RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 DNAH3Q8TD57 4116 aa1.42□□□□□ -2.18
NEB-209ENST00000427231 MEGF8Q7Z7M0 2845 aa1.41□□□□□ -2.18
NEB-209ENST00000427231 ZNF469Q96JG9 3925 aaPredicted RBP1.41□□□□□ -2.18
NEB-209ENST00000427231 DNAH7Q8WXX0 4024 aa1.41□□□□□ -2.18
NEB-209ENST00000427231 FLGP20930 4061 aaPredicted RBP1.4□□□□□ -2.19
NEB-209ENST00000427231 INE1O15225 51 aa1.4□□□□□ -2.19
NEB-209ENST00000427231 KRTAP10-1P60331 282 aa1.4□□□□□ -2.19
NEB-209ENST00000427231 Q5VSD8 79 aa1.4□□□□□ -2.19
NEB-209ENST00000427231 PRKDCP78527 4128 aaKnown RBP1.39□□□□□ -2.19
NEB-209ENST00000427231 HECTD4Q9Y4D8 3996 aa1.39□□□□□ -2.19
NEB-209ENST00000427231 LRP1Q07954 4544 aaKnown RBP1.38□□□□□ -2.19
NEB-209ENST00000427231 KRTAP15-1Q3LI76 137 aa1.38□□□□□ -2.19
NEB-209ENST00000427231 COL7A1Q02388 2944 aa1.37□□□□□ -2.19
NEB-209ENST00000427231 RYR1P21817 5038 aa1.37□□□□□ -2.19
NEB-209ENST00000427231 EPPK1P58107 5090 aaKnown RBP1.37□□□□□ -2.19
NEB-209ENST00000427231 KRTAP13-3Q3SY46 172 aa1.36□□□□□ -2.19
NEB-209ENST00000427231 PKHD1L1Q86WI1 4243 aa1.36□□□□□ -2.19
NEB-209ENST00000427231 COL27A1Q8IZC6 1860 aaPredicted RBP1.36□□□□□ -2.19
NEB-209ENST00000427231 XP32Q5T750 250 aa1.35□□□□□ -2.19
NEB-209ENST00000427231 HSPG2P98160 4391 aa1.35□□□□□ -2.19
NEB-209ENST00000427231 LRP2P98164 4655 aa1.35□□□□□ -2.19
NEB-209ENST00000427231 KRTAP10-2P60368 255 aa1.34□□□□□ -2.19
NEB-209ENST00000427231 MT3P25713 68 aa1.34□□□□□ -2.2
NEB-209ENST00000427231 STARD9Q9P2P6 4700 aa1.34□□□□□ -2.2
NEB-209ENST00000427231 FAT2Q9NYQ8 4349 aa1.33□□□□□ -2.2
NEB-209ENST00000427231 RYR2Q92736 4967 aa1.33□□□□□ -2.2
NEB-209ENST00000427231 HERC1Q15751 4861 aa1.33□□□□□ -2.2
NEB-209ENST00000427231 KRTAP1-4P0C5Y4 121 aa1.32□□□□□ -2.2
NEB-209ENST00000427231 PKD1P98161 4303 aa1.32□□□□□ -2.2
NEB-209ENST00000427231 KRTAP13-4Q3LI77 160 aa1.31□□□□□ -2.2
NEB-209ENST00000427231 DNAH6Q9C0G6 4158 aa1.31□□□□□ -2.2
NEB-209ENST00000427231 KRTAP7-1Q8IUC3 87 aa1.31□□□□□ -2.2
NEB-209ENST00000427231 ALMS1Q8TCU4 4167 aa1.31□□□□□ -2.2
NEB-209ENST00000427231 KRTAP1-5Q9BYS1 174 aa1.28□□□□□ -2.2
NEB-209ENST00000427231 KRTAP12-2P59991 146 aa1.28□□□□□ -2.2
NEB-209ENST00000427231 KRTAP13-2Q52LG2 175 aa1.27□□□□□ -2.21
NEB-209ENST00000427231 MUC17Q685J3 4493 aa1.25□□□□□ -2.21
NEB-209ENST00000427231 MDN1Q9NU22 5596 aa1.25□□□□□ -2.21
NEB-209ENST00000427231 PCLOQ9Y6V0 5065 aa1.25□□□□□ -2.21
NEB-209ENST00000427231 SPRR5A0A1B0GTR4 108 aa1.25□□□□□ -2.21
NEB-209ENST00000427231 KMT2CQ8NEZ4 4911 aaKnown RBP1.24□□□□□ -2.21
NEB-209ENST00000427231 TNXBP22105 4242 aa1.23□□□□□ -2.21
NEB-209ENST00000427231 KRTAP12-1P59990 96 aa1.23□□□□□ -2.21
NEB-209ENST00000427231 KRTAP10-10P60014 251 aa1.23□□□□□ -2.21
NEB-209ENST00000427231 HYDINQ4G0P3 5121 aa1.23□□□□□ -2.21
NEB-209ENST00000427231 ABCA13Q86UQ4 5058 aa1.22□□□□□ -2.21
NEB-209ENST00000427231 A0A1B0GVY2 172 aa1.22□□□□□ -2.21
NEB-209ENST00000427231 KRTAP3-1Q9BYR8 98 aa1.22□□□□□ -2.21
NEB-209ENST00000427231 LPAP08519 4548 aa1.22□□□□□ -2.21
NEB-209ENST00000427231 PKHD1P08F94 4074 aa1.21□□□□□ -2.22
NEB-209ENST00000427231 LORP23490 312 aaPredicted RBP1.21□□□□□ -2.22
NEB-209ENST00000427231 SYNE2Q8WXH0 6885 aaKnown RBP1.2□□□□□ -2.22
NEB-209ENST00000427231 UBR4Q5T4S7 5183 aa1.19□□□□□ -2.22
NEB-209ENST00000427231 KRTAP10-6P60371 365 aaPredicted RBP1.19□□□□□ -2.22
NEB-209ENST00000427231 FSIP2Q5CZC0 6907 aa1.18□□□□□ -2.22
NEB-209ENST00000427231 GPR98Q8WXG9 6306 aa1.18□□□□□ -2.22
NEB-209ENST00000427231 KRTAP3-2Q9BYR7 98 aa1.18□□□□□ -2.22
NEB-209ENST00000427231 MACF1Q9UPN3 7388 aaKnown RBP1.18□□□□□ -2.22
NEB-209ENST00000427231 RNF213Q63HN8 5207 aa1.16□□□□□ -2.22
NEB-209ENST00000427231 MUC2Q02817 5179 aa1.16□□□□□ -2.22
NEB-209ENST00000427231 KIAA1109Q2LD37 5005 aa1.16□□□□□ -2.22
NEB-209ENST00000427231 FAT4Q6V0I7 4981 aa1.16□□□□□ -2.22
NEB-209ENST00000427231 KRTAP4-5Q9BYR2 181 aa1.14□□□□□ -2.23
NEB-209ENST00000427231 HMCN2Q8NDA2 5059 aa1.14□□□□□ -2.23
NEB-209ENST00000427231 SPRR2GQ9BYE4 73 aa1.13□□□□□ -2.23
NEB-209ENST00000427231 HMCN1Q96RW7 5635 aa1.11□□□□□ -2.23
NEB-209ENST00000427231 KRTAP3-3Q9BYR6 98 aa1.11□□□□□ -2.23
NEB-209ENST00000427231 MUC12Q9UKN1 5478 aa1.09□□□□□ -2.23
NEB-209ENST00000427231 MT1HL1P0DM35 61 aa1.09□□□□□ -2.23
NEB-209ENST00000427231 FCGBPQ9Y6R7 5405 aaPredicted RBP1.09□□□□□ -2.24
NEB-209ENST00000427231 KRTAP8-1Q8IUC2 63 aa1.09□□□□□ -2.24
NEB-209ENST00000427231 KRTAP10-12P60413 245 aa1.08□□□□□ -2.24
NEB-209ENST00000427231 DSTQ03001 7570 aaKnown RBP1.08□□□□□ -2.24
NEB-209ENST00000427231 KRTAP10-4P60372 401 aaPredicted RBP1.08□□□□□ -2.24
NEB-209ENST00000427231 KRTAP10-5P60370 271 aa1.07□□□□□ -2.24
NEB-209ENST00000427231 KRTAP17-1Q9BYP8 105 aa1.06□□□□□ -2.24
NEB-209ENST00000427231 KRTAP12-3P60328 96 aa1.06□□□□□ -2.24
NEB-209ENST00000427231 CRCT1Q9UGL9 99 aa1.05□□□□□ -2.24
NEB-209ENST00000427231 KMT2DO14686 5537 aa1.05□□□□□ -2.24
NEB-209ENST00000427231 USH2AO75445 5202 aa1.04□□□□□ -2.24
NEB-209ENST00000427231 LCE3AQ5TA76 89 aa1.04□□□□□ -2.24
NEB-209ENST00000427231 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
NEB-209ENST00000427231 KRTAP10-7P60409 375 aaPredicted RBP1.01□□□□□ -2.25
NEB-209ENST00000427231 KRTAP19-8Q3LI54 63 aa1.01□□□□□ -2.25
NEB-209ENST00000427231 KRTAP2-2Q9BYT5 123 aa1□□□□□ -2.25
NEB-209ENST00000427231 SSPOA2VEC9 5147 aa1□□□□□ -2.25
NEB-209ENST00000427231 MUC5BQ9HC84 5762 aaPredicted RBP0.99□□□□□ -2.25
NEB-209ENST00000427231 MT1FP04733 61 aa0.99□□□□□ -2.25
NEB-209ENST00000427231 KRTAP12-4P60329 112 aa0.98□□□□□ -2.25
NEB-209ENST00000427231 MT1GP13640 62 aa0.98□□□□□ -2.25
NEB-209ENST00000427231 MT1LQ93083 61 aa0.98□□□□□ -2.25
NEB-209ENST00000427231 LCE3CQ5T5A8 94 aa0.97□□□□□ -2.25
NEB-209ENST00000427231 SYNE1Q8NF91 8797 aaKnown RBP0.97□□□□□ -2.25
NEB-209ENST00000427231 KRTAP9-6A0A140TA67 174 aa0.96□□□□□ -2.26
NEB-209ENST00000427231 MT1EP04732 61 aa0.96□□□□□ -2.26
NEB-209ENST00000427231 LCE2CQ5TA81 110 aa0.96□□□□□ -2.26
NEB-209ENST00000427231 NEBP20929 6669 aa0.96□□□□□ -2.26
NEB-209ENST00000427231 KRTAP9-2Q9BYQ4 174 aa0.95□□□□□ -2.26
NEB-209ENST00000427231 MT1HP80294 61 aa0.95□□□□□ -2.26
NEB-209ENST00000427231 LCE1AQ5T7P2 110 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms