RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 FAM236AA0A1B0GUQ0 79 aa8.32□□□□□ -1.08
HERC3-205ENST00000426683 FAM236BA0A1B0GV22 79 aa8.32□□□□□ -1.08
HERC3-205ENST00000426683 H3BPC8 53 aa8.3□□□□□ -1.08
HERC3-205ENST00000426683 A8MUN3 132 aa8.28□□□□□ -1.08
HERC3-205ENST00000426683 KRTAP19-1Q8IUB9 90 aa8.27□□□□□ -1.09
HERC3-205ENST00000426683 NDUFC1O43677 76 aa8.23□□□□□ -1.09
HERC3-205ENST00000426683 SMIM20Q8N5G0 67 aa8.17□□□□□ -1.1
HERC3-205ENST00000426683 FCGBPQ9Y6R7 5405 aaPredicted RBP8.16□□□□□ -1.1
HERC3-205ENST00000426683 TRAV7A0A075B6U4 112 aa8.16□□□□□ -1.1
HERC3-205ENST00000426683 KRTAP19-6Q3LI70 58 aa8.16□□□□□ -1.1
HERC3-205ENST00000426683 DMAC1Q96GE9 116 aa8.12□□□□□ -1.11
HERC3-205ENST00000426683 SPRR2GQ9BYE4 73 aa8.12□□□□□ -1.11
HERC3-205ENST00000426683 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.09□□□□□ -1.11
HERC3-205ENST00000426683 H0YAA0 97 aa8.09□□□□□ -1.11
HERC3-205ENST00000426683 CRIPTQ9P021 101 aa8.06□□□□□ -1.12
HERC3-205ENST00000426683 KRTAP19-8Q3LI54 63 aa8.04□□□□□ -1.12
HERC3-205ENST00000426683 Q5VV11 94 aa8.04□□□□□ -1.12
HERC3-205ENST00000426683 ADM2Q7Z4H4 148 aa8.03□□□□□ -1.12
HERC3-205ENST00000426683 MT1BP07438 61 aa8.02□□□□□ -1.13
HERC3-205ENST00000426683 SNURFQ9Y675 71 aa7.99□□□□□ -1.13
HERC3-205ENST00000426683 ACYP2P14621 99 aa7.96□□□□□ -1.14
HERC3-205ENST00000426683 SERP2Q8N6R1 65 aa7.95□□□□□ -1.14
HERC3-205ENST00000426683 KRTAP9-7A8MTY7 169 aa7.93□□□□□ -1.14
HERC3-205ENST00000426683 C20orf197Q8N268 126 aa7.92□□□□□ -1.14
HERC3-205ENST00000426683 MACF1Q9UPN3 7388 aaKnown RBP7.92□□□□□ -1.14
HERC3-205ENST00000426683 A6NN06 94 aa7.87□□□□□ -1.15
HERC3-205ENST00000426683 P0C880 135 aa7.87□□□□□ -1.15
HERC3-205ENST00000426683 CHKB-CPT1BH3BT56 60 aa7.84□□□□□ -1.15
HERC3-205ENST00000426683 SPANXA2-OT1Q8N9U9 137 aa7.84□□□□□ -1.15
HERC3-205ENST00000426683 SPTSSBQ8NFR3 76 aa7.83□□□□□ -1.16
HERC3-205ENST00000426683 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
HERC3-205ENST00000426683 SYNE2Q8WXH0 6885 aaKnown RBP7.82□□□□□ -1.16
HERC3-205ENST00000426683 R4GN34 69 aa7.81□□□□□ -1.16
HERC3-205ENST00000426683 KRTAP10-5P60370 271 aa7.8□□□□□ -1.16
HERC3-205ENST00000426683 COX7CP15954 63 aa7.77□□□□□ -1.17
HERC3-205ENST00000426683 M0QZ58 72 aa7.76□□□□□ -1.17
HERC3-205ENST00000426683 PLAC4Q8WY50 150 aa7.68□□□□□ -1.18
HERC3-205ENST00000426683 LINC01554Q52M75 96 aa7.65□□□□□ -1.18
HERC3-205ENST00000426683 KRTAP6-3Q3LI67 103 aa7.63□□□□□ -1.19
HERC3-205ENST00000426683 COA5Q86WW8 74 aa7.62□□□□□ -1.19
HERC3-205ENST00000426683 CYSTM1Q9H1C7 97 aa7.61□□□□□ -1.19
HERC3-205ENST00000426683 H7BZZ5 65 aa7.6□□□□□ -1.19
HERC3-205ENST00000426683 ANAPC13Q9BS18 74 aa7.59□□□□□ -1.19
HERC3-205ENST00000426683 PRO2289Q9P1D8 64 aa7.58□□□□□ -1.2
HERC3-205ENST00000426683 MT1XP80297 61 aa7.57□□□□□ -1.2
HERC3-205ENST00000426683 CCDC179H3BU77 68 aa7.43□□□□□ -1.22
HERC3-205ENST00000426683 KRTAP13-4Q3LI77 160 aa7.43□□□□□ -1.22
HERC3-205ENST00000426683 SEC61GP60059 68 aa7.42□□□□□ -1.22
HERC3-205ENST00000426683 SERP1Q9Y6X1 66 aa7.41□□□□□ -1.22
HERC3-205ENST00000426683 KRTAP5-9P26371 169 aa7.35□□□□□ -1.23
HERC3-205ENST00000426683 NEBP20929 6669 aa7.34□□□□□ -1.23
HERC3-205ENST00000426683 KRTAP12-2P59991 146 aa7.34□□□□□ -1.23
HERC3-205ENST00000426683 MUC12Q9UKN1 5478 aa7.34□□□□□ -1.23
HERC3-205ENST00000426683 KMT2DO14686 5537 aa7.32□□□□□ -1.24
HERC3-205ENST00000426683 A0A1B0GU33 70 aa7.28□□□□□ -1.24
HERC3-205ENST00000426683 ATP5EP56381 51 aaPredicted RBP7.27□□□□□ -1.25
HERC3-205ENST00000426683 SPATA8Q6RVD6 105 aa7.26□□□□□ -1.25
HERC3-205ENST00000426683 A0A0D9SG42 100 aa7.24□□□□□ -1.25
HERC3-205ENST00000426683 A0A1B0GU69 56 aa7.24□□□□□ -1.25
HERC3-205ENST00000426683 KRTAP10-7P60409 375 aaPredicted RBP7.24□□□□□ -1.25
HERC3-205ENST00000426683 KRTAP8-1Q8IUC2 63 aa7.23□□□□□ -1.25
HERC3-205ENST00000426683 CAMK2N1Q7Z7J9 78 aa7.22□□□□□ -1.25
HERC3-205ENST00000426683 KRTAP4-8A0A0G2JLE6 195 aa7.19□□□□□ -1.26
HERC3-205ENST00000426683 SPRR2FQ96RM1 72 aa7.19□□□□□ -1.26
HERC3-205ENST00000426683 KRTAP4-8Q9BYQ9 185 aa7.19□□□□□ -1.26
HERC3-205ENST00000426683 KRTAP10-12P60413 245 aa7.18□□□□□ -1.26
HERC3-205ENST00000426683 TMEM258P61165 79 aa7.15□□□□□ -1.26
HERC3-205ENST00000426683 MDN1Q9NU22 5596 aa7.14□□□□□ -1.27
HERC3-205ENST00000426683 SPINT4Q6UDR6 99 aa7.13□□□□□ -1.27
HERC3-205ENST00000426683 KRTAP12-1P59990 96 aa7.08□□□□□ -1.28
HERC3-205ENST00000426683 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
HERC3-205ENST00000426683 PRR15LQ9BU68 103 aa7.07□□□□□ -1.28
HERC3-205ENST00000426683 SPRR2EP22531 72 aa7.05□□□□□ -1.28
HERC3-205ENST00000426683 SPRR2BP35325 72 aa7.05□□□□□ -1.28
HERC3-205ENST00000426683 SPRR2AP35326 72 aa7.05□□□□□ -1.28
HERC3-205ENST00000426683 LINC01558Q9Y6Z2 57 aa7.04□□□□□ -1.28
HERC3-205ENST00000426683 A8MU10 97 aa7.02□□□□□ -1.29
HERC3-205ENST00000426683 KRTAP20-1Q3LI63 56 aa6.98□□□□□ -1.29
HERC3-205ENST00000426683 LCE1AQ5T7P2 110 aa6.97□□□□□ -1.29
HERC3-205ENST00000426683 KRTAP2-3P0C7H8 128 aa6.84□□□□□ -1.31
HERC3-205ENST00000426683 KRTAP2-4Q9BYR9 128 aa6.84□□□□□ -1.31
HERC3-205ENST00000426683 UQCR11O14957 56 aa6.83□□□□□ -1.32
HERC3-205ENST00000426683 SPRR2DP22532 72 aa6.81□□□□□ -1.32
HERC3-205ENST00000426683 KRTAP19-7Q3SYF9 63 aa6.76□□□□□ -1.33
HERC3-205ENST00000426683 C10orf95Q9H7T3 257 aa6.76□□□□□ -1.33
HERC3-205ENST00000426683 V9GYY9 64 aa6.74□□□□□ -1.33
HERC3-205ENST00000426683 MIR22HGQ0VDD5 57 aa6.71□□□□□ -1.34
HERC3-205ENST00000426683 MT1EP04732 61 aa6.7□□□□□ -1.34
HERC3-205ENST00000426683 TNP1P09430 55 aa6.7□□□□□ -1.34
HERC3-205ENST00000426683 PSPHP1O15172 72 aa6.69□□□□□ -1.34
HERC3-205ENST00000426683 Q1T7F1 81 aa6.69□□□□□ -1.34
HERC3-205ENST00000426683 KRTAP19-5Q3LI72 72 aa6.65□□□□□ -1.34
HERC3-205ENST00000426683 KRTAP2-2Q9BYT5 123 aa6.64□□□□□ -1.35
HERC3-205ENST00000426683 KRTAP2-1Q9BYU5 128 aa6.64□□□□□ -1.35
HERC3-205ENST00000426683 PCP4P48539 62 aa6.61□□□□□ -1.35
HERC3-205ENST00000426683 LCE3AQ5TA76 89 aa6.6□□□□□ -1.35
HERC3-205ENST00000426683 LCE3BQ5TA77 95 aa6.6□□□□□ -1.35
HERC3-205ENST00000426683 KRTAP19-3Q7Z4W3 81 aa6.6□□□□□ -1.35
HERC3-205ENST00000426683 LCE5AQ5TCM9 118 aa6.59□□□□□ -1.35
HERC3-205ENST00000426683 K7ERS5 55 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms