RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 FAT1Q14517 4588 aa4.61□□□□□ -1.67
SH3D19-204ENST00000427414 TPRXLQ17RH7 258 aa4.61□□□□□ -1.67
SH3D19-204ENST00000427414 BIRC6Q9NR09 4857 aa4.59□□□□□ -1.67
SH3D19-204ENST00000427414 FLG2Q5D862 2391 aaPredicted RBP4.59□□□□□ -1.67
SH3D19-204ENST00000427414 TNXBP22105 4242 aa4.58□□□□□ -1.68
SH3D19-204ENST00000427414 RPL37P61927 97 aaKnown RBP4.58□□□□□ -1.68
SH3D19-204ENST00000427414 XP32Q5T750 250 aa4.57□□□□□ -1.68
SH3D19-204ENST00000427414 FAT3Q8TDW7 4589 aa4.56□□□□□ -1.68
SH3D19-204ENST00000427414 H0YAA0 97 aa4.55□□□□□ -1.68
SH3D19-204ENST00000427414 SEC61BP60468 96 aaKnown RBP4.55□□□□□ -1.68
SH3D19-204ENST00000427414 C9orf92A6NGG3 77 aa4.54□□□□□ -1.68
SH3D19-204ENST00000427414 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
SH3D19-204ENST00000427414 KIAA1109Q2LD37 5005 aa4.53□□□□□ -1.68
SH3D19-204ENST00000427414 KRTAP4-5Q9BYR2 181 aa4.52□□□□□ -1.69
SH3D19-204ENST00000427414 A0A1B0GU33 70 aa4.51□□□□□ -1.69
SH3D19-204ENST00000427414 LCE2CQ5TA81 110 aa4.5□□□□□ -1.69
SH3D19-204ENST00000427414 ROMO1P60602 79 aa4.49□□□□□ -1.69
SH3D19-204ENST00000427414 H1FX-AS1Q4G0G2 97 aa4.47□□□□□ -1.69
SH3D19-204ENST00000427414 HERC2O95714 4834 aa4.47□□□□□ -1.69
SH3D19-204ENST00000427414 LCE2BO14633 110 aa4.47□□□□□ -1.69
SH3D19-204ENST00000427414 CRIPTQ9P021 101 aa4.47□□□□□ -1.69
SH3D19-204ENST00000427414 LCE2AQ5TA79 106 aaPredicted RBP4.46□□□□□ -1.7
SH3D19-204ENST00000427414 K7ERS5 55 aa4.44□□□□□ -1.7
SH3D19-204ENST00000427414 LRP1Q07954 4544 aaKnown RBP4.44□□□□□ -1.7
SH3D19-204ENST00000427414 COX6B2Q6YFQ2 88 aa4.44□□□□□ -1.7
SH3D19-204ENST00000427414 KRTAP3-1Q9BYR8 98 aa4.43□□□□□ -1.7
SH3D19-204ENST00000427414 ABCA13Q86UQ4 5058 aa4.37□□□□□ -1.71
SH3D19-204ENST00000427414 PCLOQ9Y6V0 5065 aa4.37□□□□□ -1.71
SH3D19-204ENST00000427414 P0C880 135 aa4.36□□□□□ -1.71
SH3D19-204ENST00000427414 MYCBP2O75592 4640 aa4.34□□□□□ -1.71
SH3D19-204ENST00000427414 DMBT1Q9UGM3 2413 aaPredicted RBP4.34□□□□□ -1.72
SH3D19-204ENST00000427414 SPINT4Q6UDR6 99 aa4.31□□□□□ -1.72
SH3D19-204ENST00000427414 A0A0D9SG42 100 aa4.3□□□□□ -1.72
SH3D19-204ENST00000427414 LUZP6Q538Z0 58 aa4.29□□□□□ -1.72
SH3D19-204ENST00000427414 MUC17Q685J3 4493 aa4.28□□□□□ -1.73
SH3D19-204ENST00000427414 KRTAP10-6P60371 365 aaPredicted RBP4.27□□□□□ -1.73
SH3D19-204ENST00000427414 KRTAP13-4Q3LI77 160 aa4.26□□□□□ -1.73
SH3D19-204ENST00000427414 S4R3F8 94 aa4.26□□□□□ -1.73
SH3D19-204ENST00000427414 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
SH3D19-204ENST00000427414 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
SH3D19-204ENST00000427414 HERC1Q15751 4861 aa4.19□□□□□ -1.74
SH3D19-204ENST00000427414 KRTAP19-2Q3LHN2 52 aa4.18□□□□□ -1.74
SH3D19-204ENST00000427414 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
SH3D19-204ENST00000427414 KRTAP4-1Q9BYQ7 146 aa4.17□□□□□ -1.74
SH3D19-204ENST00000427414 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
SH3D19-204ENST00000427414 LORP23490 312 aaPredicted RBP4.16□□□□□ -1.74
SH3D19-204ENST00000427414 KRTAP12-2P59991 146 aa4.15□□□□□ -1.75
SH3D19-204ENST00000427414 LRP2P98164 4655 aa4.13□□□□□ -1.75
SH3D19-204ENST00000427414 LPAP08519 4548 aa4.11□□□□□ -1.75
SH3D19-204ENST00000427414 KRTAP12-1P59990 96 aa4.09□□□□□ -1.75
SH3D19-204ENST00000427414 M0QZ58 72 aa4.07□□□□□ -1.76
SH3D19-204ENST00000427414 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
SH3D19-204ENST00000427414 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
SH3D19-204ENST00000427414 UBR4Q5T4S7 5183 aa3.94□□□□□ -1.78
SH3D19-204ENST00000427414 MT1HP80294 61 aa3.93□□□□□ -1.78
SH3D19-204ENST00000427414 PLAC4Q8WY50 150 aa3.92□□□□□ -1.78
SH3D19-204ENST00000427414 FLGP20930 4061 aaPredicted RBP3.91□□□□□ -1.78
SH3D19-204ENST00000427414 R4GN34 69 aa3.91□□□□□ -1.78
SH3D19-204ENST00000427414 RNF213Q63HN8 5207 aa3.85□□□□□ -1.79
SH3D19-204ENST00000427414 SPRR2GQ9BYE4 73 aa3.84□□□□□ -1.79
SH3D19-204ENST00000427414 M0R2T5 61 aa3.84□□□□□ -1.8
SH3D19-204ENST00000427414 MUC2Q02817 5179 aa3.81□□□□□ -1.8
SH3D19-204ENST00000427414 KRTAP9-8Q9BYQ0 159 aa3.81□□□□□ -1.8
SH3D19-204ENST00000427414 MT2AP02795 61 aa3.79□□□□□ -1.8
SH3D19-204ENST00000427414 PP632Q6XCG6 107 aa3.76□□□□□ -1.81
SH3D19-204ENST00000427414 KRTAP19-8Q3LI54 63 aa3.75□□□□□ -1.81
SH3D19-204ENST00000427414 MT1FP04733 61 aa3.74□□□□□ -1.81
SH3D19-204ENST00000427414 KRTAP19-1Q8IUB9 90 aa3.74□□□□□ -1.81
SH3D19-204ENST00000427414 KRTAP10-10P60014 251 aa3.73□□□□□ -1.81
SH3D19-204ENST00000427414 KRTAP9-3Q9BYQ3 159 aa3.69□□□□□ -1.82
SH3D19-204ENST00000427414 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
SH3D19-204ENST00000427414 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.82
SH3D19-204ENST00000427414 TNP1P09430 55 aa3.61□□□□□ -1.83
SH3D19-204ENST00000427414 MT1BP07438 61 aa3.59□□□□□ -1.83
SH3D19-204ENST00000427414 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
SH3D19-204ENST00000427414 KRTAP10-5P60370 271 aa3.49□□□□□ -1.85
SH3D19-204ENST00000427414 MT1XP80297 61 aa3.49□□□□□ -1.85
SH3D19-204ENST00000427414 KRTAP19-6Q3LI70 58 aa3.4□□□□□ -1.87
SH3D19-204ENST00000427414 KRTAP9-2Q9BYQ4 174 aa3.39□□□□□ -1.87
SH3D19-204ENST00000427414 LCE3AQ5TA76 89 aa3.38□□□□□ -1.87
SH3D19-204ENST00000427414 KRTAP10-12P60413 245 aa3.38□□□□□ -1.87
SH3D19-204ENST00000427414 KRTAP9-6A0A140TA67 174 aa3.37□□□□□ -1.87
SH3D19-204ENST00000427414 INE1O15225 51 aa3.36□□□□□ -1.87
SH3D19-204ENST00000427414 KRTAP8-1Q8IUC2 63 aa3.36□□□□□ -1.87
SH3D19-204ENST00000427414 FSIP2Q5CZC0 6907 aa3.34□□□□□ -1.87
SH3D19-204ENST00000427414 KRTAP19-4Q3LI73 84 aa3.31□□□□□ -1.88
SH3D19-204ENST00000427414 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
SH3D19-204ENST00000427414 CRCT1Q9UGL9 99 aa3.22□□□□□ -1.89
SH3D19-204ENST00000427414 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
SH3D19-204ENST00000427414 USH2AO75445 5202 aa3.2□□□□□ -1.9
SH3D19-204ENST00000427414 SSPOA2VEC9 5147 aa3.17□□□□□ -1.9
SH3D19-204ENST00000427414 KRTAP9-4Q9BYQ2 154 aa3.14□□□□□ -1.91
SH3D19-204ENST00000427414 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
SH3D19-204ENST00000427414 LCE5AQ5TCM9 118 aa3.13□□□□□ -1.91
SH3D19-204ENST00000427414 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
SH3D19-204ENST00000427414 KRTAP4-8A0A0G2JLE6 195 aa3.08□□□□□ -1.92
SH3D19-204ENST00000427414 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
SH3D19-204ENST00000427414 KRTAP4-8Q9BYQ9 185 aa3.08□□□□□ -1.92
SH3D19-204ENST00000427414 LCE4AQ5TA78 99 aa3.08□□□□□ -1.92
SH3D19-204ENST00000427414 MT1EP04732 61 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms