RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 H1FX-AS1Q4G0G2 97 aa4.14□□□□□ -1.75
LRCH3-204ENST00000428136 KRTAP10-8P60410 259 aa4.12□□□□□ -1.75
LRCH3-204ENST00000428136 FLG2Q5D862 2391 aaPredicted RBP4.11□□□□□ -1.75
LRCH3-204ENST00000428136 LRP1Q07954 4544 aaKnown RBP4.09□□□□□ -1.75
LRCH3-204ENST00000428136 CSAG1Q6PB30 78 aa4.08□□□□□ -1.76
LRCH3-204ENST00000428136 RPL37P61927 97 aaKnown RBP4.07□□□□□ -1.76
LRCH3-204ENST00000428136 KMT2CQ8NEZ4 4911 aaKnown RBP4.05□□□□□ -1.76
LRCH3-204ENST00000428136 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
LRCH3-204ENST00000428136 XP32Q5T750 250 aa4.03□□□□□ -1.76
LRCH3-204ENST00000428136 KRTAP25-1Q3LHN0 102 aa4.01□□□□□ -1.77
LRCH3-204ENST00000428136 RYR1P21817 5038 aa4.01□□□□□ -1.77
LRCH3-204ENST00000428136 Q5VSD8 79 aa4□□□□□ -1.77
LRCH3-204ENST00000428136 K7ERS5 55 aa3.99□□□□□ -1.77
LRCH3-204ENST00000428136 S4R3F8 94 aa3.98□□□□□ -1.77
LRCH3-204ENST00000428136 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
LRCH3-204ENST00000428136 MT1HL1P0DM35 61 aa3.96□□□□□ -1.78
LRCH3-204ENST00000428136 KRTAP17-1Q9BYP8 105 aa3.96□□□□□ -1.78
LRCH3-204ENST00000428136 ROMO1P60602 79 aa3.95□□□□□ -1.78
LRCH3-204ENST00000428136 MYCBP2O75592 4640 aa3.94□□□□□ -1.78
LRCH3-204ENST00000428136 RYR3Q15413 4870 aa3.93□□□□□ -1.78
LRCH3-204ENST00000428136 P0C880 135 aa3.91□□□□□ -1.78
LRCH3-204ENST00000428136 SEC61BP60468 96 aaKnown RBP3.89□□□□□ -1.79
LRCH3-204ENST00000428136 TPRXLQ17RH7 258 aa3.89□□□□□ -1.79
LRCH3-204ENST00000428136 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
LRCH3-204ENST00000428136 LPAP08519 4548 aa3.87□□□□□ -1.79
LRCH3-204ENST00000428136 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
LRCH3-204ENST00000428136 DMBT1Q9UGM3 2413 aaPredicted RBP3.87□□□□□ -1.79
LRCH3-204ENST00000428136 A0A0D9SG42 100 aa3.86□□□□□ -1.79
LRCH3-204ENST00000428136 KIAA1109Q2LD37 5005 aa3.84□□□□□ -1.79
LRCH3-204ENST00000428136 KRTAP12-2P59991 146 aa3.84□□□□□ -1.79
LRCH3-204ENST00000428136 LRP2P98164 4655 aa3.84□□□□□ -1.8
LRCH3-204ENST00000428136 CRIPTQ9P021 101 aa3.83□□□□□ -1.8
LRCH3-204ENST00000428136 M0QZ58 72 aa3.83□□□□□ -1.8
LRCH3-204ENST00000428136 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
LRCH3-204ENST00000428136 SPINT4Q6UDR6 99 aa3.78□□□□□ -1.81
LRCH3-204ENST00000428136 MUC17Q685J3 4493 aa3.77□□□□□ -1.81
LRCH3-204ENST00000428136 EPPK1P58107 5090 aaKnown RBP3.76□□□□□ -1.81
LRCH3-204ENST00000428136 ABCA13Q86UQ4 5058 aa3.75□□□□□ -1.81
LRCH3-204ENST00000428136 C10orf95Q9H7T3 257 aa3.74□□□□□ -1.81
LRCH3-204ENST00000428136 KRTAP4-5Q9BYR2 181 aa3.7□□□□□ -1.82
LRCH3-204ENST00000428136 KRTAP19-2Q3LHN2 52 aa3.68□□□□□ -1.82
LRCH3-204ENST00000428136 KRTAP15-1Q3LI76 137 aa3.68□□□□□ -1.82
LRCH3-204ENST00000428136 KRTAP4-1Q9BYQ7 146 aa3.68□□□□□ -1.82
LRCH3-204ENST00000428136 R4GN34 69 aa3.66□□□□□ -1.82
LRCH3-204ENST00000428136 LORP23490 312 aaPredicted RBP3.64□□□□□ -1.83
LRCH3-204ENST00000428136 FLGP20930 4061 aaPredicted RBP3.59□□□□□ -1.84
LRCH3-204ENST00000428136 LCE2BO14633 110 aa3.57□□□□□ -1.84
LRCH3-204ENST00000428136 HERC2O95714 4834 aa3.57□□□□□ -1.84
LRCH3-204ENST00000428136 BIRC6Q9NR09 4857 aa3.57□□□□□ -1.84
LRCH3-204ENST00000428136 HERC1Q15751 4861 aa3.54□□□□□ -1.84
LRCH3-204ENST00000428136 PP632Q6XCG6 107 aa3.51□□□□□ -1.85
LRCH3-204ENST00000428136 LCE2CQ5TA81 110 aa3.49□□□□□ -1.85
LRCH3-204ENST00000428136 PLAC4Q8WY50 150 aa3.48□□□□□ -1.85
LRCH3-204ENST00000428136 CAMK2N1Q7Z7J9 78 aa3.46□□□□□ -1.86
LRCH3-204ENST00000428136 KRTAP23-1A1A580 65 aa3.45□□□□□ -1.86
LRCH3-204ENST00000428136 LCE2AQ5TA79 106 aaPredicted RBP3.44□□□□□ -1.86
LRCH3-204ENST00000428136 MUC2Q02817 5179 aa3.44□□□□□ -1.86
LRCH3-204ENST00000428136 HMCN2Q8NDA2 5059 aa3.43□□□□□ -1.86
LRCH3-204ENST00000428136 PCLOQ9Y6V0 5065 aa3.4□□□□□ -1.86
LRCH3-204ENST00000428136 SPRR2GQ9BYE4 73 aa3.39□□□□□ -1.87
LRCH3-204ENST00000428136 TNP1P09430 55 aa3.38□□□□□ -1.87
LRCH3-204ENST00000428136 KRTAP19-1Q8IUB9 90 aa3.35□□□□□ -1.87
LRCH3-204ENST00000428136 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
LRCH3-204ENST00000428136 MT1HP80294 61 aa3.3□□□□□ -1.88
LRCH3-204ENST00000428136 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.88
LRCH3-204ENST00000428136 MT2AP02795 61 aa3.26□□□□□ -1.89
LRCH3-204ENST00000428136 KRTAP9-8Q9BYQ0 159 aa3.25□□□□□ -1.89
LRCH3-204ENST00000428136 MT1FP04733 61 aa3.25□□□□□ -1.89
LRCH3-204ENST00000428136 KRTAP19-8Q3LI54 63 aa3.25□□□□□ -1.89
LRCH3-204ENST00000428136 RNF213Q63HN8 5207 aa3.25□□□□□ -1.89
LRCH3-204ENST00000428136 M0R2T5 61 aa3.22□□□□□ -1.89
LRCH3-204ENST00000428136 KRTAP10-10P60014 251 aa3.2□□□□□ -1.9
LRCH3-204ENST00000428136 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
LRCH3-204ENST00000428136 UBR4Q5T4S7 5183 aa3.2□□□□□ -1.9
LRCH3-204ENST00000428136 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
LRCH3-204ENST00000428136 MT1BP07438 61 aa3.17□□□□□ -1.9
LRCH3-204ENST00000428136 KRTAP10-5P60370 271 aa3.16□□□□□ -1.9
LRCH3-204ENST00000428136 MT1XP80297 61 aa3.15□□□□□ -1.91
LRCH3-204ENST00000428136 PRO2289Q9P1D8 64 aa3.13□□□□□ -1.91
LRCH3-204ENST00000428136 KRTAP9-3Q9BYQ3 159 aa3.12□□□□□ -1.91
LRCH3-204ENST00000428136 KRTAP10-12P60413 245 aa3.07□□□□□ -1.92
LRCH3-204ENST00000428136 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
LRCH3-204ENST00000428136 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
LRCH3-204ENST00000428136 KRTAP10-7P60409 375 aaPredicted RBP3.04□□□□□ -1.92
LRCH3-204ENST00000428136 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
LRCH3-204ENST00000428136 INE1O15225 51 aa2.91□□□□□ -1.94
LRCH3-204ENST00000428136 LCE3CQ5T5A8 94 aa2.9□□□□□ -1.95
LRCH3-204ENST00000428136 KRTAP19-4Q3LI73 84 aa2.83□□□□□ -1.96
LRCH3-204ENST00000428136 KRTAP4-8A0A0G2JLE6 195 aa2.81□□□□□ -1.96
LRCH3-204ENST00000428136 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
LRCH3-204ENST00000428136 KRTAP4-8Q9BYQ9 185 aa2.81□□□□□ -1.96
LRCH3-204ENST00000428136 USH2AO75445 5202 aa2.81□□□□□ -1.96
LRCH3-204ENST00000428136 KRTAP9-6A8MVA2 160 aa2.79□□□□□ -1.96
LRCH3-204ENST00000428136 KMT2DO14686 5537 aa2.78□□□□□ -1.96
LRCH3-204ENST00000428136 KRTAP2-3P0C7H8 128 aa2.75□□□□□ -1.97
LRCH3-204ENST00000428136 KRTAP2-4Q9BYR9 128 aa2.75□□□□□ -1.97
LRCH3-204ENST00000428136 KRTAP2-1Q9BYU5 128 aa2.75□□□□□ -1.97
LRCH3-204ENST00000428136 MT1EP04732 61 aa2.73□□□□□ -1.97
LRCH3-204ENST00000428136 MT1LQ93083 61 aa2.73□□□□□ -1.97
LRCH3-204ENST00000428136 SSPOA2VEC9 5147 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms