RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 J3QL48 77 aa8.89□□□□□ -0.99
PRDM5-203ENST00000428209 SEC61GP60059 68 aa8.89□□□□□ -0.99
PRDM5-203ENST00000428209 LRP2P98164 4655 aa8.85□□□□□ -0.99
PRDM5-203ENST00000428209 UQCR11O14957 56 aa8.83□□□□□ -1
PRDM5-203ENST00000428209 LPAP08519 4548 aa8.82□□□□□ -1
PRDM5-203ENST00000428209 PCLOQ9Y6V0 5065 aa8.81□□□□□ -1
PRDM5-203ENST00000428209 PMAIP1Q13794 54 aa8.79□□□□□ -1
PRDM5-203ENST00000428209 MIR22HGQ0VDD5 57 aa8.77□□□□□ -1.01
PRDM5-203ENST00000428209 SPATA8Q6RVD6 105 aa8.77□□□□□ -1.01
PRDM5-203ENST00000428209 KRTAP3-3Q9BYR6 98 aa8.73□□□□□ -1.01
PRDM5-203ENST00000428209 S4R3F8 94 aa8.73□□□□□ -1.01
PRDM5-203ENST00000428209 H1FX-AS1Q4G0G2 97 aa8.7□□□□□ -1.02
PRDM5-203ENST00000428209 RBM12B-AS1Q9P1G2 102 aa8.68□□□□□ -1.02
PRDM5-203ENST00000428209 A0A1B0GU33 70 aa8.66□□□□□ -1.02
PRDM5-203ENST00000428209 SEC61BP60468 96 aaKnown RBP8.66□□□□□ -1.02
PRDM5-203ENST00000428209 A6NN06 94 aa8.64□□□□□ -1.03
PRDM5-203ENST00000428209 H0YAA0 97 aa8.59□□□□□ -1.03
PRDM5-203ENST00000428209 KRTAP10-6P60371 365 aaPredicted RBP8.53□□□□□ -1.04
PRDM5-203ENST00000428209 HERC1Q15751 4861 aa8.53□□□□□ -1.04
PRDM5-203ENST00000428209 KRTAP3-2Q9BYR7 98 aa8.51□□□□□ -1.05
PRDM5-203ENST00000428209 CSAG1Q6PB30 78 aa8.49□□□□□ -1.05
PRDM5-203ENST00000428209 KTN1-AS1Q86SY8 53 aa8.49□□□□□ -1.05
PRDM5-203ENST00000428209 KRTAP4-1Q9BYQ7 146 aa8.49□□□□□ -1.05
PRDM5-203ENST00000428209 MUC17Q685J3 4493 aa8.47□□□□□ -1.05
PRDM5-203ENST00000428209 P0C880 135 aa8.43□□□□□ -1.06
PRDM5-203ENST00000428209 ADM2Q7Z4H4 148 aa8.42□□□□□ -1.06
PRDM5-203ENST00000428209 HMCN2Q8NDA2 5059 aa8.42□□□□□ -1.06
PRDM5-203ENST00000428209 KRTAP13-4Q3LI77 160 aa8.37□□□□□ -1.07
PRDM5-203ENST00000428209 A0A0D9SG42 100 aa8.3□□□□□ -1.08
PRDM5-203ENST00000428209 K7ERS5 55 aa8.29□□□□□ -1.08
PRDM5-203ENST00000428209 KRTAP19-2Q3LHN2 52 aa8.28□□□□□ -1.08
PRDM5-203ENST00000428209 MUC2Q02817 5179 aa8.26□□□□□ -1.09
PRDM5-203ENST00000428209 PRAC1Q96KF2 57 aa8.21□□□□□ -1.1
PRDM5-203ENST00000428209 M0QZ58 72 aa8.19□□□□□ -1.1
PRDM5-203ENST00000428209 R4GN34 69 aa8.09□□□□□ -1.11
PRDM5-203ENST00000428209 FLGP20930 4061 aaPredicted RBP8.08□□□□□ -1.12
PRDM5-203ENST00000428209 KRTAP12-2P59991 146 aa8.08□□□□□ -1.12
PRDM5-203ENST00000428209 SPINT4Q6UDR6 99 aa8.06□□□□□ -1.12
PRDM5-203ENST00000428209 KRTAP12-1P59990 96 aa8.05□□□□□ -1.12
PRDM5-203ENST00000428209 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
PRDM5-203ENST00000428209 UBR4Q5T4S7 5183 aa8.02□□□□□ -1.13
PRDM5-203ENST00000428209 LINC01554Q52M75 96 aa8.02□□□□□ -1.13
PRDM5-203ENST00000428209 ROMO1P60602 79 aa8.01□□□□□ -1.13
PRDM5-203ENST00000428209 RNF213Q63HN8 5207 aa7.97□□□□□ -1.13
PRDM5-203ENST00000428209 LCE2CQ5TA81 110 aa7.95□□□□□ -1.14
PRDM5-203ENST00000428209 CRIPTQ9P021 101 aa7.89□□□□□ -1.15
PRDM5-203ENST00000428209 KRTAP25-1Q3LHN0 102 aa7.88□□□□□ -1.15
PRDM5-203ENST00000428209 FAT4Q6V0I7 4981 aa7.86□□□□□ -1.15
PRDM5-203ENST00000428209 M0R2T5 61 aa7.8□□□□□ -1.16
PRDM5-203ENST00000428209 MT1HP80294 61 aa7.78□□□□□ -1.16
PRDM5-203ENST00000428209 C10orf95Q9H7T3 257 aa7.68□□□□□ -1.18
PRDM5-203ENST00000428209 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
PRDM5-203ENST00000428209 SPRR2GQ9BYE4 73 aa7.57□□□□□ -1.2
PRDM5-203ENST00000428209 MT2AP02795 61 aa7.56□□□□□ -1.2
PRDM5-203ENST00000428209 KRTAP10-10P60014 251 aa7.55□□□□□ -1.2
PRDM5-203ENST00000428209 KRTAP9-8Q9BYQ0 159 aa7.54□□□□□ -1.2
PRDM5-203ENST00000428209 MT1FP04733 61 aa7.53□□□□□ -1.2
PRDM5-203ENST00000428209 KRTAP19-1Q8IUB9 90 aa7.53□□□□□ -1.2
PRDM5-203ENST00000428209 LCE2AQ5TA79 106 aaPredicted RBP7.5□□□□□ -1.21
PRDM5-203ENST00000428209 PLAC4Q8WY50 150 aa7.44□□□□□ -1.22
PRDM5-203ENST00000428209 TNP1P09430 55 aa7.29□□□□□ -1.24
PRDM5-203ENST00000428209 KRTAP19-8Q3LI54 63 aa7.29□□□□□ -1.24
PRDM5-203ENST00000428209 PP632Q6XCG6 107 aa7.25□□□□□ -1.25
PRDM5-203ENST00000428209 KRTAP9-3Q9BYQ3 159 aa7.25□□□□□ -1.25
PRDM5-203ENST00000428209 MT1BP07438 61 aa7.2□□□□□ -1.26
PRDM5-203ENST00000428209 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
PRDM5-203ENST00000428209 KRTAP15-1Q3LI76 137 aa7.07□□□□□ -1.28
PRDM5-203ENST00000428209 KRTAP10-5P60370 271 aa7.06□□□□□ -1.28
PRDM5-203ENST00000428209 MT1XP80297 61 aa7.06□□□□□ -1.28
PRDM5-203ENST00000428209 LCE2BO14633 110 aa7.01□□□□□ -1.29
PRDM5-203ENST00000428209 A0A0A0MQY5 61 aa6.96□□□□□ -1.29
PRDM5-203ENST00000428209 LCE2DQ5TA82 110 aaPredicted RBP6.94□□□□□ -1.3
PRDM5-203ENST00000428209 H3BS24 57 aa6.94□□□□□ -1.3
PRDM5-203ENST00000428209 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
PRDM5-203ENST00000428209 PRO2289Q9P1D8 64 aa6.92□□□□□ -1.3
PRDM5-203ENST00000428209 KRTAP10-7P60409 375 aaPredicted RBP6.83□□□□□ -1.32
PRDM5-203ENST00000428209 KRTAP10-12P60413 245 aa6.82□□□□□ -1.32
PRDM5-203ENST00000428209 USH2AO75445 5202 aa6.82□□□□□ -1.32
PRDM5-203ENST00000428209 KRTAP8-1Q8IUC2 63 aa6.77□□□□□ -1.33
PRDM5-203ENST00000428209 KRTAP9-2Q9BYQ4 174 aa6.75□□□□□ -1.33
PRDM5-203ENST00000428209 NDUFAF8A1L188 74 aa6.73□□□□□ -1.33
PRDM5-203ENST00000428209 KRTAP12-3P60328 96 aa6.64□□□□□ -1.35
PRDM5-203ENST00000428209 LUZP6Q538Z0 58 aa6.59□□□□□ -1.36
PRDM5-203ENST00000428209 SPRR5A0A1B0GTR4 108 aa6.56□□□□□ -1.36
PRDM5-203ENST00000428209 KRTAP19-6Q3LI70 58 aa6.54□□□□□ -1.36
PRDM5-203ENST00000428209 SSPOA2VEC9 5147 aa6.54□□□□□ -1.36
PRDM5-203ENST00000428209 KMT2DO14686 5537 aa6.5□□□□□ -1.37
PRDM5-203ENST00000428209 KRTAP4-8A0A0G2JLE6 195 aa6.49□□□□□ -1.37
PRDM5-203ENST00000428209 KRTAP4-8Q9BYQ9 185 aa6.49□□□□□ -1.37
PRDM5-203ENST00000428209 CRCT1Q9UGL9 99 aa6.49□□□□□ -1.37
PRDM5-203ENST00000428209 FSIP2Q5CZC0 6907 aa6.49□□□□□ -1.37
PRDM5-203ENST00000428209 KRTAP19-5Q3LI72 72 aa6.48□□□□□ -1.37
PRDM5-203ENST00000428209 KRTAP9-6A0A140TA67 174 aa6.33□□□□□ -1.4
PRDM5-203ENST00000428209 FCGBPQ9Y6R7 5405 aaPredicted RBP6.33□□□□□ -1.4
PRDM5-203ENST00000428209 KRTAP19-7Q3SYF9 63 aa6.29□□□□□ -1.4
PRDM5-203ENST00000428209 LCE3CQ5T5A8 94 aa6.22□□□□□ -1.41
PRDM5-203ENST00000428209 MT1EP04732 61 aa6.15□□□□□ -1.43
PRDM5-203ENST00000428209 MT1LQ93083 61 aa6.08□□□□□ -1.44
PRDM5-203ENST00000428209 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
PRDM5-203ENST00000428209 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms