RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 R4GN34 69 aa5.24□□□□□ -1.57
CTCFL-206ENST00000426658 M0QZ58 72 aa5.24□□□□□ -1.57
CTCFL-206ENST00000426658 DNAH5Q8TE73 4624 aa5.24□□□□□ -1.57
CTCFL-206ENST00000426658 A0A1B0GVY2 172 aa5.23□□□□□ -1.57
CTCFL-206ENST00000426658 NDUFAF8A1L188 74 aa5.23□□□□□ -1.57
CTCFL-206ENST00000426658 XP32Q5T750 250 aa5.23□□□□□ -1.57
CTCFL-206ENST00000426658 FAT1Q14517 4588 aa5.2□□□□□ -1.58
CTCFL-206ENST00000426658 KRTAP10-8P60410 259 aa5.18□□□□□ -1.58
CTCFL-206ENST00000426658 KRTAP3-3Q9BYR6 98 aa5.18□□□□□ -1.58
CTCFL-206ENST00000426658 VPS13BQ7Z7G8 4022 aa5.17□□□□□ -1.58
CTCFL-206ENST00000426658 CAMK2N1Q7Z7J9 78 aa5.17□□□□□ -1.58
CTCFL-206ENST00000426658 KRTAP3-2Q9BYR7 98 aa5.16□□□□□ -1.58
CTCFL-206ENST00000426658 KRTAP4-5Q9BYR2 181 aa5.16□□□□□ -1.58
CTCFL-206ENST00000426658 KRTAP12-2P59991 146 aa5.15□□□□□ -1.58
CTCFL-206ENST00000426658 KRTAP10-4P60372 401 aaPredicted RBP5.1□□□□□ -1.59
CTCFL-206ENST00000426658 MYCBP2O75592 4640 aa5.09□□□□□ -1.59
CTCFL-206ENST00000426658 KRTAP12-1P59990 96 aa5.08□□□□□ -1.6
CTCFL-206ENST00000426658 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
CTCFL-206ENST00000426658 SACSQ9NZJ4 4579 aa5.04□□□□□ -1.6
CTCFL-206ENST00000426658 KMT2CQ8NEZ4 4911 aaKnown RBP5.04□□□□□ -1.6
CTCFL-206ENST00000426658 HYDINQ4G0P3 5121 aa5.04□□□□□ -1.6
CTCFL-206ENST00000426658 PKD1P98161 4303 aa5.02□□□□□ -1.61
CTCFL-206ENST00000426658 DYNC1H1Q14204 4646 aaKnown RBP5.02□□□□□ -1.61
CTCFL-206ENST00000426658 LUZP6Q538Z0 58 aa5.01□□□□□ -1.61
CTCFL-206ENST00000426658 KIAA1109Q2LD37 5005 aa5□□□□□ -1.61
CTCFL-206ENST00000426658 FAT2Q9NYQ8 4349 aa5□□□□□ -1.61
CTCFL-206ENST00000426658 PKHD1P08F94 4074 aa4.99□□□□□ -1.61
CTCFL-206ENST00000426658 RYR2Q92736 4967 aa4.98□□□□□ -1.61
CTCFL-206ENST00000426658 RYR1P21817 5038 aa4.96□□□□□ -1.62
CTCFL-206ENST00000426658 LRP1Q07954 4544 aaKnown RBP4.95□□□□□ -1.62
CTCFL-206ENST00000426658 PLAC4Q8WY50 150 aa4.92□□□□□ -1.62
CTCFL-206ENST00000426658 FAT3Q8TDW7 4589 aa4.91□□□□□ -1.62
CTCFL-206ENST00000426658 RYR3Q15413 4870 aa4.91□□□□□ -1.62
CTCFL-206ENST00000426658 KRTAP10-10P60014 251 aa4.89□□□□□ -1.63
CTCFL-206ENST00000426658 MT1HL1P0DM35 61 aa4.86□□□□□ -1.63
CTCFL-206ENST00000426658 APOBP04114 4563 aaKnown RBP4.85□□□□□ -1.63
CTCFL-206ENST00000426658 PKHD1L1Q86WI1 4243 aa4.83□□□□□ -1.64
CTCFL-206ENST00000426658 EPPK1P58107 5090 aaKnown RBP4.78□□□□□ -1.64
CTCFL-206ENST00000426658 PP632Q6XCG6 107 aa4.77□□□□□ -1.65
CTCFL-206ENST00000426658 LORP23490 312 aaPredicted RBP4.74□□□□□ -1.65
CTCFL-206ENST00000426658 HSPG2P98160 4391 aa4.74□□□□□ -1.65
CTCFL-206ENST00000426658 TNP1P09430 55 aa4.73□□□□□ -1.65
CTCFL-206ENST00000426658 LRP2P98164 4655 aa4.72□□□□□ -1.65
CTCFL-206ENST00000426658 PCLOQ9Y6V0 5065 aa4.7□□□□□ -1.66
CTCFL-206ENST00000426658 KRTAP17-1Q9BYP8 105 aa4.7□□□□□ -1.66
CTCFL-206ENST00000426658 BIRC6Q9NR09 4857 aa4.66□□□□□ -1.66
CTCFL-206ENST00000426658 TNXBP22105 4242 aa4.65□□□□□ -1.67
CTCFL-206ENST00000426658 HERC2O95714 4834 aa4.64□□□□□ -1.67
CTCFL-206ENST00000426658 KRTAP4-1Q9BYQ7 146 aa4.57□□□□□ -1.68
CTCFL-206ENST00000426658 LPAP08519 4548 aa4.57□□□□□ -1.68
CTCFL-206ENST00000426658 ABCA13Q86UQ4 5058 aa4.52□□□□□ -1.69
CTCFL-206ENST00000426658 FSIP2Q5CZC0 6907 aa4.51□□□□□ -1.69
CTCFL-206ENST00000426658 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.7
CTCFL-206ENST00000426658 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
CTCFL-206ENST00000426658 MUC2Q02817 5179 aa4.35□□□□□ -1.71
CTCFL-206ENST00000426658 HERC1Q15751 4861 aa4.32□□□□□ -1.72
CTCFL-206ENST00000426658 RNF213Q63HN8 5207 aa4.3□□□□□ -1.72
CTCFL-206ENST00000426658 UBR4Q5T4S7 5183 aa4.3□□□□□ -1.72
CTCFL-206ENST00000426658 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
CTCFL-206ENST00000426658 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
CTCFL-206ENST00000426658 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
CTCFL-206ENST00000426658 LCE2DQ5TA82 110 aaPredicted RBP4.26□□□□□ -1.73
CTCFL-206ENST00000426658 MUC17Q685J3 4493 aa4.24□□□□□ -1.73
CTCFL-206ENST00000426658 FAT4Q6V0I7 4981 aa4.18□□□□□ -1.74
CTCFL-206ENST00000426658 MT1HP80294 61 aa4.18□□□□□ -1.74
CTCFL-206ENST00000426658 SPRR2GQ9BYE4 73 aa4.18□□□□□ -1.74
CTCFL-206ENST00000426658 HMCN2Q8NDA2 5059 aa4.16□□□□□ -1.74
CTCFL-206ENST00000426658 INE1O15225 51 aa4.14□□□□□ -1.75
CTCFL-206ENST00000426658 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
CTCFL-206ENST00000426658 KRTAP19-1Q8IUB9 90 aa4.13□□□□□ -1.75
CTCFL-206ENST00000426658 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
CTCFL-206ENST00000426658 FLGP20930 4061 aaPredicted RBP4.1□□□□□ -1.75
CTCFL-206ENST00000426658 MT1FP04733 61 aa4.1□□□□□ -1.75
CTCFL-206ENST00000426658 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
CTCFL-206ENST00000426658 MT2AP02795 61 aa4.09□□□□□ -1.75
CTCFL-206ENST00000426658 KRTAP8-1Q8IUC2 63 aa4.06□□□□□ -1.76
CTCFL-206ENST00000426658 LCE2CQ5TA81 110 aa4.03□□□□□ -1.77
CTCFL-206ENST00000426658 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
CTCFL-206ENST00000426658 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
CTCFL-206ENST00000426658 KRTAP19-8Q3LI54 63 aa3.93□□□□□ -1.78
CTCFL-206ENST00000426658 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
CTCFL-206ENST00000426658 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
CTCFL-206ENST00000426658 MT1XP80297 61 aa3.92□□□□□ -1.78
CTCFL-206ENST00000426658 KRTAP9-8Q9BYQ0 159 aa3.89□□□□□ -1.79
CTCFL-206ENST00000426658 MT1BP07438 61 aa3.88□□□□□ -1.79
CTCFL-206ENST00000426658 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.79
CTCFL-206ENST00000426658 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
CTCFL-206ENST00000426658 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
CTCFL-206ENST00000426658 KRTAP4-8A0A0G2JLE6 195 aa3.76□□□□□ -1.81
CTCFL-206ENST00000426658 KRTAP4-8Q9BYQ9 185 aa3.76□□□□□ -1.81
CTCFL-206ENST00000426658 DSTQ03001 7570 aaKnown RBP3.76□□□□□ -1.81
CTCFL-206ENST00000426658 USH2AO75445 5202 aa3.73□□□□□ -1.81
CTCFL-206ENST00000426658 KRTAP9-3Q9BYQ3 159 aa3.72□□□□□ -1.81
CTCFL-206ENST00000426658 LCE2AQ5TA79 106 aaPredicted RBP3.7□□□□□ -1.82
CTCFL-206ENST00000426658 KMT2DO14686 5537 aa3.69□□□□□ -1.82
CTCFL-206ENST00000426658 KRTAP9-2Q9BYQ4 174 aa3.69□□□□□ -1.82
CTCFL-206ENST00000426658 LCE2BO14633 110 aa3.66□□□□□ -1.82
CTCFL-206ENST00000426658 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
CTCFL-206ENST00000426658 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.82
CTCFL-206ENST00000426658 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms