST00000428621 LRP2P98164 4655 aa4□□□□□ -1.77
CLHC1-207ENST00000428621 KRTAP25-1Q3LHN0 102 aa3.99□□□□□ -1.77
CLHC1-207ENST00000428621 LPAP08519 4548 aa3.98□□□□□ -1.77
CLHC1-207ENST00000428621 P0C880 135 aa3.98□□□□□ -1.77
CLHC1-207ENST00000428621 ABCA13Q86UQ4 5058 aa3.97□□□□□ -1.77
CLHC1-207ENST00000428621 ROMO1P60602 79 aa3.96□□□□□ -1.77
CLHC1-207ENST00000428621 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
CLHC1-207ENST00000428621 A0A0D9SG42 100 aa3.94□□□□□ -1.78
CLHC1-207ENST00000428621 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
CLHC1-207ENST00000428621 M0QZ58 72 aa3.92□□□□□ -1.78
CLHC1-207ENST00000428621 UBR4Q5T4S7 5183 aa3.91□□□□□ -1.78
CLHC1-207ENST00000428621 SEC61BP60468 96 aaKnown RBP3.91□□□□□ -1.78
CLHC1-207ENST00000428621 KRTAP12-2P59991 146 aa3.88□□□□□ -1.79
CLHC1-207ENST00000428621 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
CLHC1-207ENST00000428621 MUC17Q685J3 4493 aa3.87□□□□□ -1.79
CLHC1-207ENST00000428621 CRIPTQ9P021 101 aa3.83□□□□□ -1.8
CLHC1-207ENST00000428621 SPINT4Q6UDR6 99 aa3.82□□□□□ -1.8
CLHC1-207ENST00000428621 KRTAP4-1Q9BYQ7 146 aa3.79□□□□□ -1.8
CLHC1-207ENST00000428621 R4GN34 69 aa3.79□□□□□ -1.8
CLHC1-207ENST00000428621 KRTAP19-2Q3LHN2 52 aa3.78□□□□□ -1.8
CLHC1-207ENST00000428621 HERC1Q15751 4861 aa3.77□□□□□ -1.81
CLHC1-207ENST00000428621 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
CLHC1-207ENST00000428621 C10orf95Q9H7T3 257 aa3.75□□□□□ -1.81
CLHC1-207ENST00000428621 FLGP20930 4061 aaPredicted RBP3.71□□□□□ -1.82
CLHC1-207ENST00000428621 HMCN2Q8NDA2 5059 aa3.7□□□□□ -1.82
CLHC1-207ENST00000428621 MUC2Q02817 5179 aa3.66□□□□□ -1.82
CLHC1-207ENST00000428621 CAMK2N1Q7Z7J9 78 aa3.58□□□□□ -1.84
CLHC1-207ENST00000428621 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
CLHC1-207ENST00000428621 FAT4Q6V0I7 4981 aa3.52□□□□□ -1.85
CLHC1-207ENST00000428621 RNF213Q63HN8 5207 aa3.5□□□□□ -1.85
CLHC1-207ENST00000428621 SPRR2GQ9BYE4 73 aa3.5□□□□□ -1.85
CLHC1-207ENST00000428621 PLAC4Q8WY50 150 aa3.48□□□□□ -1.85
CLHC1-207ENST00000428621 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
CLHC1-207ENST00000428621 TNP1P09430 55 aa3.47□□□□□ -1.85
CLHC1-207ENST00000428621 MT1HP80294 61 aa3.46□□□□□ -1.86
CLHC1-207ENST00000428621 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
CLHC1-207ENST00000428621 M0R2T5 61 aa3.42□□□□□ -1.86
CLHC1-207ENST00000428621 MT2AP02795 61 aa3.4□□□□□ -1.87
CLHC1-207ENST00000428621 MT1FP04733 61 aa3.39□□□□□ -1.87
CLHC1-207ENST00000428621 KRTAP10-10P60014 251 aa3.35□□□□□ -1.87
CLHC1-207ENST00000428621 KRTAP19-8Q3LI54 63 aa3.35□□□□□ -1.87
CLHC1-207ENST00000428621 CRCT1Q9UGL9 99 aa3.35□□□□□ -1.87
CLHC1-207ENST00000428621 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
CLHC1-207ENST00000428621 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
CLHC1-207ENST00000428621 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
CLHC1-207ENST00000428621 MT1BP07438 61 aa3.28□□□□□ -1.88
CLHC1-207ENST00000428621 LCE3AQ5TA76 89 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms